RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 ZNF788Q6ZQV5 615 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 SLC36A1Q7Z2H8 476 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 CCDC190Q86UF4 302 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 SAMD12Q8N8I0 201 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 ZNRF1Q8ND25 227 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 WFDC11Q8NEX6 87 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 OR5M8Q8NGP6 311 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 OR5R1Q8NH85 324 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 RNASE8Q8TDE3 154 aaKnown RBP9.64□□□□□ -0.87
HPS4-212ENST00000481910 PTX4Q96A99 478 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 LPAR5Q9H1C0 372 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 ATG5Q9H1Y0 275 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 HIPK2Q9H2X6 1198 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 ZNF222Q9UK12 451 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 DOCK11Q5JSL3 2073 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 NKX6-3A6NJ46 265 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 SIRPB1O00241 398 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 IL13RA1P78552 427 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 DEFA5Q01523 94 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 MPV17LQ2QL34 196 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 Q6P435 159 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 PET117Q6UWS5 81 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 LINC00596Q86U02 117 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 FAM216BQ8N7L0 139 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 CLDND2Q8NHS1 167 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 DPCDQ9BVM2 203 aaPredicted RBP9.64□□□□□ -0.87
HPS4-212ENST00000481910 TM2D1Q9BX74 207 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 PATZ1Q9HBE1 687 aaKnown RBP9.64□□□□□ -0.87
HPS4-212ENST00000481910 GSKIPQ9P0R6 139 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 ZNF581Q9P0T4 197 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 KAAG1Q9UBP8 84 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 METRNQ9UJH8 293 aa9.64□□□□□ -0.87
HPS4-212ENST00000481910 IGHV4-61A0A0C4DH41 118 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 A0A1B0GV72 72 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 FAM90A10PA6NDY2 464 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 FAM90A18PA6NE21 464 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 FAM90A16PA6NEW6 464 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 FAM90A20PA6NIJ5 464 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 FAM90A8PA6NJQ4 464 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 FAM90A7PA6NKC0 464 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 FAM90A22PA8MWA6 464 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 FAM90A12PA8MX19 464 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 FAM90A5PA8MXJ8 464 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 FAM90A23PA8MXZ1 464 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 IFNA21P01568 189 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 WNT2P09544 360 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 FAM90A15PP0C7V4 464 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 FAM90A13PP0C7W8 464 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 FAM90A14PP0C7W9 464 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 FAM90A24PP0C7X0 464 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 USF1P22415 310 aaPredicted RBP9.63□□□□□ -0.87
HPS4-212ENST00000481910 LMO1P25800 156 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 BLVRBP30043 206 aaPredicted RBP9.63□□□□□ -0.87
HPS4-212ENST00000481910 DUX4L9Q6RFH8 374 aaPredicted RBP9.63□□□□□ -0.87
HPS4-212ENST00000481910 CHST4Q8NCG5 386 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 OR8B3Q8NGG8 313 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 SDSLQ96GA7 329 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 GAFA1Q96PS6 74 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 OR8B2Q96RD0 313 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 LPAR2Q9HBW0 351 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 MGAT4CQ9UBM8 478 aa9.63□□□□□ -0.87
HPS4-212ENST00000481910 FABP12A6NFH5 140 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 RNF223E7ERA6 249 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 HSPB6O14558 160 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 SOCS1O15524 211 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 NDUFB3O43676 98 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 PSPNO60542 156 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 RPS20P60866 119 aaKnown RBP9.62□□□□□ -0.87
HPS4-212ENST00000481910 RBMS2Q15434 407 aaKnown RBP9.62□□□□□ -0.87
HPS4-212ENST00000481910 UBE2NLQ5JXB2 153 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 FAM74A1Q5RGS3 127 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 C15orf54Q8N8G6 183 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 DUSP18Q8NEJ0 188 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 TMEM185AQ8NFB2 350 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 OR56B1Q8NGI3 324 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 C2CD4CQ8TF44 421 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 SLC25A38Q96DW6 304 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 NEIL1Q96FI4 390 aaPredicted RBP9.62□□□□□ -0.87
HPS4-212ENST00000481910 NEDD4LQ96PU5 975 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.62□□□□□ -0.87
HPS4-212ENST00000481910 CTSZQ9UBR2 303 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 A0A0A6YYD4 124 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 TRAV24A0A0B4J272 114 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 TMEM218A2RU14 115 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 SLC33A1O00400 549 aaPredicted RBP9.62□□□□□ -0.87
HPS4-212ENST00000481910 DVL1O14640 695 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 FUT3P21217 361 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 LMO4P61968 165 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 LRRC10Q5BKY1 277 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 NKAPLQ5M9Q1 402 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 CMTM4Q8IZR5 234 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 BPIFB2Q8N4F0 458 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 SUMF2Q8NBJ7 301 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 RAB39BQ96DA2 213 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 S100A16Q96FQ6 103 aaKnown RBP9.62□□□□□ -0.87
HPS4-212ENST00000481910 SNX22Q96L94 193 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 CHST6Q9GZX3 395 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 ABCG5Q9H222 651 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 PLEKHJ1Q9NW61 149 aa9.62□□□□□ -0.87
HPS4-212ENST00000481910 SLC25A10Q9UBX3 287 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms