RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 ZNF787Q6DD87 383 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 NR2C2APQ86WQ0 139 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 RPS10P5Q9NQ39 176 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 KCNIP4Q6PIL6 250 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 ZNF474Q6S9Z5 364 aaPredicted RBP16.31■□□□□ 0.2
CCM2-214ENST00000481194 WDR31Q8NA23 367 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 ACY3Q96HD9 319 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 SOSTQ9BQB4 213 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 LINC00312Q9Y6C7 94 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 BVESQ8NE79 360 aa16.3■□□□□ 0.2
CCM2-214ENST00000481194 MISP3Q96FF7 219 aa16.3■□□□□ 0.2
CCM2-214ENST00000481194 CXorf58Q96LI9 332 aa16.3■□□□□ 0.2
CCM2-214ENST00000481194 GPR179Q6PRD1 2367 aa16.3■□□□□ 0.2
CCM2-214ENST00000481194 A0A1W2PNU3 283 aaPredicted RBP16.3■□□□□ 0.2
CCM2-214ENST00000481194 M0QZ24 198 aa16.3■□□□□ 0.2
CCM2-214ENST00000481194 FAM106CPP0CH98 169 aa16.3■□□□□ 0.2
CCM2-214ENST00000481194 GNLYP22749 145 aa16.3■□□□□ 0.2
CCM2-214ENST00000481194 UBAC2Q8NBM4 344 aa16.3■□□□□ 0.2
CCM2-214ENST00000481194 LGALS7P47929 136 aa16.3■□□□□ 0.2
CCM2-214ENST00000481194 SULT1A1P50225 295 aa16.3■□□□□ 0.2
CCM2-214ENST00000481194 NIPSNAP3BQ9BS92 247 aa16.3■□□□□ 0.2
CCM2-214ENST00000481194 TRIM77I1YAP6 450 aa16.29■□□□□ 0.2
CCM2-214ENST00000481194 LSM10Q969L4 123 aaKnown RBP16.29■□□□□ 0.2
CCM2-214ENST00000481194 CHST1O43916 411 aa16.29■□□□□ 0.2
CCM2-214ENST00000481194 UBE2KP61086 200 aa16.29■□□□□ 0.2
CCM2-214ENST00000481194 SDHCQ99643 169 aaPredicted RBP16.29■□□□□ 0.2
CCM2-214ENST00000481194 GFI1Q99684 422 aa16.29■□□□□ 0.2
CCM2-214ENST00000481194 HTR1DP28221 377 aa16.29■□□□□ 0.2
CCM2-214ENST00000481194 C20orf204Q6ZNR8 217 aa16.29■□□□□ 0.2
CCM2-214ENST00000481194 ABHD12Q8N2K0 398 aa16.29■□□□□ 0.2
CCM2-214ENST00000481194 FBXL17Q9UF56 701 aa16.29■□□□□ 0.2
CCM2-214ENST00000481194 SNRNP200O75643 2136 aaKnown RBP16.29■□□□□ 0.2
CCM2-214ENST00000481194 IGHV1-46P01743 117 aa16.29■□□□□ 0.2
CCM2-214ENST00000481194 FAM122CQ6P4D5 195 aa16.29■□□□□ 0.2
CCM2-214ENST00000481194 IL34Q6ZMJ4 242 aa16.29■□□□□ 0.2
CCM2-214ENST00000481194 OR1L4Q8NGR5 311 aa16.29■□□□□ 0.2
CCM2-214ENST00000481194 MRPL30Q8TCC3 161 aaKnown RBP16.29■□□□□ 0.2
CCM2-214ENST00000481194 MAP1BP46821 2468 aaKnown RBP16.29■□□□□ 0.2
CCM2-214ENST00000481194 CXCL3P19876 107 aa16.28■□□□□ 0.2
CCM2-214ENST00000481194 RSRP1Q9BUV0 290 aa16.28■□□□□ 0.2
CCM2-214ENST00000481194 SSBP3Q9BWW4 388 aaPredicted RBP16.28■□□□□ 0.2
CCM2-214ENST00000481194 Q56UQ5 140 aa16.28■□□□□ 0.2
CCM2-214ENST00000481194 ACSM6Q6P461 480 aa16.28■□□□□ 0.2
CCM2-214ENST00000481194 C5orf66Q9H5L9 145 aa16.28■□□□□ 0.2
CCM2-214ENST00000481194 OR1A1Q9P1Q5 309 aa16.28■□□□□ 0.2
CCM2-214ENST00000481194 OR51B2Q9Y5P1 312 aa16.28■□□□□ 0.2
CCM2-214ENST00000481194 TMEM65Q6PI78 240 aa16.28■□□□□ 0.2
CCM2-214ENST00000481194 PAQR4Q8N4S7 273 aaPredicted RBP16.28■□□□□ 0.2
CCM2-214ENST00000481194 ELF5Q9UKW6 265 aaPredicted RBP16.28■□□□□ 0.2
CCM2-214ENST00000481194 YIF1AO95070 293 aa16.28■□□□□ 0.2
CCM2-214ENST00000481194 CD37P11049 281 aa16.28■□□□□ 0.2
CCM2-214ENST00000481194 MPZP25189 248 aa16.28■□□□□ 0.2
CCM2-214ENST00000481194 CFPP27918 469 aa16.28■□□□□ 0.2
CCM2-214ENST00000481194 KHDC1LQ5JSQ8 128 aa16.28■□□□□ 0.2
CCM2-214ENST00000481194 NCMAPQ5T1S8 102 aa16.28■□□□□ 0.2
CCM2-214ENST00000481194 H1FOOQ8IZA3 346 aaPredicted RBP16.28■□□□□ 0.2
CCM2-214ENST00000481194 C19orf12Q9NSK7 152 aa16.28■□□□□ 0.2
CCM2-214ENST00000481194 KBTBD11-OT1A0A1B0GTJ5 212 aa16.27■□□□□ 0.2
CCM2-214ENST00000481194 THBDP07204 575 aa16.27■□□□□ 0.2
CCM2-214ENST00000481194 TMEM33P57088 247 aa16.27■□□□□ 0.2
CCM2-214ENST00000481194 SLC7A5P1Q8MH63 180 aa16.27■□□□□ 0.2
CCM2-214ENST00000481194 ZNF524Q96C55 264 aa16.27■□□□□ 0.2
CCM2-214ENST00000481194 PRR13Q9NZ81 148 aa16.27■□□□□ 0.2
CCM2-214ENST00000481194 A0A1W2PRD5 423 aa16.27■□□□□ 0.2
CCM2-214ENST00000481194 A0A1W2PRF3 423 aa16.27■□□□□ 0.2
CCM2-214ENST00000481194 A0A1W2PRM7 423 aa16.27■□□□□ 0.2
CCM2-214ENST00000481194 C12orf77C9JDV5 145 aa16.27■□□□□ 0.2
CCM2-214ENST00000481194 METTL15P1P0C7V9 234 aa16.27■□□□□ 0.2
CCM2-214ENST00000481194 SPCS3P61009 180 aa16.27■□□□□ 0.2
CCM2-214ENST00000481194 CLLU1Q5K131 121 aa16.27■□□□□ 0.2
CCM2-214ENST00000481194 DHRS11Q6UWP2 260 aa16.27■□□□□ 0.2
CCM2-214ENST00000481194 AP1S3Q96PC3 154 aa16.27■□□□□ 0.2
CCM2-214ENST00000481194 DSCR9P59020 149 aa16.27■□□□□ 0.19
CCM2-214ENST00000481194 ZNRF1Q8ND25 227 aa16.27■□□□□ 0.19
CCM2-214ENST00000481194 A0A1W2PPE3 182 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 NAT1P18440 290 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 MMDQ15546 238 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 COLCA1Q6ZS62 124 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 CHAC2Q8WUX2 184 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 WT1P19544 449 aaPredicted RBP16.26■□□□□ 0.19
CCM2-214ENST00000481194 DKK4Q9UBT3 224 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 ADAMTS9Q9P2N4 1935 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 MDFIC2A0A1B0GVS7 189 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 ZNF250P15622 560 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 RAB4BP61018 213 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 MMD2Q8IY49 270 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 SELENOHQ8IZQ5 122 aaKnown RBP16.26■□□□□ 0.19
CCM2-214ENST00000481194 FAM168AQ92567 244 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 MS4A7Q9GZW8 240 aaPredicted RBP16.26■□□□□ 0.19
CCM2-214ENST00000481194 SERTAD4Q9NUC0 356 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 GAR1Q9NY12 217 aaKnown RBP16.26■□□□□ 0.19
CCM2-214ENST00000481194 A0A087WV48 116 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 TNFSF13O75888 250 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 ZNF497Q6ZNH5 498 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 C15orf54Q8N8G6 183 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 OR10A7Q8NGE5 316 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 LDLRAD4O15165 306 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 COMPP49747 757 aaPredicted RBP16.26■□□□□ 0.19
CCM2-214ENST00000481194 PCSK4Q6UW60 755 aa16.26■□□□□ 0.19
CCM2-214ENST00000481194 LCN15Q6UWW0 184 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms