RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 TOMM5Q8N4H5 51 aa6.78□□□□□ -1.32
USP54-212ENST00000480210 PLPPR1Q8TBJ4 325 aa6.78□□□□□ -1.32
USP54-212ENST00000480210 TNFRSF14Q92956 283 aa6.78□□□□□ -1.32
USP54-212ENST00000480210 NARS2Q96I59 477 aaKnown RBP6.78□□□□□ -1.32
USP54-212ENST00000480210 ARHGAP5-AS1Q96IT6 56 aa6.78□□□□□ -1.32
USP54-212ENST00000480210 SMR3AQ99954 134 aa6.78□□□□□ -1.32
USP54-212ENST00000480210 SULT4A1Q9BR01 284 aa6.78□□□□□ -1.32
USP54-212ENST00000480210 OCSTAMPQ9BR26 566 aa6.78□□□□□ -1.32
USP54-212ENST00000480210 THAP7Q9BT49 309 aaPredicted RBP6.78□□□□□ -1.32
USP54-212ENST00000480210 MIXL1Q9H2W2 232 aa6.78□□□□□ -1.32
USP54-212ENST00000480210 GSX1Q9H4S2 264 aaPredicted RBP6.78□□□□□ -1.32
USP54-212ENST00000480210 COMMD3Q9UBI1 195 aa6.78□□□□□ -1.32
USP54-212ENST00000480210 CBY1Q9Y3M2 126 aa6.78□□□□□ -1.32
USP54-212ENST00000480210 A0A087X0M5 115 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 A0A1B0GX30 115 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 TMEM218A2RU14 115 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 DBX1A6NMT0 343 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 MFNGO00587 321 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 HSPB6O14558 160 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 CRLF1O75462 422 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 NAPSAO96009 420 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 FSHBP01225 129 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 IFNA10P01566 189 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 IGHV1-8P0DP01 117 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 DTYMKP23919 212 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 CD34P28906 385 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 FAUP35544 74 aaKnown RBP6.77□□□□□ -1.33
USP54-212ENST00000480210 KIR2DS4P43632 304 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 EFNB2P52799 333 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 PRRX1P54821 245 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 TSPAN5P62079 268 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 HTD2P86397 168 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 ARFRP1Q13795 201 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 KIR2DS1Q14954 304 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 HMGN3Q15651 99 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 ZNF260Q3ZCT1 412 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 MIDNQ504T8 468 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 PLAC9Q5JTB6 97 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 Q6ZS49 121 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 C9orf139Q6ZV77 190 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 VMO1Q7Z5L0 202 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 FGFRL1Q8N441 504 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 C11orf42Q8N5U0 333 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 Q8N7P7 452 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 TPRX1Q8N7U7 411 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 SAMD12Q8N8I0 201 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 OR2T35Q8NGX2 323 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 ZNF596Q8TC21 504 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 MRPL30Q8TCC3 161 aaKnown RBP6.77□□□□□ -1.33
USP54-212ENST00000480210 FAM216AQ8WUB2 273 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 LINC00052Q96N35 136 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 TBX15Q96SF7 602 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 PCGF1Q9BSM1 259 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 KCNK15Q9H427 330 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 CHMP1AQ9HD42 196 aaPredicted RBP6.77□□□□□ -1.33
USP54-212ENST00000480210 CALYQ9NYX4 217 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 IDI2-AS1Q9NZ38 188 aa6.77□□□□□ -1.33
USP54-212ENST00000480210 TRAV18A0A075B6X5 111 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 IGHV1-69DA0A0B4J2H0 117 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 CENPVL3A0A0U1RRI6 287 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 DNASE2O00115 360 aaPredicted RBP6.76□□□□□ -1.33
USP54-212ENST00000480210 F2RL2O00254 374 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 CREBL2O60519 120 aaPredicted RBP6.76□□□□□ -1.33
USP54-212ENST00000480210 OR2A4O95047 310 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 AVPP01185 164 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 IFNA2P01563 188 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 IGHV1-69P01742 117 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 APOC3P02656 99 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 NMBP08949 121 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 CTXN2P0C2S0 81 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 FAM157CP0CG43 387 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 GNB3P16520 340 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 CCL3L1P16619 93 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 SRD5A1P18405 259 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 BTF3P20290 206 aaKnown RBP6.76□□□□□ -1.33
USP54-212ENST00000480210 MECP2P51608 486 aaKnown RBP6.76□□□□□ -1.33
USP54-212ENST00000480210 ARHGDIBP52566 201 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 LGALS4P56470 323 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 EIF5AP63241 154 aaKnown RBP6.76□□□□□ -1.33
USP54-212ENST00000480210 C17orf58Q2M2W7 97 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 MOGAT2Q3SYC2 334 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 TMEM69Q5SWH9 247 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 DHRS7BQ6IAN0 325 aaPredicted RBP6.76□□□□□ -1.33
USP54-212ENST00000480210 BRICD5Q6PL45 260 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 C8orf31Q8N9H6 132 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 DMBX1Q8NFW5 382 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 OR11H6Q8NGC7 330 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 OR13A1Q8NGR1 328 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 OR4K15Q8NH41 348 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 MRGPRDQ8TDS7 321 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 GLYATL2Q8WU03 294 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 SFT2D1Q8WV19 159 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 TCTEX1D2Q8WW35 142 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 ARL11Q969Q4 196 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 GALMQ96C23 342 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 SLC25A38Q96DW6 304 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 RBM14Q96PK6 669 aaKnown RBP6.76□□□□□ -1.33
USP54-212ENST00000480210 OR2A7Q96R45 310 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 CLEC7AQ9BXN2 247 aa6.76□□□□□ -1.33
USP54-212ENST00000480210 MS4A7Q9GZW8 240 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms