RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 FOXB2Q5VYV0 432 aa15.87■□□□□ 0.13
LIME1-205ENST00000480139 ZNF833PQ6ZTB9 187 aa15.87■□□□□ 0.13
LIME1-205ENST00000480139 H1FOOQ8IZA3 346 aaPredicted RBP15.87■□□□□ 0.13
LIME1-205ENST00000480139 CFHR4Q92496 578 aa15.87■□□□□ 0.13
LIME1-205ENST00000480139 GCDHQ92947 438 aaPredicted RBP15.87■□□□□ 0.13
LIME1-205ENST00000480139 SNAPC3Q92966 411 aa15.87■□□□□ 0.13
LIME1-205ENST00000480139 RAB18Q9NP72 206 aa15.87■□□□□ 0.13
LIME1-205ENST00000480139 TNFRSF19Q9NS68 423 aa15.87■□□□□ 0.13
LIME1-205ENST00000480139 SAA2-SAA4A0A096LPE2 208 aa15.86■□□□□ 0.13
LIME1-205ENST00000480139 A6NDX4 124 aa15.86■□□□□ 0.13
LIME1-205ENST00000480139 FAM90A9PA6NNJ1 464 aa15.86■□□□□ 0.13
LIME1-205ENST00000480139 TIMM23O14925 209 aa15.86■□□□□ 0.13
LIME1-205ENST00000480139 ST8SIA5O15466 376 aa15.86■□□□□ 0.13
LIME1-205ENST00000480139 SAA2P0DJI9 122 aaPredicted RBP15.86■□□□□ 0.13
LIME1-205ENST00000480139 RAB13P51153 203 aa15.86■□□□□ 0.13
LIME1-205ENST00000480139 ARPC4P59998 168 aa15.86■□□□□ 0.13
LIME1-205ENST00000480139 THNSL2Q86YJ6 484 aa15.86■□□□□ 0.13
LIME1-205ENST00000480139 TGIF2LXQ8IUE1 241 aa15.86■□□□□ 0.13
LIME1-205ENST00000480139 DIRAS2Q96HU8 199 aa15.86■□□□□ 0.13
LIME1-205ENST00000480139 FBN1P35555 2871 aaKnown RBP15.85■□□□□ 0.13
LIME1-205ENST00000480139 MEIS3P1A6NDR6 274 aa15.85■□□□□ 0.13
LIME1-205ENST00000480139 FAM181BA6NEQ2 426 aa15.85■□□□□ 0.13
LIME1-205ENST00000480139 MRPS10P82664 201 aaKnown RBP15.85■□□□□ 0.13
LIME1-205ENST00000480139 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.85■□□□□ 0.13
LIME1-205ENST00000480139 OR5AP2Q8NGF4 316 aa15.85■□□□□ 0.13
LIME1-205ENST00000480139 ABHD1Q96SE0 405 aa15.85■□□□□ 0.13
LIME1-205ENST00000480139 S1PR3Q99500 378 aa15.85■□□□□ 0.13
LIME1-205ENST00000480139 ZNF251Q9BRH9 671 aa15.85■□□□□ 0.13
LIME1-205ENST00000480139 NECAP2Q9NVZ3 263 aa15.85■□□□□ 0.13
LIME1-205ENST00000480139 FAM106CPP0CH98 169 aa15.84■□□□□ 0.13
LIME1-205ENST00000480139 REG1BP48304 166 aa15.84■□□□□ 0.13
LIME1-205ENST00000480139 LY6EQ16553 131 aa15.84■□□□□ 0.13
LIME1-205ENST00000480139 PYHIN1Q6K0P9 492 aa15.84■□□□□ 0.13
LIME1-205ENST00000480139 DRAM1Q8N682 238 aa15.84■□□□□ 0.13
LIME1-205ENST00000480139 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.84■□□□□ 0.13
LIME1-205ENST00000480139 OR56B4Q8NH76 319 aa15.84■□□□□ 0.13
LIME1-205ENST00000480139 C19orf24Q9BVV8 132 aa15.84■□□□□ 0.13
LIME1-205ENST00000480139 GAB2Q9UQC2 676 aa15.84■□□□□ 0.13
LIME1-205ENST00000480139 A6NHS1 94 aa15.83■□□□□ 0.12
LIME1-205ENST00000480139 RNF212BA8MTL3 300 aa15.83■□□□□ 0.12
LIME1-205ENST00000480139 CTDSPLO15194 276 aa15.83■□□□□ 0.12
LIME1-205ENST00000480139 TUSC2O75896 110 aa15.83■□□□□ 0.12
LIME1-205ENST00000480139 CRYBA1P05813 215 aa15.83■□□□□ 0.12
LIME1-205ENST00000480139 HKR1P10072 659 aa15.83■□□□□ 0.12
LIME1-205ENST00000480139 TNFSF8P32971 234 aa15.83■□□□□ 0.12
LIME1-205ENST00000480139 RCVRNP35243 200 aa15.83■□□□□ 0.12
LIME1-205ENST00000480139 OR3A3P47888 321 aa15.83■□□□□ 0.12
LIME1-205ENST00000480139 TAS2R46P59540 309 aa15.83■□□□□ 0.12
LIME1-205ENST00000480139 EBI3Q14213 229 aa15.83■□□□□ 0.12
LIME1-205ENST00000480139 CCBE1Q6UXH8 406 aaPredicted RBP15.83■□□□□ 0.12
LIME1-205ENST00000480139 C16orf82Q7Z2V1 217 aa15.83■□□□□ 0.12
LIME1-205ENST00000480139 ABHD14BQ96IU4 210 aa15.83■□□□□ 0.12
LIME1-205ENST00000480139 ZNF221Q9UK13 617 aa15.83■□□□□ 0.12
LIME1-205ENST00000480139 OR2W1Q9Y3N9 320 aa15.83■□□□□ 0.12
LIME1-205ENST00000480139 GABARAPH6UMI1 98 aa15.82■□□□□ 0.12
LIME1-205ENST00000480139 CHST1O43916 411 aa15.82■□□□□ 0.12
LIME1-205ENST00000480139 SNRNP70P08621 437 aaKnown RBP15.82■□□□□ 0.12
LIME1-205ENST00000480139 OR8U9P0C7N5 309 aa15.82■□□□□ 0.12
LIME1-205ENST00000480139 CD1BP29016 333 aa15.82■□□□□ 0.12
LIME1-205ENST00000480139 S100A5P33763 92 aa15.82■□□□□ 0.12
LIME1-205ENST00000480139 GPR12P47775 334 aa15.82■□□□□ 0.12
LIME1-205ENST00000480139 ACTBP60709 375 aa15.82■□□□□ 0.12
LIME1-205ENST00000480139 ACTG1P63261 375 aa15.82■□□□□ 0.12
LIME1-205ENST00000480139 CDK10Q15131 360 aa15.82■□□□□ 0.12
LIME1-205ENST00000480139 DHRS7BQ6IAN0 325 aaPredicted RBP15.82■□□□□ 0.12
LIME1-205ENST00000480139 MOB3BQ86TA1 216 aa15.82■□□□□ 0.12
LIME1-205ENST00000480139 OR8U1Q8NH10 309 aa15.82■□□□□ 0.12
LIME1-205ENST00000480139 SOSTQ9BQB4 213 aa15.82■□□□□ 0.12
LIME1-205ENST00000480139 COL6A5A8TX70 2615 aa15.82■□□□□ 0.12
LIME1-205ENST00000480139 TMEM89A2RUT3 159 aa15.81■□□□□ 0.12
LIME1-205ENST00000480139 NDUFA7O95182 113 aa15.81■□□□□ 0.12
LIME1-205ENST00000480139 OR5H8P0DN80 308 aa15.81■□□□□ 0.12
LIME1-205ENST00000480139 CD24P25063 80 aa15.81■□□□□ 0.12
LIME1-205ENST00000480139 SSBP1Q04837 148 aaKnown RBP15.81■□□□□ 0.12
LIME1-205ENST00000480139 LSAMPQ13449 338 aa15.81■□□□□ 0.12
LIME1-205ENST00000480139 IL18Q14116 193 aa15.81■□□□□ 0.12
LIME1-205ENST00000480139 OVCH2Q7RTZ1 564 aa15.81■□□□□ 0.12
LIME1-205ENST00000480139 LYSMD2Q8IV50 215 aa15.81■□□□□ 0.12
LIME1-205ENST00000480139 OR52I2Q8NH67 350 aa15.81■□□□□ 0.12
LIME1-205ENST00000480139 CAPSLQ8WWF8 208 aa15.81■□□□□ 0.12
LIME1-205ENST00000480139 FCAMRQ8WWV6 532 aa15.81■□□□□ 0.12
LIME1-205ENST00000480139 AKR1E2Q96JD6 320 aa15.81■□□□□ 0.12
LIME1-205ENST00000480139 NABP2Q9BQ15 211 aa15.81■□□□□ 0.12
LIME1-205ENST00000480139 MRPL20Q9BYC9 149 aaKnown RBP15.81■□□□□ 0.12
LIME1-205ENST00000480139 OR2D2Q9H210 308 aa15.81■□□□□ 0.12
LIME1-205ENST00000480139 C1RLQ9NZP8 487 aa15.81■□□□□ 0.12
LIME1-205ENST00000480139 MTFP1Q9UDX5 166 aa15.81■□□□□ 0.12
LIME1-205ENST00000480139 SLC22A5O76082 557 aa15.8■□□□□ 0.12
LIME1-205ENST00000480139 OR2F2O95006 317 aa15.8■□□□□ 0.12
LIME1-205ENST00000480139 FCER2P06734 321 aa15.8■□□□□ 0.12
LIME1-205ENST00000480139 NFYAP23511 347 aaPredicted RBP15.8■□□□□ 0.12
LIME1-205ENST00000480139 LUMP51884 338 aaPredicted RBP15.8■□□□□ 0.12
LIME1-205ENST00000480139 DYRK1AQ13627 763 aa15.8■□□□□ 0.12
LIME1-205ENST00000480139 RPL39P5Q59GN2 51 aa15.8■□□□□ 0.12
LIME1-205ENST00000480139 TMEM219Q86XT9 240 aa15.8■□□□□ 0.12
LIME1-205ENST00000480139 OR5H2Q8NGV7 314 aa15.8■□□□□ 0.12
LIME1-205ENST00000480139 SMIM4Q8WVI0 70 aa15.8■□□□□ 0.12
LIME1-205ENST00000480139 GIMAP1Q8WWP7 306 aa15.8■□□□□ 0.12
LIME1-205ENST00000480139 RBM14Q96PK6 669 aaKnown RBP15.8■□□□□ 0.12
LIME1-205ENST00000480139 RANBP3Q9H6Z4 567 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms