RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 MRPL30Q8TCC3 161 aaKnown RBP9.31□□□□□ -0.92
CHD6-208ENST00000480022 STARD4Q96DR4 205 aa9.31□□□□□ -0.92
CHD6-208ENST00000480022 SAMD10Q9BYL1 202 aa9.31□□□□□ -0.92
CHD6-208ENST00000480022 CLEC5AQ9NY25 188 aa9.31□□□□□ -0.92
CHD6-208ENST00000480022 DIRC3C9JPN6 131 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 SLC33A1O00400 549 aaPredicted RBP9.3□□□□□ -0.92
CHD6-208ENST00000480022 PLPP3O14495 311 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 ADAM20O43506 726 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 CHST1O43916 411 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 SERF1AO75920 110 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 VENTXO95231 258 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 NPBWR2P48146 333 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 PSMB3P49720 205 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 RPS20P60866 119 aaKnown RBP9.3□□□□□ -0.92
CHD6-208ENST00000480022 ID3Q02535 119 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 DMRTC1Q5HYR2 192 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 LHX4Q969G2 390 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 ABHD17AQ96GS6 310 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 PSMG3Q9BT73 122 aaPredicted RBP9.3□□□□□ -0.92
CHD6-208ENST00000480022 TMEM222Q9H0R3 208 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 ZNF703Q9H7S9 590 aaPredicted RBP9.3□□□□□ -0.92
CHD6-208ENST00000480022 ZNF160Q9HCG1 818 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 PHF3Q92576 2039 aaKnown RBP9.3□□□□□ -0.92
CHD6-208ENST00000480022 TRAV34A0A0B4J273 112 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 PRTGQ2VWP7 1150 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 UEVLDQ8IX04 471 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 OR8B12Q8NGG6 310 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 ZDHHC11Q9H8X9 412 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 RARRES3Q9UL19 164 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 UBE2J1Q9Y385 318 aaPredicted RBP9.3□□□□□ -0.92
CHD6-208ENST00000480022 PTRH2Q9Y3E5 179 aaKnown RBP9.3□□□□□ -0.92
CHD6-208ENST00000480022 PCNX2A6NKB5 2137 aa9.3□□□□□ -0.92
CHD6-208ENST00000480022 IGKV1D-43A0A0B4J1Z2 117 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 MPPED1O15442 326 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 PRKNO60260 465 aaPredicted RBP9.29□□□□□ -0.92
CHD6-208ENST00000480022 TIAF1O95411 115 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 ZNF17P17021 662 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 EFNA3P52797 238 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 KRTDAPP60985 99 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 SERF2P84101 59 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 EIF3IQ13347 325 aaKnown RBP9.29□□□□□ -0.92
CHD6-208ENST00000480022 IL11RAQ14626 422 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 VAMP3Q15836 100 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 LHFPL4Q7Z7J7 247 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 C11orf40Q8WZ69 217 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 DYRK2Q92630 601 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 GPR146Q96CH1 333 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 SMIM12Q96EX1 92 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 SIGLEC12Q96PQ1 595 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 OR10A5Q9H207 317 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 ZNF586Q9NXT0 402 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 FBXL7Q9UJT9 491 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 CEP250Q9BV73 2442 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 RNF212BA8MTL3 300 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 NPIPA2E9PIF3 369 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 HS3ST1O14792 307 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 HLA-DOBP13765 273 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 CRISP2P16562 243 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 DTYMKP23919 212 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 YPEL3P61236 119 aaPredicted RBP9.29□□□□□ -0.92
CHD6-208ENST00000480022 HERV-K104P61576 105 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 SLAQ13239 276 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 MRPL49Q13405 166 aaKnown RBP9.29□□□□□ -0.92
CHD6-208ENST00000480022 TESK1Q15569 626 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 FFAR4Q5NUL3 377 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 Q5PR19 223 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 PRAMEF20Q5VT98 475 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 KLHDC1Q8N7A1 406 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 Q8N976 141 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 TMEM56Q96MV1 263 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 SLC46A1Q96NT5 459 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 SLC39A9Q9NUM3 307 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 MRPS16Q9Y3D3 137 aaKnown RBP9.29□□□□□ -0.92
CHD6-208ENST00000480022 TMEM56-RWDD3S4R434 201 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 UNC13CQ8NB66 2214 aa9.29□□□□□ -0.92
CHD6-208ENST00000480022 FAM166BA8MTA8 275 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 NXPH3O95157 252 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 UTS2O95399 124 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 PAX9P55771 341 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 TLE1Q04724 770 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 FOXL1Q12952 345 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 DOK3Q7L591 496 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 TCF23Q7RTU1 214 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 SIGLECL1Q8N7X8 197 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 OR4F5Q8NH21 305 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 PSMF1Q92530 271 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 PINX1Q96BK5 328 aaKnown RBP9.28□□□□□ -0.92
CHD6-208ENST00000480022 OR4F4Q96R69 305 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 TGFBR3LH3BV60 316 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 NUDT14O95848 222 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 CTXN2P0C2S0 81 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 CD99P14209 185 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 PMP22Q01453 160 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 CNN3Q15417 329 aaKnown RBP9.28□□□□□ -0.92
CHD6-208ENST00000480022 CRIP3Q6Q6R5 217 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 BAGE3Q86Y29 109 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 BAGE2Q86Y30 109 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 SELENOHQ8IZQ5 122 aaKnown RBP9.28□□□□□ -0.92
CHD6-208ENST00000480022 DGAT2Q96PD7 388 aa9.28□□□□□ -0.92
CHD6-208ENST00000480022 RBM24Q9BX46 236 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms