RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 MRAPQ8TCY5 172 aa11.38□□□□□ -0.59
ATG4B-218ENST00000479554 ARL11Q969Q4 196 aa11.38□□□□□ -0.59
ATG4B-218ENST00000479554 THAP7Q9BT49 309 aaPredicted RBP11.38□□□□□ -0.59
ATG4B-218ENST00000479554 AURKAIP1Q9NWT8 199 aaPredicted RBP11.38□□□□□ -0.59
ATG4B-218ENST00000479554 GHRLQ9UBU3 117 aa11.38□□□□□ -0.59
ATG4B-218ENST00000479554 RAB22AQ9UL26 194 aa11.38□□□□□ -0.59
ATG4B-218ENST00000479554 PSMB11A5LHX3 300 aa11.37□□□□□ -0.59
ATG4B-218ENST00000479554 IGKV1D-33P01593 117 aa11.37□□□□□ -0.59
ATG4B-218ENST00000479554 IGKV1-33P01594 117 aa11.37□□□□□ -0.59
ATG4B-218ENST00000479554 TAS2R20P59543 309 aa11.37□□□□□ -0.59
ATG4B-218ENST00000479554 ZNF816Q0VGE8 651 aaPredicted RBP11.37□□□□□ -0.59
ATG4B-218ENST00000479554 PLA2G7Q13093 441 aa11.37□□□□□ -0.59
ATG4B-218ENST00000479554 GPR176Q14439 515 aa11.37□□□□□ -0.59
ATG4B-218ENST00000479554 HNF4GQ14541 408 aa11.37□□□□□ -0.59
ATG4B-218ENST00000479554 AWAT2Q6E213 333 aa11.37□□□□□ -0.59
ATG4B-218ENST00000479554 IZUMO1Q8IYV9 350 aa11.37□□□□□ -0.59
ATG4B-218ENST00000479554 C5orf56Q8N8D9 126 aa11.37□□□□□ -0.59
ATG4B-218ENST00000479554 WFDC9Q8NEX5 89 aa11.37□□□□□ -0.59
ATG4B-218ENST00000479554 OR52M1Q8NGK5 317 aa11.37□□□□□ -0.59
ATG4B-218ENST00000479554 CCDC107Q8WV48 283 aa11.37□□□□□ -0.59
ATG4B-218ENST00000479554 SMIM4Q8WVI0 70 aa11.37□□□□□ -0.59
ATG4B-218ENST00000479554 ATG5Q9H1Y0 275 aa11.37□□□□□ -0.59
ATG4B-218ENST00000479554 SPACA1Q9HBV2 294 aa11.37□□□□□ -0.59
ATG4B-218ENST00000479554 MRPS28Q9Y2Q9 187 aaKnown RBP11.37□□□□□ -0.59
ATG4B-218ENST00000479554 NOTCH3Q9UM47 2321 aa11.37□□□□□ -0.59
ATG4B-218ENST00000479554 METTL21EPA6NDL7 271 aa11.36□□□□□ -0.59
ATG4B-218ENST00000479554 C15orf65H3BRN8 121 aa11.36□□□□□ -0.59
ATG4B-218ENST00000479554 GABARAPH6UMI1 98 aa11.36□□□□□ -0.59
ATG4B-218ENST00000479554 SDCBPO00560 298 aaPredicted RBP11.36□□□□□ -0.59
ATG4B-218ENST00000479554 FGF16O43320 207 aa11.36□□□□□ -0.59
ATG4B-218ENST00000479554 SCGNO76038 276 aa11.36□□□□□ -0.59
ATG4B-218ENST00000479554 GAPDHP04406 335 aaKnown RBP11.36□□□□□ -0.59
ATG4B-218ENST00000479554 REG1BP48304 166 aa11.36□□□□□ -0.59
ATG4B-218ENST00000479554 QRFPP83859 136 aa11.36□□□□□ -0.59
ATG4B-218ENST00000479554 ZNF57Q68EA5 555 aaPredicted RBP11.36□□□□□ -0.59
ATG4B-218ENST00000479554 RAB12Q6IQ22 244 aa11.36□□□□□ -0.59
ATG4B-218ENST00000479554 MZT2BQ6NZ67 158 aa11.36□□□□□ -0.59
ATG4B-218ENST00000479554 GLIPR1L1Q6UWM5 242 aa11.36□□□□□ -0.59
ATG4B-218ENST00000479554 ZNF497Q6ZNH5 498 aa11.36□□□□□ -0.59
ATG4B-218ENST00000479554 MOB3BQ86TA1 216 aa11.36□□□□□ -0.59
ATG4B-218ENST00000479554 UBALD1Q8TB05 177 aa11.36□□□□□ -0.59
ATG4B-218ENST00000479554 TRIM63Q969Q1 353 aa11.36□□□□□ -0.59
ATG4B-218ENST00000479554 KCNK15Q9H427 330 aa11.36□□□□□ -0.59
ATG4B-218ENST00000479554 IGHV3-43A0A0B4J1X8 118 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 IGHV1-3A0A0C4DH29 117 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 LINC00854A0A1B0GVQ3 168 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 SERPINE3A8MV23 424 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 TMEM14DPA8MWL7 114 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 MCRIP1C9JLW8 97 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 PLA2G10O15496 165 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 ORC5O43913 435 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 MT-ND4P03905 459 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 IGHV3-43DP0DP04 118 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 IL3RAP26951 378 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 LOXL3P58215 753 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 DGCR2P98153 550 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 ZNF329Q86UD4 541 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 LINC00311Q8N616 119 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 KCNG3Q8TAE7 436 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 FCAMRQ8WWV6 532 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 FAM46BQ96A09 425 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 MRPS24Q96EL2 167 aaKnown RBP11.35□□□□□ -0.59
ATG4B-218ENST00000479554 RCC1LQ96I51 464 aaKnown RBP11.35□□□□□ -0.59
ATG4B-218ENST00000479554 C11orf54Q9H0W9 315 aaPredicted RBP11.35□□□□□ -0.59
ATG4B-218ENST00000479554 RAB9BQ9NP90 201 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 GFOD1Q9NXC2 390 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 ETAA1Q9NY74 926 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 RCC2Q9P258 522 aaKnown RBP11.35□□□□□ -0.59
ATG4B-218ENST00000479554 TRAPPC2LQ9UL33 140 aa11.35□□□□□ -0.59
ATG4B-218ENST00000479554 hCG_2014768A0A024R1R8 64 aa11.34□□□□□ -0.59
ATG4B-218ENST00000479554 TRAV18A0A075B6X5 111 aa11.34□□□□□ -0.59
ATG4B-218ENST00000479554 IGHV3-72A0A0B4J1Y9 119 aa11.34□□□□□ -0.59
ATG4B-218ENST00000479554 SPINT2O43291 252 aa11.34□□□□□ -0.59
ATG4B-218ENST00000479554 VSIG8P0DPA2 414 aa11.34□□□□□ -0.59
ATG4B-218ENST00000479554 UNC119Q13432 240 aa11.34□□□□□ -0.59
ATG4B-218ENST00000479554 C6orf183Q5T699 404 aa11.34□□□□□ -0.59
ATG4B-218ENST00000479554 OR10K2Q6IF99 312 aa11.34□□□□□ -0.59
ATG4B-218ENST00000479554 SLC35E3Q7Z769 313 aa11.34□□□□□ -0.59
ATG4B-218ENST00000479554 FOXRED2Q8IWF2 684 aa11.34□□□□□ -0.59
ATG4B-218ENST00000479554 C8orf31Q8N9H6 132 aa11.34□□□□□ -0.59
ATG4B-218ENST00000479554 NOL4LQ96MY1 436 aaPredicted RBP11.34□□□□□ -0.59
ATG4B-218ENST00000479554 C7orf50Q9BRJ6 194 aaKnown RBP11.34□□□□□ -0.59
ATG4B-218ENST00000479554 CST11Q9H112 138 aa11.34□□□□□ -0.59
ATG4B-218ENST00000479554 CENPXA8MT69 81 aa11.33□□□□□ -0.6
ATG4B-218ENST00000479554 C12orf77C9JDV5 145 aa11.33□□□□□ -0.6
ATG4B-218ENST00000479554 LYRM1O43325 122 aa11.33□□□□□ -0.6
ATG4B-218ENST00000479554 LANCL1O43813 399 aa11.33□□□□□ -0.6
ATG4B-218ENST00000479554 CRTAPO75718 401 aaPredicted RBP11.33□□□□□ -0.6
ATG4B-218ENST00000479554 DUS4LO95620 317 aaKnown RBP11.33□□□□□ -0.6
ATG4B-218ENST00000479554 IGHG2P01859 326 aa11.33□□□□□ -0.6
ATG4B-218ENST00000479554 CD3GP09693 182 aa11.33□□□□□ -0.6
ATG4B-218ENST00000479554 GSTT2BP0CG30 244 aa11.33□□□□□ -0.6
ATG4B-218ENST00000479554 SPNP16150 400 aa11.33□□□□□ -0.6
ATG4B-218ENST00000479554 RFX2P48378 723 aa11.33□□□□□ -0.6
ATG4B-218ENST00000479554 AP3S2P59780 193 aa11.33□□□□□ -0.6
ATG4B-218ENST00000479554 RPL23AP62750 156 aaKnown RBP11.33□□□□□ -0.6
ATG4B-218ENST00000479554 SLC35B1P78383 322 aa11.33□□□□□ -0.6
ATG4B-218ENST00000479554 EBI3Q14213 229 aa11.33□□□□□ -0.6
ATG4B-218ENST00000479554 TMEM30BQ3MIR4 351 aa11.33□□□□□ -0.6
ATG4B-218ENST00000479554 Q3ZCU0 254 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms