RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 OR51G1Q8NGK1 321 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 LOC102723971A0A1B0GUV8 181 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 SRFP11831 508 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 ZNF506Q5JVG8 444 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 FLVCR1-AS1Q8TAF5 88 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 VSIRQ9H7M9 311 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 FOXJ2Q9P0K8 574 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 TAAR3PQ9P1P4 343 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 RPL36A-HNRNPH2H7BZ11 118 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 K7N7A8 449 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 IGHV2-70P01814 119 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 FGF5P12034 268 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 FOLR2P14207 255 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 SPCS3P61009 180 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 TRAT1Q6PIZ9 186 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 TCF23Q7RTU1 214 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 CALHM1Q8IU99 346 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 MANBALQ9NQG1 85 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 OR1A1Q9P1Q5 309 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 A0A1B0GTQ1 180 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 LDLRAD4O15165 306 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 SUCLG1P53597 346 aaKnown RBP11.63□□□□□ -0.55
USP42-206ENST00000479544 RAC1P63000 192 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 DMWDQ09019 674 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 COL5A1-AS1Q5SY13 56 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 CLDND2Q8NHS1 167 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 ANAPC16Q96DE5 110 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 NDUFAF3Q9BU61 184 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 BET1LQ9NYM9 111 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 SIT1Q9Y3P8 196 aa11.63□□□□□ -0.55
USP42-206ENST00000479544 A0A0U1RQV5 110 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 CD81P60033 236 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 WBP1Q96G27 269 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 SELENOKQ9Y6D0 94 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 USF3Q68DE3 2245 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 A0A1B0GU03 582 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 SLC22A20A6NK97 555 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 RRP8O43159 456 aaKnown RBP11.62□□□□□ -0.55
USP42-206ENST00000479544 PMELP40967 661 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 FXYD3Q14802 87 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 EXT1Q16394 746 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 TBC1D28Q2M2D7 210 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 S1PR3Q99500 378 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 OR2H1Q9GZK4 316 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 AKIRIN1Q9H9L7 192 aaPredicted RBP11.62□□□□□ -0.55
USP42-206ENST00000479544 GLRX2Q9NS18 164 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 HELZP42694 1942 aaKnown RBP11.62□□□□□ -0.55
USP42-206ENST00000479544 AMBPP02760 352 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 PLGLAQ15195 96 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 RHBDD2Q6NTF9 364 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 OR8I2Q8N0Y5 310 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 D2HGDHQ8N465 521 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 TCTEX1D1Q8N7M0 179 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 ABHD14BQ96IU4 210 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 HSD17B10Q99714 261 aaKnown RBP11.62□□□□□ -0.55
USP42-206ENST00000479544 WDR61Q9GZS3 305 aaKnown RBP11.62□□□□□ -0.55
USP42-206ENST00000479544 WNT10AQ9GZT5 417 aa11.62□□□□□ -0.55
USP42-206ENST00000479544 HPRT1P00492 218 aa11.61□□□□□ -0.55
USP42-206ENST00000479544 CD82P27701 267 aa11.61□□□□□ -0.55
USP42-206ENST00000479544 PSG5Q15238 335 aa11.61□□□□□ -0.55
USP42-206ENST00000479544 IGKV1D-13A0A0B4J2D9 117 aa11.61□□□□□ -0.55
USP42-206ENST00000479544 SLC17A3O00476 420 aa11.61□□□□□ -0.55
USP42-206ENST00000479544 IGKV1-13P0DP09 117 aa11.61□□□□□ -0.55
USP42-206ENST00000479544 SERF2P84101 59 aa11.61□□□□□ -0.55
USP42-206ENST00000479544 FGFRL1Q8N441 504 aa11.61□□□□□ -0.55
USP42-206ENST00000479544 GATAD1Q8WUU5 269 aa11.61□□□□□ -0.55
USP42-206ENST00000479544 VWCEQ96DN2 955 aa11.61□□□□□ -0.55
USP42-206ENST00000479544 NLRC5Q86WI3 1866 aa11.61□□□□□ -0.55
USP42-206ENST00000479544 DBX1A6NMT0 343 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 RAB29O14966 203 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 CEACAM1P13688 526 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 CEBPDP49716 269 aaPredicted RBP11.6□□□□□ -0.55
USP42-206ENST00000479544 RAC3P60763 192 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 AESQ08117 197 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 SPINK14Q6IE38 97 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 TMEM38BQ9NVV0 291 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 OCIAD1Q9NX40 245 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 C1QTNF9BB2RNN3 333 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 M0QZK8 103 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 CHEK1O14757 476 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 GGCTO75223 188 aaKnown RBP11.6□□□□□ -0.55
USP42-206ENST00000479544 CD55P08174 381 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 SELEP16581 610 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 TNFSF10P50591 281 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 STARD6P59095 220 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 HIST3H3Q16695 136 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 TUSC5Q8IXB3 177 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 EDARADDQ8WWZ3 215 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 ANGPTL4Q9BY76 406 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 ZNF835Q9Y2P0 537 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 LOC390937A0A1W2PQ73 354 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 CCL4P13236 92 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 FCER1GP30273 86 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 IGLV3-21P80748 117 aaPredicted RBP11.6□□□□□ -0.55
USP42-206ENST00000479544 HGFACQ04756 655 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 NHLRC2Q8NBF2 726 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 TMEM171Q8WVE6 324 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 SDF2L1Q9HCN8 221 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 M0R2Z0 102 aa11.6□□□□□ -0.55
USP42-206ENST00000479544 OR4A8P0C604 315 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms