RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 GIMAP1Q8WWP7 306 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 IL1F10Q8WWZ1 152 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 ARL11Q969Q4 196 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 MOB3AQ96BX8 217 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 GALMQ96C23 342 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 GPHA2Q96T91 129 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 SLC25A21Q9BQT8 299 aaPredicted RBP5.46□□□□□ -1.54
USP48-208ENST00000479177 GINS4Q9BRT9 223 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 ZNF2Q9BSG1 426 aaPredicted RBP5.46□□□□□ -1.54
USP48-208ENST00000479177 MARVELD1Q9BSK0 173 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 TOLLIPQ9H0E2 274 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 PARP12Q9H0J9 701 aaKnown RBP5.46□□□□□ -1.54
USP48-208ENST00000479177 GAL3ST2Q9H3Q3 398 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 TAS2R3Q9NYW6 316 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 ZNF69Q9UC07 566 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 FLVCR2Q9UPI3 526 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 VSIG4Q9Y279 399 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 UBE2J1Q9Y385 318 aaPredicted RBP5.46□□□□□ -1.54
USP48-208ENST00000479177 TRAV6A0A075B6T7 132 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 A0A096LNT2 108 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 IGHV3-43A0A0B4J1X8 118 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 A0A0B4J293 547 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 IGKV1D-13A0A0B4J2D9 117 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 IGHV4-61A0A0C4DH41 118 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 A0A1B0GVG6 124 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 PHF1O43189 567 aaPredicted RBP5.45□□□□□ -1.54
USP48-208ENST00000479177 PEX14O75381 377 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 PPYP01298 95 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 HEXAP06865 529 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 ZNF728P0DKX0 622 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 IGHV3-43DP0DP04 118 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 IGKV1-13P0DP09 117 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 SLC25A16P16260 332 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 CCL3L1P16619 93 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 PPP1CCP36873 323 aaKnown RBP5.45□□□□□ -1.54
USP48-208ENST00000479177 RAG2P55895 527 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 LOXL3P58215 753 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 FXYD4P59646 89 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 HERV-K104P61576 105 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 GNB2P62879 340 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 FOXL1Q12952 345 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 SURF2Q15527 256 aaPredicted RBP5.45□□□□□ -1.54
USP48-208ENST00000479177 CLEC12BQ2HXU8 276 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 ESCO2Q56NI9 601 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 PRAMEF5Q5TYX0 476 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 FAM53AQ6NSI3 398 aaPredicted RBP5.45□□□□□ -1.54
USP48-208ENST00000479177 HEPN1Q6WQI6 88 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 LDLRAD3Q86YD5 345 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 ZNF565Q8N9K5 539 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 CLRN3Q8NCR9 226 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 LY6G5BQ8NDX9 201 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 OR52L2PQ8NGH6 319 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 OR10V1Q8NGI7 309 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 OR6F1Q8NGZ6 308 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 OR10J5Q8NHC4 309 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 RFESDQ8TAC1 157 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 MARCH1Q8TCQ1 289 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 RAB39BQ96DA2 213 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 ZNF714Q96N38 554 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 RAB9BQ9NP90 201 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 RDH8Q9NYR8 311 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 IDI2-AS1Q9NZ38 188 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 SLC23A1Q9UHI7 598 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 RPUSD1Q9UJJ7 312 aaKnown RBP5.45□□□□□ -1.54
USP48-208ENST00000479177 JPT1Q9UK76 154 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 TEX15Q9BXT5 2789 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 ABCA1O95477 2261 aa5.45□□□□□ -1.54
USP48-208ENST00000479177 CSMD2Q7Z408 3487 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 LOC105371242A0A075B767 164 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 FAM172BPA6NC97 362 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 C17orf98A8MV24 154 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 INMT-MINDY4F8WBC2 141 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 HSPA12AO43301 675 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 MMP23AO75900 390 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 TOX4O94842 621 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 RBP4P02753 201 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 RLN1P04808 185 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 CTSDP07339 412 aaPredicted RBP5.44□□□□□ -1.54
USP48-208ENST00000479177 VSIG10L2P0DP72 767 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 PGAM2P15259 253 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 CR1P17927 2039 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 ANXA7P20073 488 aaKnown RBP5.44□□□□□ -1.54
USP48-208ENST00000479177 OMGP23515 440 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 ZBTB25P24278 435 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 ZFP36P26651 326 aaKnown RBP5.44□□□□□ -1.54
USP48-208ENST00000479177 UCP3P55916 312 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 RAB25P57735 213 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 PAX2Q02962 417 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 BAMBIQ13145 260 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 LTC4SQ16873 150 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 TATDN3Q17R31 274 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 Q5PR19 223 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 UTF1Q5T230 341 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 TMED4Q7Z7H5 227 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 KIR3DL3Q8N743 410 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 OR10A7Q8NGE5 316 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 OR52M1Q8NGK5 317 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 FAM216AQ8WUB2 273 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 CHAC2Q8WUX2 184 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 TOMM40LQ969M1 308 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms