RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 TRAPPC4Q9Y296 219 aa3.09□□□□□ -1.91
CCDC171-207ENST00000478913 IGHV3-64DA0A0J9YX35 117 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 BTBD17A6NE02 478 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 ZNF860A6NHJ4 632 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 METTL15A6NJ78 407 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 C12orf71A8MTZ7 269 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 BET1O15155 118 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 NBR2O15453 112 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 RDH16O75452 317 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 DHFRP00374 187 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 SERPINA1P01009 418 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 OPN1SWP03999 348 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 ANXA8P13928 327 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 OGNP20774 298 aaKnown RBP3.08□□□□□ -1.92
CCDC171-207ENST00000478913 MYL9P24844 172 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 S100A3P33764 101 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 RCVRNP35243 200 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 TALDO1P37837 337 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 ETV6P41212 452 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 CCR6P51684 374 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 SPIBQ01892 262 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 PSG5Q15238 335 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 CCDC58Q4VC31 144 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 HSD17B12Q53GQ0 312 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 SMUG1Q53HV7 270 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 PYDC2Q56P42 97 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 TRIM40Q6P9F5 258 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 FAM131AQ6UXB0 335 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 AHSA2Q719I0 299 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 ZNF546Q86UE3 836 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 CYP4Z1Q86W10 505 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 CDH26Q8IXH8 852 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 RIMKLAQ8IXN7 391 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 TCTE3Q8IZS6 198 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 CCDC54Q8NEL0 328 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 NPBQ8NG41 125 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 OR9I1Q8NGQ6 314 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 ZFAND1Q8TCF1 268 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 ZNF675Q8TD23 568 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 DEDD2Q8WXF8 326 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 CREB3L1Q96BA8 519 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 TRNT1Q96Q11 434 aaKnown RBP3.08□□□□□ -1.92
CCDC171-207ENST00000478913 OR52E6Q96RD3 313 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 ZNF382Q96SR6 550 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 ZNF649Q9BS31 505 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 PRRG3Q9BZD7 231 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 DERL2Q9GZP9 239 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 DUSP21Q9H596 190 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 ANKRA2Q9H9E1 313 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 EXOSC4Q9NPD3 245 aaKnown RBP3.08□□□□□ -1.92
CCDC171-207ENST00000478913 IL26Q9NPH9 171 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 ACOT13Q9NPJ3 140 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 POLE4Q9NR33 117 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 CA10Q9NS85 328 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 RBM22Q9NW64 420 aaKnown RBP eCLIP3.08□□□□□ -1.92
CCDC171-207ENST00000478913 C1orf109Q9NX04 203 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 VPREB3Q9UKI3 123 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 POFUT2Q9Y2G5 429 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 SAMHD1Q9Y3Z3 626 aaKnown RBP3.08□□□□□ -1.92
CCDC171-207ENST00000478913 ASB4Q9Y574 426 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 DNAJC15Q9Y5T4 150 aa3.08□□□□□ -1.92
CCDC171-207ENST00000478913 CHCHD2Q9Y6H1 151 aaPredicted RBP3.08□□□□□ -1.92
CCDC171-207ENST00000478913 USH2AO75445 5202 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 FAM240BA0A1B0GVZ2 78 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 FABP12A6NFH5 140 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 MYL12BO14950 172 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 SULT1B1O43704 296 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 IGF2P01344 180 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 IGHMP01871 453 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 C1QBP02746 253 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 CDK1P06493 297 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 PSKH1P11801 424 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 PRPS2P11908 318 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 HPGDP15428 266 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 MYL12AP19105 171 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 CPN2P22792 545 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 CFL1P23528 166 aaKnown RBP3.07□□□□□ -1.92
CCDC171-207ENST00000478913 GTF2E2P29084 291 aaKnown RBP3.07□□□□□ -1.92
CCDC171-207ENST00000478913 POLR2IP36954 125 aaKnown RBP3.07□□□□□ -1.92
CCDC171-207ENST00000478913 MAP2K4P45985 399 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 CCT3P49368 545 aaKnown RBP3.07□□□□□ -1.92
CCDC171-207ENST00000478913 TTPAP49638 278 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 RGS6P49758 472 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 GBX2P52951 348 aaPredicted RBP3.07□□□□□ -1.92
CCDC171-207ENST00000478913 NKX2-5P52952 324 aaPredicted RBP3.07□□□□□ -1.92
CCDC171-207ENST00000478913 SUCLG1P53597 346 aaKnown RBP3.07□□□□□ -1.92
CCDC171-207ENST00000478913 SMIM11AP58511 58 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 MAXP61244 160 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 HERVK_113P61574 105 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 NCS1P62166 190 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 PPP3R1P63098 170 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 SLAMF1Q13291 335 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 AQP6Q13520 282 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 OR5I1Q13606 314 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 FAM53BQ14153 422 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 KIAA0087Q14695 138 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 MAD2L1BPQ15013 274 aaPredicted RBP3.07□□□□□ -1.92
CCDC171-207ENST00000478913 TTLL9Q3SXZ7 439 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 SOHLH1Q5JUK2 328 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 TIMM23BQ5SRD1 257 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms