RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 MAPK14Q16539 360 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 C12orf74Q32Q52 190 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 TRMT12Q53H54 448 aaKnown RBP-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 DGAT2L6Q6ZPD8 337 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 CMTM8Q8IZV2 173 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 SLC22A24Q8N4F4 322 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 CNEP1R1Q8N9A8 125 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 TFGQ92734 400 aaPredicted RBP-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 NXF2Q9GZY0 626 aaKnown RBP-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 RAB20Q9NX57 234 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 AHSPQ9NZD4 102 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 COX16Q9P0S2 106 aa-0.72□□□□□ -2.52
NCKAP1-204ENST00000477988 COL6A3P12111 3177 aa-0.72□□□□□ -2.53
NCKAP1-204ENST00000477988 HERC2O95714 4834 aa-0.72□□□□□ -2.53
NCKAP1-204ENST00000477988 DOPEY1Q5JWR5 2465 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 SIPA1L1O43166 1804 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 CHD9Q3L8U1 2897 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 KDM6BO15054 1643 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 TRAV8-7A0A075B6U6 113 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 A0A0D9SEW6 157 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 A0A1W2PQD3 144 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 FAM183AA6NL82 134 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 IBA57-AS1B1ANH7 110 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 OR11H12B2RN74 326 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 NCR3O14931 201 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 SLC2A1P11166 492 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 SPNP16150 400 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 CRYBB3P26998 211 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 SPANXN2Q5MJ10 180 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 DUPD1Q68J44 220 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 DRAM2Q6UX65 266 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 DRAXINQ8NBI3 349 aaPredicted RBP-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 PROKR2Q8NFJ6 384 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 OR1L8Q8NGR8 309 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 OR11H2Q8NH07 326 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 SMCR5Q8TEV8 140 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 AQP3Q92482 292 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 BPIFA3Q9BQP9 254 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 UTP23Q9BRU9 249 aaKnown RBP-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 EBPLQ9BY08 206 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 GOLPH3Q9H4A6 298 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 METTL17Q9H7H0 456 aaPredicted RBP-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 ANKHQ9HCJ1 492 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 RHBDD3Q9Y3P4 386 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 LHFPL6Q9Y693 200 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 ABCB11O95342 1321 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 SYNRGQ9UMZ2 1314 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 MUC4Q99102 2169 aa-0.73□□□□□ -2.53
NCKAP1-204ENST00000477988 GREB1Q4ZG55 1949 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 IGHV1-18A0A0C4DH31 117 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 A0A1W2PRF3 423 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 A0A1W2PRM7 423 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 ANKRD20A5PA0PJZ0 165 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 M0R2N4 97 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 ENSAO43768 121 aaKnown RBP-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 ZMPSTE24O75844 475 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 CD8AP01732 235 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 IGHV1-69P01742 117 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 DEFA4P12838 97 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 CCL5P13501 91 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 OPRM1P35372 400 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 IFNGR2P38484 337 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 TAS2R20P59543 309 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 DYNC1I2Q13409 638 aaKnown RBP-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 NDUFAF6Q330K2 333 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 TMEM31Q5JXX7 168 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 GDF5OSQ5U4N7 250 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 LYZL1Q6UWQ5 148 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 OR2W3Q7Z3T1 314 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 CA13Q8N1Q1 262 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 C17orf78Q8N4C9 275 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 TEX9Q8N6V9 391 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 ZNF418Q8TF45 676 aaPredicted RBP-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 PATE1Q8WXA2 126 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 GALMQ96C23 342 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 CMTM5Q96DZ9 223 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 DIABLOQ9NR28 239 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 HHLA2Q9UM44 414 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 FIS1Q9Y3D6 152 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 CREBBPQ92793 2442 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 ANAPC1Q9H1A4 1944 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 EML6Q6ZMW3 1958 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 MED12Q93074 2177 aa-0.74□□□□□ -2.53
NCKAP1-204ENST00000477988 THSD7AQ9UPZ6 1657 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 CITO14578 2027 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 FAT1Q14517 4588 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 LINC00862A6NCI5 91 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 OR51F1A6NGY5 319 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 C8orf87E5RJ46 101 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 TRAPPC2LH3BP13 241 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 GATCO43716 136 aaKnown RBP-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 NPYP01303 97 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 ATP6V0CP27449 155 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 ACTR1BP42025 376 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 CRATP43155 626 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 GCLMP48507 274 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 ETV1P50549 477 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 HBG1P69891 147 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 HBG2P69892 147 aa-0.75□□□□□ -2.53
NCKAP1-204ENST00000477988 FAM3AP98173 230 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms