RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 AKR7A2O43488 359 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 TPST2O60704 377 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 DUSP14O95147 198 aaKnown RBP3.11□□□□□ -1.91
VPS50-214ENST00000477935 LYPD3O95274 346 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 SERPINA1P01009 418 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 ZNF92Q03936 586 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 MEF2CQ06413 473 aaPredicted RBP3.11□□□□□ -1.91
VPS50-214ENST00000477935 PPP1R8Q12972 351 aaKnown RBP3.11□□□□□ -1.91
VPS50-214ENST00000477935 LIPKQ5VXJ0 399 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 LCN12Q6JVE5 192 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 LYG2Q86SG7 212 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 WDR86Q86TI4 376 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 TGIF2LXQ8IUE1 241 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 Q8N402 240 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 ZNF676Q8N7Q3 588 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 OR52L1Q8NGH7 329 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 OR4P4Q8NGL7 312 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 SPTSSAQ969W0 71 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 VSIG2Q96IQ7 327 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 ZNF714Q96N38 554 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 MCHR1Q99705 422 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 RTL8AQ9BWD3 113 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 ABCG5Q9H222 651 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 YY1AP1Q9H869 796 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 TPT1P8Q9HAU6 139 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 CENPMQ9NSP4 180 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 SLC2A8Q9NY64 477 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 ADA2Q9NZK5 511 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 ANGPT4Q9Y264 503 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 SIGLEC7Q9Y286 467 aa3.11□□□□□ -1.91
VPS50-214ENST00000477935 UTP11Q9Y3A2 253 aaKnown RBP3.11□□□□□ -1.91
VPS50-214ENST00000477935 hADV38S2A0JD32 116 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 PRSS37A4D1T9 235 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 TRAPPC13A5PLN9 417 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 M0R135 149 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 KPNA4O00629 521 aaPredicted RBP3.1□□□□□ -1.91
VPS50-214ENST00000477935 RFXANKO14593 260 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 CHEK1O14757 476 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 MPZL2O60487 215 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 OR7A10O76100 309 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 IGLV1-47P01700 117 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 HSPB1P04792 205 aaKnown RBP3.1□□□□□ -1.91
VPS50-214ENST00000477935 CFL1P23528 166 aaKnown RBP3.1□□□□□ -1.91
VPS50-214ENST00000477935 PRDX2P32119 198 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 RBM34P42696 430 aaKnown RBP3.1□□□□□ -1.91
VPS50-214ENST00000477935 RAB9AP51151 201 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 PRRX1P54821 245 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 GMFBP60983 142 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 CBX1P83916 185 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 ZNF85Q03923 595 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 RAB40BQ12829 278 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 FADDQ13158 208 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 HES1Q14469 280 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 AGBL2Q5U5Z8 902 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 REEP3Q6NUK4 255 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 DRAM2Q6UX65 266 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 Q6ZVH6 145 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 NAA40Q86UY6 237 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 ZNF645Q8N7E2 425 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 OR56B2PQ8NGI1 322 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 OR2K2Q8NGT1 345 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 ZNF799Q96GE5 643 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 LINC00167Q96N53 147 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 OR52E6Q96RD3 313 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 TOLLIPQ9H0E2 274 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 MEPEQ9NQ76 525 aaPredicted RBP3.1□□□□□ -1.91
VPS50-214ENST00000477935 PRO0461Q9UI25 63 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 APLNQ9ULZ1 77 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 PYCARDQ9ULZ3 195 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 POLR1DQ9Y2S0 133 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 STRAPQ9Y3F4 350 aaKnown RBP3.1□□□□□ -1.91
VPS50-214ENST00000477935 MPC1Q9Y5U8 109 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
VPS50-214ENST00000477935 RFPL4AA6NLU0 287 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 ZNF850A8MQ14 1090 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 OR11H12B2RN74 326 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 C11orf94C9JXX5 98 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 RFPL4AL1F8VTS6 287 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 LY6LH3BQJ8 138 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 BUB1B-PAK6H3BSN5 160 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 K7N7A8 449 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 LGALS9O00182 355 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 TOR1AO14656 332 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 XRCC2O43543 280 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 TYROBPO43914 113 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 TPST1O60507 370 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 OR5F1O95221 314 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 ANP32DO95626 131 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 IL6P05231 212 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 CDKN2CP42773 168 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 GPR4P46093 362 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 NPBWR2P48146 333 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 EWSR1Q01844 656 aaKnown RBP eCLIP3.09□□□□□ -1.91
VPS50-214ENST00000477935 ASAH1Q13510 395 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 RGNQ15493 299 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 TATDN3Q17R31 274 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 RFX4Q33E94 735 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 SMIM21Q3B7S5 101 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 SLC36A3Q495N2 470 aa3.09□□□□□ -1.91
VPS50-214ENST00000477935 C2orf83Q53S99 150 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms