RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 LY6G6FQ5SQ64 297 aa8.59□□□□□ -1.03
BRCA1-213ENST00000476777 DDI2Q5TDH0 399 aa8.59□□□□□ -1.03
BRCA1-213ENST00000476777 RAB12Q6IQ22 244 aa8.59□□□□□ -1.03
BRCA1-213ENST00000476777 DEFB125Q8N687 156 aa8.59□□□□□ -1.03
BRCA1-213ENST00000476777 POC5Q8NA72 575 aa8.59□□□□□ -1.03
BRCA1-213ENST00000476777 LGALS12Q96DT0 336 aa8.59□□□□□ -1.03
BRCA1-213ENST00000476777 MRPL48Q96GC5 212 aaKnown RBP8.59□□□□□ -1.03
BRCA1-213ENST00000476777 YPEL2Q96QA6 119 aa8.59□□□□□ -1.03
BRCA1-213ENST00000476777 CLCC1Q96S66 551 aa8.59□□□□□ -1.03
BRCA1-213ENST00000476777 NEURL2Q9BR09 285 aa8.59□□□□□ -1.03
BRCA1-213ENST00000476777 ZNF355PQ9NSJ1 428 aa8.59□□□□□ -1.03
BRCA1-213ENST00000476777 MBNL3Q9NUK0 354 aaKnown RBP8.59□□□□□ -1.03
BRCA1-213ENST00000476777 MUC4Q99102 2169 aa8.59□□□□□ -1.03
BRCA1-213ENST00000476777 A0A0G2JLM5 398 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 OR5H14A6NHG9 310 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 H0YJW9 148 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 H3BUA1 57 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 CA11O75493 328 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 SC5DO75845 299 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 CA2P00918 260 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 TRBV12-3P01733 135 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 CD7P09564 240 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 HTD2P86397 168 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 MRPL28Q13084 256 aaKnown RBP8.58□□□□□ -1.04
BRCA1-213ENST00000476777 FAM71F2Q6NXP2 309 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 ZNF554Q86TJ5 538 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 LAX1Q8IWV1 398 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 OR5T1Q8NG75 326 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 OR2AK2Q8NG84 335 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 OR2K2Q8NGT1 345 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 WFDC10AQ9H1F0 79 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 SRD5A3Q9H8P0 318 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 KCNIP1Q9NZI2 227 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 METTL1Q9UBP6 276 aaKnown RBP8.58□□□□□ -1.04
BRCA1-213ENST00000476777 SLC23A1Q9UHI7 598 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 PEX16Q9Y5Y5 336 aa8.58□□□□□ -1.04
BRCA1-213ENST00000476777 CXorf65A6NEN9 183 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 ZNF785A8K8V0 405 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 RBBP9O75884 186 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 OR2A4O95047 310 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 MAS1P04201 325 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 CD2P06729 351 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 GSTP1P09211 210 aaKnown RBP8.57□□□□□ -1.04
BRCA1-213ENST00000476777 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-213ENST00000476777 BDKRB2P30411 391 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 GTF2A1P52655 376 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-213ENST00000476777 GYS2P54840 703 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 SNRPGP62308 76 aaKnown RBP8.57□□□□□ -1.04
BRCA1-213ENST00000476777 PPP3R1P63098 170 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 DYRK1AQ13627 763 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 PMS2P11Q13670 270 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 PSG5Q15238 335 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 TATDN3Q17R31 274 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 CD300EQ496F6 205 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-213ENST00000476777 RPL39P5Q59GN2 51 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 MEDAGQ5VYS4 303 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 GLDNQ6ZMI3 551 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-213ENST00000476777 AMIGO2Q86SJ2 522 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 MRPL30Q8TCC3 161 aaKnown RBP8.57□□□□□ -1.04
BRCA1-213ENST00000476777 GPR148Q8TDV2 347 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 MYCBPQ99417 103 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-213ENST00000476777 RNF5Q99942 180 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 IMPAD1Q9NX62 359 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 SLC2A8Q9NY64 477 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 PEF1Q9UBV8 284 aaKnown RBP8.57□□□□□ -1.04
BRCA1-213ENST00000476777 PKHD1P08F94 4074 aa8.57□□□□□ -1.04
BRCA1-213ENST00000476777 VPS13DQ5THJ4 4388 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 UBE2QL1A1L167 161 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 NUPR2A6NF83 97 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 OR11H12B2RN74 326 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 H7C2Y5 167 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 RAB29O14966 203 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 SLC22A1O15245 554 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 FUT3P21217 361 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 FASP25445 335 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 MC5RP33032 325 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 GBX2P52951 348 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-213ENST00000476777 SSBP2P81877 361 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-213ENST00000476777 DEFA5Q01523 94 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 GPR176Q14439 515 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 FXYD3Q14802 87 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 DMKNQ6E0U4 476 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-213ENST00000476777 SIGIRRQ6IA17 410 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 ZNF343Q6P1L6 599 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 OR5AN1Q8NGI8 311 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 GRPEL2Q8TAA5 225 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 GHSRQ92847 366 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 GALMQ96C23 342 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 ORAI1Q96D31 301 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 ZNF184Q99676 751 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-213ENST00000476777 OVOL2Q9BRP0 275 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 ERVK13-1Q9NX77 482 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 PIPOXQ9P0Z9 390 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 AASSQ9UDR5 926 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 WASHC3Q9Y3C0 194 aa8.56□□□□□ -1.04
BRCA1-213ENST00000476777 FAM90A7PA6NKC0 464 aa8.55□□□□□ -1.04
BRCA1-213ENST00000476777 FAM90A23PA8MXZ1 464 aa8.55□□□□□ -1.04
BRCA1-213ENST00000476777 DEDDO75618 318 aa8.55□□□□□ -1.04
BRCA1-213ENST00000476777 GLAP06280 429 aa8.55□□□□□ -1.04
BRCA1-213ENST00000476777 IGFBP3P17936 291 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms