RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 CT45A1Q5HYN5 189 aa23.67■■□□□ 1.38
VEGFA-211ENST00000476772 ZBTB34Q8NCN2 500 aa23.67■■□□□ 1.38
VEGFA-211ENST00000476772 OR51H1Q8NH63 302 aa23.67■■□□□ 1.38
VEGFA-211ENST00000476772 CT45A3Q8NHU0 189 aa23.67■■□□□ 1.38
VEGFA-211ENST00000476772 FAM168AQ92567 244 aa23.67■■□□□ 1.38
VEGFA-211ENST00000476772 MARVELD3Q96A59 401 aa23.67■■□□□ 1.38
VEGFA-211ENST00000476772 SDHAF2Q9NX18 166 aa23.67■■□□□ 1.38
VEGFA-211ENST00000476772 PAX1P15863 534 aa23.67■■□□□ 1.38
VEGFA-211ENST00000476772 HLA-GP17693 338 aa23.67■■□□□ 1.38
VEGFA-211ENST00000476772 F2RP25116 425 aa23.67■■□□□ 1.38
VEGFA-211ENST00000476772 MSMO1Q15800 293 aa23.67■■□□□ 1.38
VEGFA-211ENST00000476772 LIAT1Q6ZQX7 453 aa23.67■■□□□ 1.38
VEGFA-211ENST00000476772 C11orf42Q8N5U0 333 aa23.67■■□□□ 1.38
VEGFA-211ENST00000476772 LY6G5BQ8NDX9 201 aa23.67■■□□□ 1.38
VEGFA-211ENST00000476772 MSI2Q96DH6 328 aaKnown RBP23.67■■□□□ 1.38
VEGFA-211ENST00000476772 PIMREGQ9BSJ6 248 aa23.67■■□□□ 1.38
VEGFA-211ENST00000476772 C17orf98A8MV24 154 aa23.66■■□□□ 1.38
VEGFA-211ENST00000476772 ADAP1O75689 374 aa23.66■■□□□ 1.38
VEGFA-211ENST00000476772 OR2A4O95047 310 aa23.66■■□□□ 1.38
VEGFA-211ENST00000476772 GIPP09681 153 aaPredicted RBP23.66■■□□□ 1.38
VEGFA-211ENST00000476772 GPR12P47775 334 aa23.66■■□□□ 1.38
VEGFA-211ENST00000476772 CLDND2Q8NHS1 167 aa23.66■■□□□ 1.38
VEGFA-211ENST00000476772 C10orf105Q8TEF2 133 aa23.66■■□□□ 1.38
VEGFA-211ENST00000476772 OR2A7Q96R45 310 aa23.66■■□□□ 1.38
VEGFA-211ENST00000476772 H0Y980 276 aa23.65■■□□□ 1.38
VEGFA-211ENST00000476772 RAB7AP51149 207 aa23.65■■□□□ 1.38
VEGFA-211ENST00000476772 EIF4EBP1Q13541 118 aaPredicted RBP23.65■■□□□ 1.38
VEGFA-211ENST00000476772 Q3ZCU0 254 aa23.65■■□□□ 1.38
VEGFA-211ENST00000476772 CLEC2AQ6UVW9 174 aa23.65■■□□□ 1.38
VEGFA-211ENST00000476772 BTNL3Q6UXE8 466 aa23.65■■□□□ 1.38
VEGFA-211ENST00000476772 GSX2Q9BZM3 304 aa23.65■■□□□ 1.38
VEGFA-211ENST00000476772 TMEM222Q9H0R3 208 aa23.65■■□□□ 1.38
VEGFA-211ENST00000476772 RAB18Q9NP72 206 aa23.65■■□□□ 1.38
VEGFA-211ENST00000476772 FBN2P35556 2912 aa23.64■■□□□ 1.38
VEGFA-211ENST00000476772 A0A1W2PPH5 198 aa23.64■■□□□ 1.38
VEGFA-211ENST00000476772 IGHV1-8P0DP01 117 aa23.64■■□□□ 1.38
VEGFA-211ENST00000476772 HIST2H2BCQ6DN03 193 aa23.64■■□□□ 1.38
VEGFA-211ENST00000476772 LHFPL5Q8TAF8 219 aa23.64■■□□□ 1.38
VEGFA-211ENST00000476772 RAB39BQ96DA2 213 aa23.64■■□□□ 1.38
VEGFA-211ENST00000476772 LOC105371242A0A075B767 164 aa23.64■■□□□ 1.37
VEGFA-211ENST00000476772 FAM25EA8MYX2 175 aa23.64■■□□□ 1.37
VEGFA-211ENST00000476772 HOXB5P09067 269 aa23.64■■□□□ 1.37
VEGFA-211ENST00000476772 ZFP69Q49AA0 526 aa23.64■■□□□ 1.37
VEGFA-211ENST00000476772 LGI3Q8N145 548 aa23.64■■□□□ 1.37
VEGFA-211ENST00000476772 LRTM2Q8N967 370 aa23.64■■□□□ 1.37
VEGFA-211ENST00000476772 SPG11Q96JI7 2443 aa23.63■■□□□ 1.37
VEGFA-211ENST00000476772 KIAA1324LA8MWY0 1029 aaPredicted RBP23.63■■□□□ 1.37
VEGFA-211ENST00000476772 NDUFS8O00217 210 aa23.63■■□□□ 1.37
VEGFA-211ENST00000476772 LIPFP07098 398 aa23.63■■□□□ 1.37
VEGFA-211ENST00000476772 UCP1P25874 307 aa23.63■■□□□ 1.37
VEGFA-211ENST00000476772 EIF2B2P49770 351 aaKnown RBP23.63■■□□□ 1.37
VEGFA-211ENST00000476772 LMO4P61968 165 aa23.63■■□□□ 1.37
VEGFA-211ENST00000476772 SLC25A48Q6ZT89 311 aaKnown RBP23.63■■□□□ 1.37
VEGFA-211ENST00000476772 METTL8Q9H825 291 aaKnown RBP23.63■■□□□ 1.37
VEGFA-211ENST00000476772 ARID1AO14497 2285 aa23.63■■□□□ 1.37
VEGFA-211ENST00000476772 ZNF16P17020 682 aaPredicted RBP23.62■■□□□ 1.37
VEGFA-211ENST00000476772 LIN7CQ9NUP9 197 aaKnown RBP23.62■■□□□ 1.37
VEGFA-211ENST00000476772 ZNRD1Q9P1U0 126 aa23.62■■□□□ 1.37
VEGFA-211ENST00000476772 SESN1Q9Y6P5 492 aa23.62■■□□□ 1.37
VEGFA-211ENST00000476772 RNF212BA8MTL3 300 aa23.61■■□□□ 1.37
VEGFA-211ENST00000476772 MPTX1A8MV57 137 aa23.61■■□□□ 1.37
VEGFA-211ENST00000476772 PROP1O75360 226 aa23.61■■□□□ 1.37
VEGFA-211ENST00000476772 ZFP36P26651 326 aaKnown RBP23.61■■□□□ 1.37
VEGFA-211ENST00000476772 RAP2BP61225 183 aa23.61■■□□□ 1.37
VEGFA-211ENST00000476772 RPL30P62888 115 aaKnown RBP23.61■■□□□ 1.37
VEGFA-211ENST00000476772 RPL39P5Q59GN2 51 aa23.61■■□□□ 1.37
VEGFA-211ENST00000476772 ODF3L1Q8IXM7 274 aa23.61■■□□□ 1.37
VEGFA-211ENST00000476772 OR2T35Q8NGX2 323 aa23.61■■□□□ 1.37
VEGFA-211ENST00000476772 SEC22AQ96IW7 307 aa23.61■■□□□ 1.37
VEGFA-211ENST00000476772 C18orf12Q96KH6 178 aa23.61■■□□□ 1.37
VEGFA-211ENST00000476772 PDCD10Q9BUL8 212 aa23.61■■□□□ 1.37
VEGFA-211ENST00000476772 ONECUT1Q9UBC0 465 aa23.61■■□□□ 1.37
VEGFA-211ENST00000476772 HELZ2Q9BYK8 2649 aaKnown RBP23.61■■□□□ 1.37
VEGFA-211ENST00000476772 C13orf42A0A1B0GVH6 325 aa23.6■■□□□ 1.37
VEGFA-211ENST00000476772 C5orf51A6NDU8 294 aa23.6■■□□□ 1.37
VEGFA-211ENST00000476772 VWC2LB2RUY7 222 aa23.6■■□□□ 1.37
VEGFA-211ENST00000476772 SRPXP78539 464 aa23.6■■□□□ 1.37
VEGFA-211ENST00000476772 C11orf91Q3C1V1 193 aa23.6■■□□□ 1.37
VEGFA-211ENST00000476772 TMEM268Q5VZI3 342 aa23.6■■□□□ 1.37
VEGFA-211ENST00000476772 GSG1LQ6UXU4 331 aa23.6■■□□□ 1.37
VEGFA-211ENST00000476772 LYG1Q8N1E2 194 aa23.6■■□□□ 1.37
VEGFA-211ENST00000476772 TMEM56Q96MV1 263 aa23.6■■□□□ 1.37
VEGFA-211ENST00000476772 TMEM56-RWDD3S4R434 201 aa23.6■■□□□ 1.37
VEGFA-211ENST00000476772 A0A087X0M5 115 aa23.6■■□□□ 1.37
VEGFA-211ENST00000476772 SAA2-SAA4A0A096LPE2 208 aa23.6■■□□□ 1.37
VEGFA-211ENST00000476772 A0A1B0GX30 115 aa23.6■■□□□ 1.37
VEGFA-211ENST00000476772 B3GALNT1O75752 331 aa23.6■■□□□ 1.37
VEGFA-211ENST00000476772 C1QBP02746 253 aa23.6■■□□□ 1.37
VEGFA-211ENST00000476772 SAA2P0DJI9 122 aaPredicted RBP23.6■■□□□ 1.37
VEGFA-211ENST00000476772 NKX2-5P52952 324 aaPredicted RBP23.6■■□□□ 1.37
VEGFA-211ENST00000476772 C1orf229Q6ZS94 237 aaPredicted RBP23.6■■□□□ 1.37
VEGFA-211ENST00000476772 LYZL2Q7Z4W2 148 aa23.6■■□□□ 1.37
VEGFA-211ENST00000476772 ARHGAP32A7KAX9 2087 aa23.59■■□□□ 1.37
VEGFA-211ENST00000476772 IGHV4-30-2A0A087WSY4 118 aa23.59■■□□□ 1.37
VEGFA-211ENST00000476772 CDS2O95674 445 aa23.59■■□□□ 1.37
VEGFA-211ENST00000476772 RBP4P02753 201 aa23.59■■□□□ 1.37
VEGFA-211ENST00000476772 DLX1P56177 255 aa23.59■■□□□ 1.37
VEGFA-211ENST00000476772 GGNBP1Q5YKI7 109 aa23.59■■□□□ 1.37
VEGFA-211ENST00000476772 ZNF66Q6ZN08 573 aa23.59■■□□□ 1.37
VEGFA-211ENST00000476772 ZNF695Q8IW36 515 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms