RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 MT-ND4LP03901 98 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 OR8U8P0C7N1 319 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 GCH1P30793 250 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 P2RY6Q15077 328 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 AKIRIN2Q53H80 203 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 MBNL2Q5VZF2 373 aaKnown RBP13.81□□□□□ -0.2
TMEM53-208ENST00000476724 TCTEX1D1Q8N7M0 179 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 FAM169BQ8N8A8 192 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 MBD3L2Q8NHZ7 208 aaPredicted RBP13.81□□□□□ -0.2
TMEM53-208ENST00000476724 C14orf79Q96F83 325 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 CLCC1Q96S66 551 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 RFNGQ9Y644 331 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 A6NLC8 198 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 FAM87AP0C7U9 286 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 CECR9P0C854 216 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 OR3A1P47881 315 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 HOXA1P49639 335 aaPredicted RBP13.81□□□□□ -0.2
TMEM53-208ENST00000476724 TMPRSS3P57727 454 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 CCL20P78556 96 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 RUNX1Q01196 453 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 FGFRL1Q8N441 504 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 CISD2Q8N5K1 135 aaKnown RBP13.81□□□□□ -0.2
TMEM53-208ENST00000476724 CD300LFQ8TDQ1 290 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 NINJ1Q92982 152 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 STARD4Q96DR4 205 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 RARRES2Q99969 163 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 PSMG3Q9BT73 122 aaPredicted RBP13.81□□□□□ -0.2
TMEM53-208ENST00000476724 PARD6GQ9BYG4 376 aaPredicted RBP13.81□□□□□ -0.2
TMEM53-208ENST00000476724 OPN3Q9H1Y3 402 aaPredicted RBP13.81□□□□□ -0.2
TMEM53-208ENST00000476724 PROCRQ9UNN8 238 aa13.81□□□□□ -0.2
TMEM53-208ENST00000476724 C12orf77C9JDV5 145 aa13.8□□□□□ -0.2
TMEM53-208ENST00000476724 OR13C7P0DN81 318 aa13.8□□□□□ -0.2
TMEM53-208ENST00000476724 RAB5BP61020 215 aa13.8□□□□□ -0.2
TMEM53-208ENST00000476724 CATR1Q13166 79 aa13.8□□□□□ -0.2
TMEM53-208ENST00000476724 IZUMO4Q1ZYL8 232 aa13.8□□□□□ -0.2
TMEM53-208ENST00000476724 WDR82Q6UXN9 313 aa13.8□□□□□ -0.2
TMEM53-208ENST00000476724 THNSL2Q86YJ6 484 aa13.8□□□□□ -0.2
TMEM53-208ENST00000476724 ZNF610Q8N9Z0 462 aa13.8□□□□□ -0.2
TMEM53-208ENST00000476724 SFT2D1Q8WV19 159 aa13.8□□□□□ -0.2
TMEM53-208ENST00000476724 LURAP1Q96LR2 239 aa13.8□□□□□ -0.2
TMEM53-208ENST00000476724 IGHV3-64DA0A0J9YX35 117 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 A0A1B0GV50 99 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 A0A1B0GWJ7 208 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 H3BP45 60 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 CGAP01215 116 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 HSPB1P04792 205 aaKnown RBP13.79□□□□□ -0.2
TMEM53-208ENST00000476724 TDGF1P3P51864 188 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 TMEM267Q0VDI3 215 aaPredicted RBP13.79□□□□□ -0.2
TMEM53-208ENST00000476724 SMIM21Q3B7S5 101 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 ZNF506Q5JVG8 444 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 ETV3LQ6ZN32 361 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 ZNF826PQ6ZT77 177 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 LINC00518Q8N0U6 118 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 OR1L1Q8NH94 360 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 UBALD1Q8TB05 177 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 PRR14LQ5THK1 2151 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 HBZP02008 142 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 CEBPDP49716 269 aaPredicted RBP13.79□□□□□ -0.2
TMEM53-208ENST00000476724 SERF2P84101 59 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 PAX5Q02548 391 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 KRTCAP3Q53RY4 240 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 C1orf185Q5T7R7 199 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 TRAT1Q6PIZ9 186 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 CXorf67Q86X51 503 aaPredicted RBP13.79□□□□□ -0.2
TMEM53-208ENST00000476724 HIST1H2BAQ96A08 127 aa13.79□□□□□ -0.2
TMEM53-208ENST00000476724 ZGRF1Q86YA3 2104 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 DSPP15924 2871 aaKnown RBP13.78□□□□□ -0.2
TMEM53-208ENST00000476724 C1orf196B1AJZ1 125 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 WNT9BO14905 357 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 PTAFRP25105 342 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 FABP6P51161 128 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 AESQ08117 197 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 LRRC75BQ2VPJ9 315 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 PRR30Q53SZ7 412 aaPredicted RBP13.78□□□□□ -0.2
TMEM53-208ENST00000476724 KHDC3LQ587J8 217 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 Q6ZR03 302 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 BEND4Q6ZU67 534 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 ZNF525Q8N782 197 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 COQ2Q96H96 371 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 OR2D2Q9H210 308 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 KIAA2026Q5HYC2 2103 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 IGHV2OR16-5A0A0B4J2B6 119 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 SRP19P09132 144 aaKnown RBP13.78□□□□□ -0.2
TMEM53-208ENST00000476724 IAPPP10997 89 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 AKR1C3P42330 323 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 GABRA2P47869 451 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 UBE2KP61086 200 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 EIF4EBP1Q13541 118 aaPredicted RBP13.78□□□□□ -0.2
TMEM53-208ENST00000476724 ZNF561Q8N587 486 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 FAM57AQ8TBR7 257 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 LAMP3Q9UQV4 416 aa13.78□□□□□ -0.2
TMEM53-208ENST00000476724 OR5H1A6NKK0 313 aa13.77□□□□□ -0.21
TMEM53-208ENST00000476724 PPIHO43447 177 aaKnown RBP13.77□□□□□ -0.21
TMEM53-208ENST00000476724 SCAF4O95104 1147 aaKnown RBP13.77□□□□□ -0.21
TMEM53-208ENST00000476724 METTL15P1P0C7V9 234 aa13.77□□□□□ -0.21
TMEM53-208ENST00000476724 KRBOX4Q5JUW0 171 aa13.77□□□□□ -0.21
TMEM53-208ENST00000476724 PRAMEF6Q5VXH4 476 aa13.77□□□□□ -0.21
TMEM53-208ENST00000476724 BHLHA15Q7RTS1 189 aaPredicted RBP13.77□□□□□ -0.21
TMEM53-208ENST00000476724 OR52L2PQ8NGH6 319 aa13.77□□□□□ -0.21
TMEM53-208ENST00000476724 CLDND2Q8NHS1 167 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms