RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 ZNF295-AS1Q8N0V1 137 aa13.96□□□□□ -0.17
TVP23B-202ENST00000476139 RBMXL3Q8N7X1 1067 aaKnown RBP13.96□□□□□ -0.17
TVP23B-202ENST00000476139 CACNG5Q9UF02 275 aa13.96□□□□□ -0.17
TVP23B-202ENST00000476139 ACAA1P09110 424 aaPredicted RBP13.96□□□□□ -0.17
TVP23B-202ENST00000476139 HOXA1P49639 335 aaPredicted RBP13.96□□□□□ -0.17
TVP23B-202ENST00000476139 FIP1L1Q6UN15 594 aaKnown RBP13.96□□□□□ -0.17
TVP23B-202ENST00000476139 Q6ZS92 163 aa13.96□□□□□ -0.17
TVP23B-202ENST00000476139 RFESDQ8TAC1 157 aa13.96□□□□□ -0.17
TVP23B-202ENST00000476139 SFT2D1Q8WV19 159 aa13.96□□□□□ -0.17
TVP23B-202ENST00000476139 GALMQ96C23 342 aa13.96□□□□□ -0.17
TVP23B-202ENST00000476139 SLC35B3Q9H1N7 401 aa13.96□□□□□ -0.17
TVP23B-202ENST00000476139 IAPPP10997 89 aa13.95□□□□□ -0.18
TVP23B-202ENST00000476139 COL10A1Q03692 680 aa13.95□□□□□ -0.18
TVP23B-202ENST00000476139 ZNF266Q14584 549 aa13.95□□□□□ -0.18
TVP23B-202ENST00000476139 C22orf34Q6ZV56 151 aa13.95□□□□□ -0.18
TVP23B-202ENST00000476139 DCTN5Q9BTE1 182 aa13.95□□□□□ -0.18
TVP23B-202ENST00000476139 KCNIP1Q9NZI2 227 aa13.95□□□□□ -0.18
TVP23B-202ENST00000476139 STRAPQ9Y3F4 350 aaKnown RBP13.95□□□□□ -0.18
TVP23B-202ENST00000476139 KLF2Q9Y5W3 355 aaPredicted RBP13.95□□□□□ -0.18
TVP23B-202ENST00000476139 TMEM30CPA0ZSE6 113 aa13.95□□□□□ -0.18
TVP23B-202ENST00000476139 M0R1B8 84 aa13.95□□□□□ -0.18
TVP23B-202ENST00000476139 RAMP3O60896 148 aa13.95□□□□□ -0.18
TVP23B-202ENST00000476139 SSTR5P35346 364 aa13.95□□□□□ -0.18
TVP23B-202ENST00000476139 LINC00205P59089 165 aa13.95□□□□□ -0.18
TVP23B-202ENST00000476139 OR2B11Q5JQS5 317 aa13.95□□□□□ -0.18
TVP23B-202ENST00000476139 MBNL2Q5VZF2 373 aaKnown RBP13.95□□□□□ -0.18
TVP23B-202ENST00000476139 VHLLQ6RSH7 139 aa13.95□□□□□ -0.18
TVP23B-202ENST00000476139 SLC25A31Q9H0C2 315 aa13.95□□□□□ -0.18
TVP23B-202ENST00000476139 HBZP02008 142 aa13.95□□□□□ -0.18
TVP23B-202ENST00000476139 NUBP1P53384 320 aa13.95□□□□□ -0.18
TVP23B-202ENST00000476139 SOHLH1Q5JUK2 328 aa13.95□□□□□ -0.18
TVP23B-202ENST00000476139 ZNF808Q8N4W9 903 aaPredicted RBP13.95□□□□□ -0.18
TVP23B-202ENST00000476139 CHD3Q12873 2000 aaKnown RBP13.94□□□□□ -0.18
TVP23B-202ENST00000476139 A0A1B0GU03 582 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 ZNF727A8MUV8 499 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 C1orf196B1AJZ1 125 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 TXNL1O43396 289 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 IL2RGP31785 369 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 SULT1A1P50225 295 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 RAB5BP61020 215 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 SPSB3Q6PJ21 355 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 RBMS3Q6XE24 437 aaKnown RBP13.94□□□□□ -0.18
TVP23B-202ENST00000476139 CD177Q8N6Q3 437 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 C5orf30Q96GV9 206 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 PBDC1Q9BVG4 233 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 OR2D2Q9H210 308 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 IGHV3-43A0A0B4J1X8 118 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 DEFB108AA8MXU0 73 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 IGHV3-43DP0DP04 118 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 PTAFRP25105 342 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 RAB5CP51148 216 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 SLC25A24Q6NUK1 477 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 THNSL2Q86YJ6 484 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 C15orf54Q8N8G6 183 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 LRRC29Q8WV35 223 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 COA4Q9NYJ1 87 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 ACACAQ13085 2346 aa13.94□□□□□ -0.18
TVP23B-202ENST00000476139 OR13A1Q8NGR1 328 aa13.93□□□□□ -0.18
TVP23B-202ENST00000476139 RBFOX3A6NFN3 312 aa13.93□□□□□ -0.18
TVP23B-202ENST00000476139 S100A6P06703 90 aa13.93□□□□□ -0.18
TVP23B-202ENST00000476139 EGR1P18146 543 aa13.93□□□□□ -0.18
TVP23B-202ENST00000476139 RPL30P62888 115 aaKnown RBP13.93□□□□□ -0.18
TVP23B-202ENST00000476139 SLC35E4Q6ICL7 350 aa13.93□□□□□ -0.18
TVP23B-202ENST00000476139 FGFRL1Q8N441 504 aa13.93□□□□□ -0.18
TVP23B-202ENST00000476139 COMMD1Q8N668 190 aa13.93□□□□□ -0.18
TVP23B-202ENST00000476139 PLPPR2Q96GM1 343 aa13.93□□□□□ -0.18
TVP23B-202ENST00000476139 ABHD14BQ96IU4 210 aa13.93□□□□□ -0.18
TVP23B-202ENST00000476139 APC2O95996 2303 aa13.93□□□□□ -0.18
TVP23B-202ENST00000476139 RELNP78509 3460 aa13.93□□□□□ -0.18
TVP23B-202ENST00000476139 BTNL3Q6UXE8 466 aa13.92□□□□□ -0.18
TVP23B-202ENST00000476139 RSG1Q9BU20 258 aa13.92□□□□□ -0.18
TVP23B-202ENST00000476139 WASF3Q9UPY6 502 aa13.92□□□□□ -0.18
TVP23B-202ENST00000476139 OOEPA6NGQ2 149 aa13.92□□□□□ -0.18
TVP23B-202ENST00000476139 FAM27E3Q08E93 113 aa13.92□□□□□ -0.18
TVP23B-202ENST00000476139 EDDM3AQ14507 147 aa13.92□□□□□ -0.18
TVP23B-202ENST00000476139 LTC4SQ16873 150 aa13.92□□□□□ -0.18
TVP23B-202ENST00000476139 METTL15P1P0C7V9 234 aa13.92□□□□□ -0.18
TVP23B-202ENST00000476139 EIF2S3LQ2VIR3 472 aaKnown RBP13.92□□□□□ -0.18
TVP23B-202ENST00000476139 AKR1C8PQ5T2L2 129 aa13.92□□□□□ -0.18
TVP23B-202ENST00000476139 CEP295Q9C0D2 2601 aa13.92□□□□□ -0.18
TVP23B-202ENST00000476139 IGHV3OR15-7A0A075B7D8 119 aa13.91□□□□□ -0.18
TVP23B-202ENST00000476139 KRASP01116 189 aa13.91□□□□□ -0.18
TVP23B-202ENST00000476139 TLE1Q04724 770 aa13.91□□□□□ -0.18
TVP23B-202ENST00000476139 SMIM21Q3B7S5 101 aa13.91□□□□□ -0.18
TVP23B-202ENST00000476139 SLC16A13Q7RTY0 426 aa13.91□□□□□ -0.18
TVP23B-202ENST00000476139 LIN7CQ9NUP9 197 aaKnown RBP13.91□□□□□ -0.18
TVP23B-202ENST00000476139 URGCP-MRPS24S4R325 110 aa13.91□□□□□ -0.18
TVP23B-202ENST00000476139 MT-ND4LP03901 98 aa13.91□□□□□ -0.18
TVP23B-202ENST00000476139 TUBG1P23258 451 aa13.91□□□□□ -0.18
TVP23B-202ENST00000476139 PRDX2P32119 198 aa13.91□□□□□ -0.18
TVP23B-202ENST00000476139 BRWD1-AS2P59051 145 aa13.91□□□□□ -0.18
TVP23B-202ENST00000476139 ZNF816Q0VGE8 651 aaPredicted RBP13.91□□□□□ -0.18
TVP23B-202ENST00000476139 ZNF645Q8N7E2 425 aa13.91□□□□□ -0.18
TVP23B-202ENST00000476139 SNIP1Q8TAD8 396 aaKnown RBP13.91□□□□□ -0.18
TVP23B-202ENST00000476139 PRR7Q8TB68 274 aa13.91□□□□□ -0.18
TVP23B-202ENST00000476139 LSM10Q969L4 123 aaKnown RBP13.91□□□□□ -0.18
TVP23B-202ENST00000476139 VSIRQ9H7M9 311 aa13.91□□□□□ -0.18
TVP23B-202ENST00000476139 TUBG2Q9NRH3 451 aa13.91□□□□□ -0.18
TVP23B-202ENST00000476139 MMP24Q9Y5R2 645 aa13.91□□□□□ -0.18
TVP23B-202ENST00000476139 SYNGR2O43760 224 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms