RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 CALYQ9NYX4 217 aa15.21■□□□□ 0.02
SEC61A2-213ENST00000475268 PVALBP20472 110 aaPredicted RBP15.2■□□□□ 0.02
SEC61A2-213ENST00000475268 APOBEC3AP31941 199 aaPredicted RBP15.2■□□□□ 0.02
SEC61A2-213ENST00000475268 RPL30P62888 115 aaKnown RBP15.2■□□□□ 0.02
SEC61A2-213ENST00000475268 ID3Q02535 119 aa15.2■□□□□ 0.02
SEC61A2-213ENST00000475268 AANATQ16613 207 aa15.2■□□□□ 0.02
SEC61A2-213ENST00000475268 CCL17Q92583 94 aa15.2■□□□□ 0.02
SEC61A2-213ENST00000475268 SDHAF2Q9NX18 166 aa15.2■□□□□ 0.02
SEC61A2-213ENST00000475268 JPT1Q9UK76 154 aa15.2■□□□□ 0.02
SEC61A2-213ENST00000475268 NBASA2RRP1 2371 aa15.2■□□□□ 0.02
SEC61A2-213ENST00000475268 RAI1Q7Z5J4 1906 aaPredicted RBP15.2■□□□□ 0.02
SEC61A2-213ENST00000475268 ITPR1Q14643 2758 aa15.2■□□□□ 0.02
SEC61A2-213ENST00000475268 A0A1B0GU03 582 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 I3L521 148 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 RAMP3O60896 148 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 IGKV1-5P01602 117 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 IGHV3-7P01780 117 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 CAV2P51636 162 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 EIF4EBP1Q13541 118 aaPredicted RBP15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 MORN2Q502X0 79 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 EDARADDQ8WWZ3 215 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 AGMATQ9BSE5 352 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 TMPRSS2O15393 492 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 LPAR6P43657 344 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 VAMP2P63027 116 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 EIF5AP63241 154 aaKnown RBP15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 NHLH2Q02577 135 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 Q3ZCU0 254 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 Q6ZRM9 215 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 TCTEX1D2Q8WW35 142 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 LSM10Q969L4 123 aaKnown RBP15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 LRRC46Q96FV0 321 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 FAM234AQ9H0X4 552 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 MS4A5Q9H3V2 200 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 C11orf1Q9H5F2 150 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 MED9Q9NWA0 146 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 CISD1Q9NZ45 108 aaKnown RBP15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 CACNG5Q9UF02 275 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 RNF115Q9Y4L5 304 aa15.19■□□□□ 0.02
SEC61A2-213ENST00000475268 TRGV10A0A0A0MS01 117 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 F2RL2O00254 374 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 WRBO00258 174 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 SIGLEC5O15389 551 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 LOXL3P58215 753 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 CATR1Q13166 79 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 MST1LQ2TV78 715 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 TOR2AQ5JU69 321 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 OR2C3Q8N628 320 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 REG4Q9BYZ8 158 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 NCOR1P1Q9H4R4 102 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 KCNJ16Q9NPI9 418 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 TRAV38-1A0A0B4J264 116 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 MFSD2BA6NFX1 497 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 FAM24AA6NFZ4 105 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 B8ZZF3 427 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 TMEM178BH3BS89 294 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 CHST1O43916 411 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 YPEL1O60688 119 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 PITX3O75364 302 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 JTBO76095 146 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 CLDN1O95832 211 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 SLC25A6P12236 298 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 ZNF816Q0VGE8 651 aaPredicted RBP15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 MSMO1Q15800 293 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 C17orf58Q2M2W7 97 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 C1orf87Q8N0U7 546 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 FGFRL1Q8N441 504 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 YPEL2Q96QA6 119 aa15.18■□□□□ 0.02
SEC61A2-213ENST00000475268 COL6A6A6NMZ7 2263 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 PKDREJQ9NTG1 2253 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 NKX6-3A6NJ46 265 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 B9A039 149 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 LGALS8O00214 317 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 CLDN14O95500 239 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 CGB3P0DN86 165 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 CGB7P0DN87 165 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 GPR12P47775 334 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 LINC00205P59089 165 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 SPAG16Q8N0X2 631 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 TMEM106BQ9NUM4 274 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 PPIAL4EA0A075B759 164 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 KBTBD11-OT1A0A1B0GTJ5 212 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 C17orf98A8MV24 154 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 PPIAL4DF5H284 164 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 SIAH2O43255 324 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 GAPDHP04406 335 aaKnown RBP15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 PPIAL4FP0DN26 164 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 NDUFB7P17568 137 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 EWSR1Q01844 656 aaKnown RBP eCLIP15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 EFNB3Q15768 340 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 CLN8Q9UBY8 286 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 PPIAL4AQ9Y536 164 aa15.17■□□□□ 0.02
SEC61A2-213ENST00000475268 ZNF134P52741 427 aa15.16■□□□□ 0.02
SEC61A2-213ENST00000475268 ZNF66Q6ZN08 573 aa15.16■□□□□ 0.02
SEC61A2-213ENST00000475268 RNF141Q8WVD5 230 aa15.16■□□□□ 0.02
SEC61A2-213ENST00000475268 LEAP2Q969E1 77 aa15.16■□□□□ 0.02
SEC61A2-213ENST00000475268 BARX1Q9HBU1 254 aaPredicted RBP15.16■□□□□ 0.02
SEC61A2-213ENST00000475268 WFDC1Q9HC57 220 aa15.16■□□□□ 0.02
SEC61A2-213ENST00000475268 LYRM2Q9NU23 88 aaPredicted RBP15.16■□□□□ 0.02
SEC61A2-213ENST00000475268 CACNA1AO00555 2505 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms