RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 SMLR1H3BR10 107 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 P2RY10O00398 339 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 DVL1O14640 695 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 ORC5O43913 435 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 SRSF10O75494 262 aaKnown RBP9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 BRI3O95415 125 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 IFNA5P01569 189 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 TTRP02766 147 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 CD5P06127 495 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 ANXA3P12429 323 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 ZNF44P15621 663 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 SNU13P55769 128 aaKnown RBP9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 FGF12P61328 243 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 MFGE8Q08431 387 aaPredicted RBP9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 PMS2P11Q13670 270 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 IRF3Q14653 427 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 C4orf48Q5BLP8 95 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 WDR38Q5JTN6 314 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 LDLRAD3Q86YD5 345 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 SIGLECL1Q8N7X8 197 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 SCCPDHQ8NBX0 429 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 OR5A2Q8NGI9 324 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 OR4D6Q8NGJ1 314 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 OR2G2Q8NGZ5 317 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 YIPF6Q96EC8 236 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 RNF125Q96EQ8 232 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 ATG101Q9BSB4 218 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 CHRDL1Q9BU40 450 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 DNAJC4Q9NNZ3 241 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 SMCO4Q9NRQ5 59 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 HSPB7Q9UBY9 170 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 MRM2Q9UI43 246 aaKnown RBP9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 PIGLQ9Y2B2 252 aa9.52□□□□□ -0.88
HLA-DOB-208ENST00000475235 TRBV7-9A0A0J9YWB2 115 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 ZNF732B4DXR9 585 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 EI24O14681 340 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 NDUFB3O43676 98 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 TCRBP04435 133 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 IGHV4-38-2P0DP08 117 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 RPA2P15927 270 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 GZMHP20718 246 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 CEACAM3P40198 252 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 RAB9AP51151 201 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 GPM6AP51674 278 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 HERV-K104P63124 156 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 SURF2Q15527 256 aaPredicted RBP9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 VAMP3Q15836 100 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 AKR1C8PQ5T2L2 129 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 ZNF684Q5T5D7 378 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 STUMQ69YW2 141 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 C12orf54Q6X4T0 127 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 MOB3CQ70IA8 216 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 RTN4RL2Q86UN3 420 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 ZDHHC22Q8N966 263 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 THAP6Q8TBB0 222 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 CCL13Q99616 98 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 OR51I2Q9H344 312 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 TMEM89A2RUT3 159 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 COLCA2A8K830 154 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 DLGAP1O14490 977 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 CA11O75493 328 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 SC5DO75845 299 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 TOX4O94842 621 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 KDM4BO94953 1096 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 NRASP01111 189 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 FAHP16930 419 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 PRTN3P24158 256 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 UBA52P62987 128 aaKnown RBP9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 PDCD1Q15116 288 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 LRRC10Q5BKY1 277 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 SLC25A30Q5SVS4 291 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 BATF2Q8N1L9 274 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 OR13C8Q8NGS7 320 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 OR10R2Q8NGX6 335 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 RORBQ92753 470 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 WDFY2Q96P53 400 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 TBX5Q99593 518 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 FGF23Q9GZV9 251 aaPredicted RBP9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 ESM1Q9NQ30 184 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 NLKQ9UBE8 527 aa9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 RPUSD1Q9UJJ7 312 aaKnown RBP9.51□□□□□ -0.89
HLA-DOB-208ENST00000475235 STAB1Q9NY15 2570 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 IGHV3OR16-10A0A075B7F0 116 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 RNASEK-C17orf49H0YIS7 233 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 CLDN34H7C241 214 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 M0R036 132 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 MAGEB4O15481 346 aaPredicted RBP9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 MPC2O95563 127 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 MMP9P14780 707 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 CCL1P22362 96 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 SNRPGP62308 76 aaKnown RBP9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 RNF151Q2KHN1 245 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 TMEM42Q69YG0 159 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 EIF5AL1Q6IS14 154 aaKnown RBP9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 Q6ZSR3 168 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 SSX6Q7RTT6 188 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 BCL6BQ8N143 479 aaPredicted RBP9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 CBR4Q8N4T8 237 aa9.5□□□□□ -0.89
HLA-DOB-208ENST00000475235 FAM216BQ8N7L0 139 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms