RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 TMEM56Q96MV1 263 aa5.44□□□□□ -1.54
ATG4A-207ENST00000474825 FYTTD1Q96QD9 318 aaKnown RBP5.44□□□□□ -1.54
ATG4A-207ENST00000474825 PHB2Q99623 299 aa5.44□□□□□ -1.54
ATG4A-207ENST00000474825 SSBP4Q9BWG4 385 aaPredicted RBP5.44□□□□□ -1.54
ATG4A-207ENST00000474825 ZNF436Q9C0F3 470 aaPredicted RBP5.44□□□□□ -1.54
ATG4A-207ENST00000474825 SLC5A7Q9GZV3 580 aa5.44□□□□□ -1.54
ATG4A-207ENST00000474825 GAL3ST2Q9H3Q3 398 aa5.44□□□□□ -1.54
ATG4A-207ENST00000474825 RANGRFQ9HD47 186 aaPredicted RBP5.44□□□□□ -1.54
ATG4A-207ENST00000474825 RAB18Q9NP72 206 aa5.44□□□□□ -1.54
ATG4A-207ENST00000474825 OR2S2Q9NQN1 319 aa5.44□□□□□ -1.54
ATG4A-207ENST00000474825 CCL28Q9NRJ3 127 aa5.44□□□□□ -1.54
ATG4A-207ENST00000474825 C19orf12Q9NSK7 152 aa5.44□□□□□ -1.54
ATG4A-207ENST00000474825 ING3Q9NXR8 418 aa5.44□□□□□ -1.54
ATG4A-207ENST00000474825 IDI2-AS1Q9NZ38 188 aa5.44□□□□□ -1.54
ATG4A-207ENST00000474825 KCNIP3Q9Y2W7 256 aa5.44□□□□□ -1.54
ATG4A-207ENST00000474825 POLR3KQ9Y2Y1 108 aaPredicted RBP5.44□□□□□ -1.54
ATG4A-207ENST00000474825 TMEM56-RWDD3S4R434 201 aa5.44□□□□□ -1.54
ATG4A-207ENST00000474825 C3orf85A0A1B0GTC6 90 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 DUXBA0A1W2PPF3 345 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 A8MXK9 166 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 H0Y980 276 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 HSPA12AO43301 675 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 PPIHO43447 177 aaKnown RBP5.43□□□□□ -1.54
ATG4A-207ENST00000474825 CDS2O95674 445 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 IGHV4-39P01824 125 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 C1QBP02746 253 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 OR8U9P0C7N5 309 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 ANXA3P12429 323 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 F2RP25116 425 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 PPP1CCP36873 323 aaKnown RBP5.43□□□□□ -1.54
ATG4A-207ENST00000474825 GPR6P46095 362 aaPredicted RBP5.43□□□□□ -1.54
ATG4A-207ENST00000474825 GZMKP49863 264 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 ZNF134P52741 427 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 ZNF137PP52743 207 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 RAP2BP61225 183 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 PAX2Q02962 417 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 ZNF273Q14593 569 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 CT45A1Q5HYN5 189 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 FAM53AQ6NSI3 398 aaPredicted RBP5.43□□□□□ -1.54
ATG4A-207ENST00000474825 C1orf122Q6ZSJ8 110 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 SLC25A48Q6ZT89 311 aaKnown RBP5.43□□□□□ -1.54
ATG4A-207ENST00000474825 TBC1D26Q86UD7 250 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 CMTM1Q8IZ96 169 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 PRR18Q8N4B5 295 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.43□□□□□ -1.54
ATG4A-207ENST00000474825 OR8B3Q8NGG8 313 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 OR8U1Q8NH10 309 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 CT45A3Q8NHU0 189 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 COQ8AQ8NI60 647 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 RFESDQ8TAC1 157 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 UBALD1Q8TB05 177 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 SECTM1Q8WVN6 248 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 C5orf30Q96GV9 206 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 C18orf12Q96KH6 178 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 ZNF714Q96N38 554 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 OR8B2Q96RD0 313 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 TP53RKQ96S44 253 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 ZNF251Q9BRH9 671 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 GSX2Q9BZM3 304 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 TMEM222Q9H0R3 208 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 IFI27L2Q9H2X8 130 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 UNKLQ9H9P5 680 aaKnown RBP5.43□□□□□ -1.54
ATG4A-207ENST00000474825 BARX1Q9HBU1 254 aaPredicted RBP5.43□□□□□ -1.54
ATG4A-207ENST00000474825 VPS13CQ709C8 3753 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 CELSR2Q9HCU4 2923 aa5.43□□□□□ -1.54
ATG4A-207ENST00000474825 PIGBOS1A0A0B4J2F0 54 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 KIAA1324LA8MWY0 1029 aaPredicted RBP5.42□□□□□ -1.54
ATG4A-207ENST00000474825 BOLA2-SMG1P6H3BVE0 249 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 MMP23AO75900 390 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 IGHV2-5P01817 119 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 HNRNPCP07910 306 aaKnown RBP eCLIP5.42□□□□□ -1.54
ATG4A-207ENST00000474825 OR5AC1P0C628 307 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 NDUFB7P17568 137 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 VAMP1P23763 118 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 SSTR2P30874 369 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 PDLIM4P50479 330 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 RAB7AP51149 207 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 BRWD1-AS2P59051 145 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 LMO4P61968 165 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 SRPXP78539 464 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 CD83Q01151 205 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 ABCA11PQ4W5N1 156 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 ZNF585BQ52M93 769 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 PHLDA2Q53GA4 152 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 ESCO2Q56NI9 601 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 AVPI1Q5T686 147 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 DCAF12L2Q5VW00 463 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 ZNF66Q6ZN08 573 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 NLRC3Q7RTR2 1065 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 ODF3L1Q8IXM7 274 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 LGI3Q8N145 548 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 KIR3DL3Q8N743 410 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 LHFPL5Q8TAF8 219 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 C10orf105Q8TEF2 133 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 TNFRSF14Q92956 283 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 NINJ1Q92982 152 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 C1orf159Q96HA4 380 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 CCL19Q99731 98 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 SDHAF2Q9NX18 166 aa5.42□□□□□ -1.54
ATG4A-207ENST00000474825 AKAP9Q99996 3911 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms