RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 SIGLEC5O15389 551 aa18.12■□□□□ 0.49
CCM2-206ENST00000474617 DFFBO76075 338 aa18.12■□□□□ 0.49
CCM2-206ENST00000474617 SPP1P10451 314 aa18.12■□□□□ 0.49
CCM2-206ENST00000474617 PPP1CCP36873 323 aaKnown RBP18.12■□□□□ 0.49
CCM2-206ENST00000474617 KIR2DS2P43631 304 aa18.12■□□□□ 0.49
CCM2-206ENST00000474617 MIDNQ504T8 468 aa18.12■□□□□ 0.49
CCM2-206ENST00000474617 COMMD1Q8N668 190 aa18.12■□□□□ 0.49
CCM2-206ENST00000474617 OR10A7Q8NGE5 316 aa18.12■□□□□ 0.49
CCM2-206ENST00000474617 WFIKKN1Q96NZ8 548 aa18.12■□□□□ 0.49
CCM2-206ENST00000474617 AGMATQ9BSE5 352 aa18.12■□□□□ 0.49
CCM2-206ENST00000474617 PARP12Q9H0J9 701 aaKnown RBP18.12■□□□□ 0.49
CCM2-206ENST00000474617 CALYQ9NYX4 217 aa18.12■□□□□ 0.49
CCM2-206ENST00000474617 CADP27708 2225 aa18.11■□□□□ 0.49
CCM2-206ENST00000474617 FAM90A9PA6NNJ1 464 aa18.11■□□□□ 0.49
CCM2-206ENST00000474617 LGALS8O00214 317 aa18.11■□□□□ 0.49
CCM2-206ENST00000474617 RBFOX2O43251 390 aaKnown RBP eCLIP18.11■□□□□ 0.495e-6■■■■■ 29.4
CCM2-206ENST00000474617 CLDN1O95832 211 aa18.11■□□□□ 0.49
CCM2-206ENST00000474617 IGKV1-39P01597 117 aa18.11■□□□□ 0.49
CCM2-206ENST00000474617 IGKV1D-39P04432 117 aa18.11■□□□□ 0.49
CCM2-206ENST00000474617 CGB3P0DN86 165 aa18.11■□□□□ 0.49
CCM2-206ENST00000474617 CGB7P0DN87 165 aa18.11■□□□□ 0.49
CCM2-206ENST00000474617 ZNF16P17020 682 aaPredicted RBP18.11■□□□□ 0.49
CCM2-206ENST00000474617 CD80P33681 288 aa18.11■□□□□ 0.49
CCM2-206ENST00000474617 LPAR6P43657 344 aa18.11■□□□□ 0.49
CCM2-206ENST00000474617 SWI5Q1ZZU3 235 aa18.11■□□□□ 0.49
CCM2-206ENST00000474617 MORN2Q502X0 79 aa18.11■□□□□ 0.49
CCM2-206ENST00000474617 GPHA2Q96T91 129 aa18.11■□□□□ 0.49
CCM2-206ENST00000474617 CACNG5Q9UF02 275 aa18.11■□□□□ 0.49
CCM2-206ENST00000474617 ZNF729A6NN14 1252 aaPredicted RBP18.1■□□□□ 0.49
CCM2-206ENST00000474617 TRIM77I1YAP6 450 aa18.1■□□□□ 0.49
CCM2-206ENST00000474617 SYNGR2O43760 224 aa18.1■□□□□ 0.49
CCM2-206ENST00000474617 CHST1O43916 411 aa18.1■□□□□ 0.49
CCM2-206ENST00000474617 CLDN14O95500 239 aa18.1■□□□□ 0.49
CCM2-206ENST00000474617 IGKV1-5P01602 117 aa18.1■□□□□ 0.49
CCM2-206ENST00000474617 CD3EP07766 207 aa18.1■□□□□ 0.49
CCM2-206ENST00000474617 GPR12P47775 334 aa18.1■□□□□ 0.49
CCM2-206ENST00000474617 F2RL1P55085 397 aa18.1■□□□□ 0.49
CCM2-206ENST00000474617 TLE1Q04724 770 aa18.1■□□□□ 0.49
CCM2-206ENST00000474617 FGFRL1Q8N441 504 aa18.1■□□□□ 0.49
CCM2-206ENST00000474617 UBALD1Q8TB05 177 aa18.1■□□□□ 0.49
CCM2-206ENST00000474617 TCTEX1D2Q8WW35 142 aa18.1■□□□□ 0.49
CCM2-206ENST00000474617 GNPNAT1Q96EK6 184 aaPredicted RBP18.1■□□□□ 0.49
CCM2-206ENST00000474617 SAP30LQ9HAJ7 183 aa18.1■□□□□ 0.49
CCM2-206ENST00000474617 IGHV3OR15-7A0A075B7D8 119 aa18.09■□□□□ 0.49
CCM2-206ENST00000474617 KBTBD11-OT1A0A1B0GTJ5 212 aa18.09■□□□□ 0.49
CCM2-206ENST00000474617 KIAA1324LA8MWY0 1029 aaPredicted RBP18.09■□□□□ 0.49
CCM2-206ENST00000474617 B9A039 149 aa18.09■□□□□ 0.49
CCM2-206ENST00000474617 UMAD1C9J7I0 102 aa18.09■□□□□ 0.49
CCM2-206ENST00000474617 M6PRP20645 277 aa18.09■□□□□ 0.49
CCM2-206ENST00000474617 EDDM3BP56851 147 aa18.09■□□□□ 0.49
CCM2-206ENST00000474617 MEF2CQ06413 473 aaPredicted RBP18.09■□□□□ 0.49
CCM2-206ENST00000474617 ZNRF1Q8ND25 227 aa18.09■□□□□ 0.49
CCM2-206ENST00000474617 OR1S2Q8NGQ3 325 aa18.09■□□□□ 0.49
CCM2-206ENST00000474617 GAFA1Q96PS6 74 aa18.09■□□□□ 0.49
CCM2-206ENST00000474617 CLN8Q9UBY8 286 aa18.09■□□□□ 0.49
CCM2-206ENST00000474617 RAB29O14966 203 aa18.08■□□□□ 0.49
CCM2-206ENST00000474617 P0C879 139 aa18.08■□□□□ 0.49
CCM2-206ENST00000474617 APOBEC3AP31941 199 aaPredicted RBP18.08■□□□□ 0.49
CCM2-206ENST00000474617 SULT1A1P50225 295 aa18.08■□□□□ 0.49
CCM2-206ENST00000474617 SPRNQ5BIV9 151 aa18.08■□□□□ 0.49
CCM2-206ENST00000474617 SPAG16Q8N0X2 631 aa18.08■□□□□ 0.49
CCM2-206ENST00000474617 TPRX1Q8N7U7 411 aa18.08■□□□□ 0.49
CCM2-206ENST00000474617 SMIM3Q9BZL3 60 aa18.08■□□□□ 0.49
CCM2-206ENST00000474617 PSG11Q9UQ72 335 aa18.08■□□□□ 0.49
CCM2-206ENST00000474617 hADV38S2A0JD32 116 aa18.08■□□□□ 0.48
CCM2-206ENST00000474617 IGSF23A1L1A6 192 aa18.08■□□□□ 0.48
CCM2-206ENST00000474617 FAM24AA6NFZ4 105 aa18.08■□□□□ 0.48
CCM2-206ENST00000474617 SHISA9B4DS77 424 aa18.08■□□□□ 0.48
CCM2-206ENST00000474617 DANCRP0C864 163 aa18.08■□□□□ 0.48
CCM2-206ENST00000474617 EPHA1P21709 976 aa18.08■□□□□ 0.48
CCM2-206ENST00000474617 LOXL3P58215 753 aa18.08■□□□□ 0.48
CCM2-206ENST00000474617 NHLH2Q02577 135 aa18.08■□□□□ 0.48
CCM2-206ENST00000474617 PJVKQ0ZLH3 352 aa18.08■□□□□ 0.48
CCM2-206ENST00000474617 Q3ZCU0 254 aa18.08■□□□□ 0.48
CCM2-206ENST00000474617 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.08■□□□□ 0.48
CCM2-206ENST00000474617 GFOD1Q9NXC2 390 aa18.08■□□□□ 0.48
CCM2-206ENST00000474617 RNF150Q9ULK6 438 aa18.08■□□□□ 0.48
CCM2-206ENST00000474617 PRELID3BQ9Y3B1 194 aa18.08■□□□□ 0.48
CCM2-206ENST00000474617 PLCE1Q9P212 2302 aa18.07■□□□□ 0.48
CCM2-206ENST00000474617 TLN1Q9Y490 2541 aaKnown RBP18.07■□□□□ 0.48
CCM2-206ENST00000474617 A0A0G2JRQ6 117 aa18.07■□□□□ 0.48
CCM2-206ENST00000474617 TXNL1O43396 289 aa18.07■□□□□ 0.48
CCM2-206ENST00000474617 NDUFA2O43678 99 aa18.07■□□□□ 0.48
CCM2-206ENST00000474617 HBG1P69891 147 aa18.07■□□□□ 0.48
CCM2-206ENST00000474617 HBG2P69892 147 aa18.07■□□□□ 0.48
CCM2-206ENST00000474617 ADAM5Q6NVV9 412 aa18.07■□□□□ 0.48
CCM2-206ENST00000474617 LYPD6BQ8NI32 183 aa18.07■□□□□ 0.48
CCM2-206ENST00000474617 RFESDQ8TAC1 157 aa18.07■□□□□ 0.48
CCM2-206ENST00000474617 ADTRPQ96IZ2 230 aa18.07■□□□□ 0.48
CCM2-206ENST00000474617 CIB3Q96Q77 187 aaPredicted RBP18.07■□□□□ 0.48
CCM2-206ENST00000474617 MAGT1Q9H0U3 335 aa18.07■□□□□ 0.48
CCM2-206ENST00000474617 HSPB7Q9UBY9 170 aa18.07■□□□□ 0.48
CCM2-206ENST00000474617 KIAA2026Q5HYC2 2103 aa18.06■□□□□ 0.48
CCM2-206ENST00000474617 CCL21O00585 134 aa18.06■□□□□ 0.48
CCM2-206ENST00000474617 FSTL3O95633 263 aa18.06■□□□□ 0.48
CCM2-206ENST00000474617 CYB5R3P00387 301 aaPredicted RBP18.06■□□□□ 0.48
CCM2-206ENST00000474617 PXDC1Q5TGL8 231 aa18.06■□□□□ 0.48
CCM2-206ENST00000474617 ZNF808Q8N4W9 903 aaPredicted RBP18.06■□□□□ 0.48
CCM2-206ENST00000474617 ATP5SQ99766 215 aa18.06■□□□□ 0.48
CCM2-206ENST00000474617 WFDC1Q9HC57 220 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms