RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 GVINP1Q7Z2Y8 2422 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 FRYQ5TBA9 3013 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 IGHV3OR15-7A0A075B7D8 119 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 FAM157AC9JC47 383 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 TRIM77I1YAP6 450 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 ATG12O94817 140 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 CD5P06127 495 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 MUC1P15941 1255 aaPredicted RBP8.15□□□□□ -1.1
USP39-214ENST00000474572 EPHA1P21709 976 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 ATP6V0CP27449 155 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 SULT1A1P50225 295 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 DYNLT3P51808 116 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 SRSF3P84103 164 aaKnown RBP8.15□□□□□ -1.1
USP39-214ENST00000474572 ADIPOQQ15848 244 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 C17orf58Q2M2W7 97 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 TMEM30BQ3MIR4 351 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 MORN2Q502X0 79 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 ALKBH2Q6NS38 261 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 OR5C1Q8NGR4 320 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 CORO2AQ92828 525 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 GAFA1Q96PS6 74 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 ATP5SQ99766 215 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 SCRT1Q9BWW7 348 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 PARD6GQ9BYG4 376 aaPredicted RBP8.15□□□□□ -1.1
USP39-214ENST00000474572 LINC00574Q9H8X3 128 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 RAB9BQ9NP90 201 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 CALYQ9NYX4 217 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 HSPB7Q9UBY9 170 aa8.15□□□□□ -1.1
USP39-214ENST00000474572 KIAA2026Q5HYC2 2103 aa8.15□□□□□ -1.11
USP39-214ENST00000474572 DSCAMO60469 2012 aa8.15□□□□□ -1.11
USP39-214ENST00000474572 AKAP13Q12802 2813 aa8.15□□□□□ -1.11
USP39-214ENST00000474572 ZFHX4Q86UP3 3567 aa8.15□□□□□ -1.11
USP39-214ENST00000474572 IGHV3-43A0A0B4J1X8 118 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 LINC00473A8K010 186 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 C17orf100A8MU93 164 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 C17orf98A8MV24 154 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 UMAD1C9J7I0 102 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 SIGLEC5O15389 551 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 RBFOX2O43251 390 aaKnown RBP eCLIP8.14□□□□□ -1.11
USP39-214ENST00000474572 PPIHO43447 177 aaKnown RBP8.14□□□□□ -1.11
USP39-214ENST00000474572 RAMP3O60896 148 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 PROP1O75360 226 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 DFFBO76075 338 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 S1PR2O95136 353 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 CLDN14O95500 239 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 CLDN1O95832 211 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 OR8U8P0C7N1 319 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 FAM87AP0C7U9 286 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 IGHV3-43DP0DP04 118 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 ZNF16P17020 682 aaPredicted RBP8.14□□□□□ -1.11
USP39-214ENST00000474572 DUTP33316 252 aaKnown RBP8.14□□□□□ -1.11
USP39-214ENST00000474572 ARHGDIBP52566 201 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 BSPH1Q075Z2 132 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 EDDM3AQ14507 147 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 IZUMO4Q1ZYL8 232 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 FBXL19-AS1Q494R0 122 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 AARDQ4LEZ3 155 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 TCF23Q7RTU1 214 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 WFDC8Q8IUA0 241 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 ZNRF1Q8ND25 227 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 RNASE11Q8TAA1 199 aaKnown RBP8.14□□□□□ -1.11
USP39-214ENST00000474572 RND1Q92730 232 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 GNPNAT1Q96EK6 184 aaPredicted RBP8.14□□□□□ -1.11
USP39-214ENST00000474572 SEC11CQ9BY50 192 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 MS4A7Q9GZW8 240 aaPredicted RBP8.14□□□□□ -1.11
USP39-214ENST00000474572 SH3BGRL3Q9H299 93 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 IFI27L2Q9H2X8 130 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 HRH4Q9H3N8 390 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 ZNF665Q9H7R5 613 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 C19orf12Q9NSK7 152 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 UQCC1Q9NVA1 299 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 RNF150Q9ULK6 438 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 DYSFO75923 2080 aa8.14□□□□□ -1.11
USP39-214ENST00000474572 CEP250Q9BV73 2442 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 A0A1B0GW64 132 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 LRRC30A6NM36 301 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 FAM90A9PA6NNJ1 464 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 RNASEK-C17orf49H0YIS7 233 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 ST8SIA5O15466 376 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 CST7O76096 145 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 NXPH3O95157 252 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 CYB5R3P00387 301 aaPredicted RBP8.13□□□□□ -1.11
USP39-214ENST00000474572 APOC3P02656 99 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 TNFRSF1AP19438 455 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 SNCAP37840 140 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 ID4P47928 161 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 ASCL1P50553 236 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 DVL1P1P54792 670 aaPredicted RBP8.13□□□□□ -1.11
USP39-214ENST00000474572 TNFRSF9Q07011 255 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 CLINT1Q14677 625 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 Q3ZCU0 254 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 FAM201AQ5SY85 155 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 NCMAPQ5T1S8 102 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 ATRAIDQ6UW56 229 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 TMEM14EPQ6UXP3 125 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 HAPLN4Q86UW8 402 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 STX12Q86Y82 276 aa8.13□□□□□ -1.11
USP39-214ENST00000474572 DMRTC2Q8IXT2 367 aaPredicted RBP8.13□□□□□ -1.11
USP39-214ENST00000474572 ZNF808Q8N4W9 903 aaPredicted RBP8.13□□□□□ -1.11
USP39-214ENST00000474572 ZNF525Q8N782 197 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms