RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 DUX4L3P0CJ86 424 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 DUX4L4P0CJ87 422 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 DUX4L5P0CJ88 424 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 DUX4L6P0CJ89 424 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 DUX4L7P0CJ90 424 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 SELLP14151 372 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 PI3P19957 117 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 GNRHRP30968 328 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 GZMKP49863 264 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 THOC7Q6I9Y2 204 aaKnown RBP11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 DUX4L9Q6RFH8 374 aaPredicted RBP11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 ZNF66Q6ZN08 573 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 LIAT1Q6ZQX7 453 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 KRTAP1-3Q8IUG1 177 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 ZNF695Q8IW36 515 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 OR13A1Q8NGR1 328 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 CLDND2Q8NHS1 167 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 THAP6Q8TBB0 222 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 NEIL1Q96FI4 390 aaPredicted RBP11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 DMRTB1Q96MA1 342 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 ZNF714Q96N38 554 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 FYTTD1Q96QD9 318 aaKnown RBP11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 HSD17B10Q99714 261 aaKnown RBP11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 CHIAQ9BZP6 476 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 DUX4Q9UBX2 424 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 MED13LQ71F56 2210 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 MALRD1Q5VYJ5 2156 aa11.33□□□□□ -0.6
LDLRAP1-204ENST00000474283 VPS13CQ709C8 3753 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 IGHV4-61A0A0C4DH41 118 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 IGKV1-6A0A0C4DH72 117 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 DBX1A6NMT0 343 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 RNF223E7ERA6 249 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 RBP4P02753 201 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 RLN2P04090 185 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 CXCL3P19876 107 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 F2RP25116 425 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 KIR2DS2P43631 304 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 SRSF4Q08170 494 aaKnown RBP11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 TBC1D26Q86UD7 250 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 WFDC11Q8NEX6 87 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 OR1L1Q8NH94 360 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 RNASE11Q8TAA1 199 aaKnown RBP11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 H1FXQ92522 213 aaKnown RBP11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 TMEM230Q96A57 120 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 ADTRPQ96IZ2 230 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 C2orf50Q96LR7 162 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 TMEM222Q9H0R3 208 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 LINC00574Q9H8X3 128 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 PATZ1Q9HBE1 687 aaKnown RBP11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 IDI2-AS1Q9NZ38 188 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 CTSZQ9UBR2 303 aa11.32□□□□□ -0.6
LDLRAP1-204ENST00000474283 C13orf42A0A1B0GVH6 325 aa11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 C15orf65H3BRN8 121 aa11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 DVL1O14640 695 aa11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 HSD17B6O14756 317 aa11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 TNFRSF13BO14836 293 aaPredicted RBP11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 CDS2O95674 445 aa11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 IGHV2-5P01817 119 aa11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 OR8U9P0C7N5 309 aa11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 USF1P22415 310 aaPredicted RBP11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 SSTR5P35346 364 aa11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 GPR12P47775 334 aa11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 SUPT4H1P63272 117 aaKnown RBP11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 Q6ZPA2 131 aa11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 LDLRAD3Q86YD5 345 aa11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 FGFRL1Q8N441 504 aa11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 DRAXINQ8NBI3 349 aaPredicted RBP11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 OR8U1Q8NH10 309 aa11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 AIFM2Q9BRQ8 373 aa11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 OR2D2Q9H210 308 aa11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 PIPOXQ9P0Z9 390 aa11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 OR1A1Q9P1Q5 309 aa11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 PRELID3BQ9Y3B1 194 aa11.31□□□□□ -0.6
LDLRAP1-204ENST00000474283 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.3□□□□□ -0.62e-7■■■□□ 15.8
LDLRAP1-204ENST00000474283 CSMD1Q96PZ7 3565 aa11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 HMSDA8MTL9 139 aa11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 PGLYRP1O75594 196 aaPredicted RBP11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 OR5AC1P0C628 307 aa11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 IL3RAP26951 378 aa11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 GNB2P62879 340 aa11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 TAGLNQ01995 201 aaKnown RBP11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 HEPN1Q6WQI6 88 aa11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 ZNF818PQ6ZRF7 136 aa11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 INO80EQ8NBZ0 244 aaPredicted RBP11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 MAPK1IP1LQ8NDC0 245 aa11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 RBPMSQ93062 196 aaKnown RBP11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 RRNAD1Q96FB5 475 aaKnown RBP11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 ABHD14BQ96IU4 210 aa11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 S1PR3Q99500 378 aa11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 REG4Q9BYZ8 158 aa11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 CCL28Q9NRJ3 127 aa11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 GFOD1Q9NXC2 390 aa11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 GAB2Q9UQC2 676 aa11.3□□□□□ -0.6
LDLRAP1-204ENST00000474283 FLNAP21333 2647 aaKnown RBP11.29□□□□□ -0.6
LDLRAP1-204ENST00000474283 TRAV39A0A0B4J263 110 aa11.29□□□□□ -0.6
LDLRAP1-204ENST00000474283 F5H0A9 414 aaPredicted RBP11.29□□□□□ -0.6
LDLRAP1-204ENST00000474283 RAB29O14966 203 aa11.29□□□□□ -0.6
LDLRAP1-204ENST00000474283 PVALBP20472 110 aaPredicted RBP11.29□□□□□ -0.6
LDLRAP1-204ENST00000474283 VDAC1P21796 283 aa11.29□□□□□ -0.6
LDLRAP1-204ENST00000474283 UCP1P25874 307 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms