RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 A0A0J9YXV3 536 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 GNG14A0A1W2PPG7 69 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 TMEM72A0PK05 275 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 NAP1L6A6NFF2 107 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 G3V3Q6 166 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 UBFD1O14562 309 aaKnown RBP2.82□□□□□ -1.96
BRCA1-212ENST00000473961 ITGB1BP1O14713 200 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 CBR3O75828 277 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 OR2A4O95047 310 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 DNAH10OSP0CZ25 163 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 ZNF14P17017 642 aaPredicted RBP2.82□□□□□ -1.96
BRCA1-212ENST00000473961 G0S2P27469 103 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 S100A2P29034 98 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 OMPP47874 163 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 CDC42P60953 191 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 CRADDP78560 199 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 PITPNAQ00169 270 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 RPL18AQ02543 176 aaKnown RBP2.82□□□□□ -1.96
BRCA1-212ENST00000473961 TNFRSF9Q07011 255 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 ZNHIT3Q15649 155 aaPredicted RBP2.82□□□□□ -1.96
BRCA1-212ENST00000473961 ZNF660Q6AZW8 331 aaPredicted RBP2.82□□□□□ -1.96
BRCA1-212ENST00000473961 CLEC6AQ6EIG7 209 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 ALKAL2Q6UX46 152 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 LRRN1Q6UXK5 716 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 CASP12Q6UXS9 341 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 SPNS3Q6ZMD2 512 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 ANGPTL5Q86XS5 388 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 ZFP82Q8N141 532 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 OR6V1Q8N148 313 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 FAM86B1Q8N7N1 296 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 Q8N7P7 452 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 C11orf72Q8NBR9 251 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 OR6K2Q8NGY2 324 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 STOML3Q8TAV4 291 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 GNPDA2Q8TDQ7 276 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 PTX4Q96A99 478 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 S100PBPQ96BU1 408 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 MALSU1Q96EH3 234 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 ZNF799Q96GE5 643 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 OR2A7Q96R45 310 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 TMED9Q9BVK6 235 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 SEC11CQ9BY50 192 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 SPACA1Q9HBV2 294 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 CSNK1G1Q9HCP0 422 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 NLE1Q9NVX2 485 aaPredicted RBP2.82□□□□□ -1.96
BRCA1-212ENST00000473961 TXNL4BQ9NX01 149 aaKnown RBP2.82□□□□□ -1.96
BRCA1-212ENST00000473961 C1orf109Q9NX04 203 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 MS4A12Q9NXJ0 267 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 COMMD3Q9UBI1 195 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 POFUT2Q9Y2G5 429 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 LSM2Q9Y333 95 aaKnown RBP2.82□□□□□ -1.96
BRCA1-212ENST00000473961 MMACHCQ9Y4U1 282 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 OR51B2Q9Y5P1 312 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 TMEM14AQ9Y6G1 99 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 GLI3P10071 1580 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 NHSQ6T4R5 1651 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 LTBP1Q14766 1721 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 RGPD3A6NKT7 1758 aaPredicted RBP2.82□□□□□ -1.96
BRCA1-212ENST00000473961 RGPD4Q7Z3J3 1758 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 FOCADQ5VW36 1801 aa2.82□□□□□ -1.96
BRCA1-212ENST00000473961 IGLV4-69A0A075B6H9 119 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 A0A096LNJ9 63 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 IGKV6D-41A0A0C4DH26 115 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 TRDV1A0A1B0GX56 115 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 IRGMA1A4Y4 181 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 SNRPGP15A8MWD9 76 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 C11orf94C9JXX5 98 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 M0QZ92 97 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 GPR31O00270 319 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 SLC16A4O15374 487 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 DLEU1O43261 78 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 CHST10O43529 356 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 GGCTO75223 188 aaKnown RBP2.81□□□□□ -1.96
BRCA1-212ENST00000473961 TRAPPC6AO75865 159 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 SIX6O95475 246 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 IFNA17P01571 189 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 IL5P05113 134 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 CD2P06729 351 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 SLC35G6P0C7Q6 338 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 METTL15P1P0C7V9 234 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 LINC00032P0C843 101 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 C1GALT1C1LP0DN25 315 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 GABRG2P18507 467 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 HTR2CP28335 458 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 AGTR1P30556 359 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 DNASE1L1P49184 302 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 UCNP55089 124 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 MTPNP58546 118 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 SNRPGP62308 76 aaKnown RBP2.81□□□□□ -1.96
BRCA1-212ENST00000473961 EIF5AP63241 154 aaKnown RBP2.81□□□□□ -1.96
BRCA1-212ENST00000473961 PAFAH1B2P68402 229 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 HTR4Q13639 388 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 TPBGQ13641 420 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 HMGN3Q15651 99 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 AKIRIN2Q53H80 203 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 TMEM244Q5VVB8 128 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 ASCL4Q6XD76 172 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 SH2D6Q7Z4S9 175 aa2.81□□□□□ -1.96
BRCA1-212ENST00000473961 MRPL52Q86TS9 123 aaKnown RBP2.81□□□□□ -1.96
BRCA1-212ENST00000473961 LRRC28Q86X40 367 aaPredicted RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms