RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 RBM7Q9Y580 266 aaKnown RBP9.98□□□□□ -0.81
DDX56-209ENST00000473924 FBN1P35555 2871 aaKnown RBP9.98□□□□□ -0.81
DDX56-209ENST00000473924 TMEM89A2RUT3 159 aa9.97□□□□□ -0.81
DDX56-209ENST00000473924 A6NDX4 124 aa9.97□□□□□ -0.81
DDX56-209ENST00000473924 ZNF701M0R085 212 aaPredicted RBP9.97□□□□□ -0.81
DDX56-209ENST00000473924 CTDSP2O14595 271 aa9.97□□□□□ -0.81
DDX56-209ENST00000473924 ITGB1BP1O14713 200 aa9.97□□□□□ -0.81
DDX56-209ENST00000473924 RAB29O14966 203 aa9.97□□□□□ -0.81
DDX56-209ENST00000473924 LANCL1O43813 399 aa9.97□□□□□ -0.81
DDX56-209ENST00000473924 HLA-DQB1P01920 261 aa9.97□□□□□ -0.81
DDX56-209ENST00000473924 SNRNP70P08621 437 aaKnown RBP9.97□□□□□ -0.81
DDX56-209ENST00000473924 CCBE1Q6UXH8 406 aaPredicted RBP9.97□□□□□ -0.81
DDX56-209ENST00000473924 HOGA1Q86XE5 327 aa9.97□□□□□ -0.81
DDX56-209ENST00000473924 MCFD2Q8NI22 146 aa9.97□□□□□ -0.81
DDX56-209ENST00000473924 TAF15Q92804 592 aaKnown RBP eCLIP9.97□□□□□ -0.81
DDX56-209ENST00000473924 ABHD14BQ96IU4 210 aa9.97□□□□□ -0.81
DDX56-209ENST00000473924 AKR1E2Q96JD6 320 aa9.97□□□□□ -0.81
DDX56-209ENST00000473924 DCUN1D5Q9BTE7 237 aa9.97□□□□□ -0.81
DDX56-209ENST00000473924 IFI27L2Q9H2X8 130 aa9.97□□□□□ -0.81
DDX56-209ENST00000473924 C1RLQ9NZP8 487 aa9.97□□□□□ -0.81
DDX56-209ENST00000473924 NDUFA13Q9P0J0 144 aa9.97□□□□□ -0.81
DDX56-209ENST00000473924 RNF150Q9ULK6 438 aa9.97□□□□□ -0.81
DDX56-209ENST00000473924 SAA2-SAA4A0A096LPE2 208 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 IGHV3-72A0A0B4J1Y9 119 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 CHST1O43916 411 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 IGKV1D-33P01593 117 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 IGKV1-33P01594 117 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 OR8U9P0C7N5 309 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 SAA2P0DJI9 122 aaPredicted RBP9.96□□□□□ -0.82
DDX56-209ENST00000473924 GPR12P47775 334 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 OR3A3P47888 321 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 RAG2P55895 527 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 THNSL2Q86YJ6 484 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 LAX1Q8IWV1 398 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 ODF3L1Q8IXM7 274 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 OR8U1Q8NH10 309 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 OR4F5Q8NH21 305 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 CFHR4Q92496 578 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 AGMATQ9BSE5 352 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 NPFFR1Q9GZQ6 430 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 SLIRPQ9GZT3 109 aaKnown RBP9.96□□□□□ -0.82
DDX56-209ENST00000473924 TOLLIPQ9H0E2 274 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 MIXL1Q9H2W2 232 aa9.96□□□□□ -0.82
DDX56-209ENST00000473924 FAM90A9PA6NNJ1 464 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 J3QRK9 145 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 NDUFA7O95182 113 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 TMEM11P17152 192 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 NFYAP23511 347 aaPredicted RBP9.95□□□□□ -0.82
DDX56-209ENST00000473924 CD1BP29016 333 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 RELBQ01201 579 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 HNF4GQ14541 408 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 RPL39P5Q59GN2 51 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 FAM71F2Q6NXP2 309 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 C12orf54Q6X4T0 127 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 ZNF833PQ6ZTB9 187 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 C16orf82Q7Z2V1 217 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 H1FOOQ8IZA3 346 aaPredicted RBP9.95□□□□□ -0.82
DDX56-209ENST00000473924 OR4C13Q8NGP0 309 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 OR2T10Q8NGZ9 312 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 C15orf40Q8WUR7 153 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 DGCR14Q96DF8 476 aaKnown RBP9.95□□□□□ -0.82
DDX56-209ENST00000473924 DIRAS2Q96HU8 199 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 SLC25A33Q9BSK2 321 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 MRPL20Q9BYC9 149 aaKnown RBP9.95□□□□□ -0.82
DDX56-209ENST00000473924 OR2D2Q9H210 308 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 SCPEP1Q9HB40 452 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 BEX1Q9HBH7 125 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 NECAP2Q9NVZ3 263 aa9.95□□□□□ -0.82
DDX56-209ENST00000473924 SULT1C2O00338 296 aa9.94□□□□□ -0.82
DDX56-209ENST00000473924 OR2F2O95006 317 aa9.94□□□□□ -0.82
DDX56-209ENST00000473924 MDKP21741 143 aaPredicted RBP9.94□□□□□ -0.82
DDX56-209ENST00000473924 LUMP51884 338 aaPredicted RBP9.94□□□□□ -0.82
DDX56-209ENST00000473924 LSAMPQ13449 338 aa9.94□□□□□ -0.82
DDX56-209ENST00000473924 HABP2Q14520 560 aaPredicted RBP9.94□□□□□ -0.82
DDX56-209ENST00000473924 AWAT1Q58HT5 328 aa9.94□□□□□ -0.82
DDX56-209ENST00000473924 ARSJQ5FYB0 599 aaPredicted RBP9.94□□□□□ -0.82
DDX56-209ENST00000473924 RNASE12Q5GAN4 147 aaKnown RBP9.94□□□□□ -0.82
DDX56-209ENST00000473924 Q6ZSV7 163 aa9.94□□□□□ -0.82
DDX56-209ENST00000473924 OR5AP2Q8NGF4 316 aa9.94□□□□□ -0.82
DDX56-209ENST00000473924 GPX8Q8TED1 209 aa9.94□□□□□ -0.82
DDX56-209ENST00000473924 SNAPC3Q92966 411 aa9.94□□□□□ -0.82
DDX56-209ENST00000473924 RBM14Q96PK6 669 aaKnown RBP9.94□□□□□ -0.82
DDX56-209ENST00000473924 NABP2Q9BQ15 211 aa9.94□□□□□ -0.82
DDX56-209ENST00000473924 OR2W1Q9Y3N9 320 aa9.94□□□□□ -0.82
DDX56-209ENST00000473924 COL6A5A8TX70 2615 aa9.94□□□□□ -0.82
DDX56-209ENST00000473924 A0A1B0GUS0 222 aa9.93□□□□□ -0.82
DDX56-209ENST00000473924 DPPA5A6NC42 116 aa9.93□□□□□ -0.82
DDX56-209ENST00000473924 ZNF736B4DX44 427 aaPredicted RBP9.93□□□□□ -0.82
DDX56-209ENST00000473924 M0QZK8 103 aa9.93□□□□□ -0.82
DDX56-209ENST00000473924 TSPAN9O75954 239 aa9.93□□□□□ -0.82
DDX56-209ENST00000473924 TPPPO94811 219 aa9.93□□□□□ -0.82
DDX56-209ENST00000473924 MOSP00540 346 aa9.93□□□□□ -0.82
DDX56-209ENST00000473924 OR5H8P0DN80 308 aa9.93□□□□□ -0.82
DDX56-209ENST00000473924 S100A5P33763 92 aa9.93□□□□□ -0.82
DDX56-209ENST00000473924 COMPP49747 757 aaPredicted RBP9.93□□□□□ -0.82
DDX56-209ENST00000473924 TAS2R46P59540 309 aa9.93□□□□□ -0.82
DDX56-209ENST00000473924 IL18Q14116 193 aa9.93□□□□□ -0.82
DDX56-209ENST00000473924 CDK10Q15131 360 aa9.93□□□□□ -0.82
DDX56-209ENST00000473924 FBLN7Q53RD9 439 aa9.93□□□□□ -0.82
DDX56-209ENST00000473924 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms