RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 SVOPQ8N4V2 548 aa9.31□□□□□ -0.92
SMPD4-217ENST00000473720 ZNF491Q8N8L2 437 aa9.31□□□□□ -0.92
SMPD4-217ENST00000473720 RNF152Q8N8N0 203 aa9.31□□□□□ -0.92
SMPD4-217ENST00000473720 OR1N2Q8NGR9 330 aa9.31□□□□□ -0.92
SMPD4-217ENST00000473720 UFD1Q92890 307 aa9.31□□□□□ -0.92
SMPD4-217ENST00000473720 ASCL2Q99929 193 aa9.31□□□□□ -0.92
SMPD4-217ENST00000473720 PARP12Q9H0J9 701 aaKnown RBP9.31□□□□□ -0.92
SMPD4-217ENST00000473720 ALX4Q9H161 411 aaPredicted RBP9.31□□□□□ -0.92
SMPD4-217ENST00000473720 IFI27L2Q9H2X8 130 aa9.31□□□□□ -0.92
SMPD4-217ENST00000473720 AK3Q9UIJ7 227 aa9.31□□□□□ -0.92
SMPD4-217ENST00000473720 LRRC42Q9Y546 428 aa9.31□□□□□ -0.92
SMPD4-217ENST00000473720 RAB29O14966 203 aa9.3□□□□□ -0.92
SMPD4-217ENST00000473720 HLA-DRB1P01911 266 aa9.3□□□□□ -0.92
SMPD4-217ENST00000473720 OR8U8P0C7N1 319 aa9.3□□□□□ -0.92
SMPD4-217ENST00000473720 PPIFP30405 207 aaKnown RBP9.3□□□□□ -0.92
SMPD4-217ENST00000473720 RAB9AP51151 201 aa9.3□□□□□ -0.92
SMPD4-217ENST00000473720 RPS25P62851 125 aaKnown RBP9.3□□□□□ -0.92
SMPD4-217ENST00000473720 ZNF616Q08AN1 781 aa9.3□□□□□ -0.92
SMPD4-217ENST00000473720 C1orf100Q5SVJ3 147 aa9.3□□□□□ -0.92
SMPD4-217ENST00000473720 DRAXINQ8NBI3 349 aaPredicted RBP9.3□□□□□ -0.92
SMPD4-217ENST00000473720 PHYHIPQ92561 330 aa9.3□□□□□ -0.92
SMPD4-217ENST00000473720 WWC2-AS2Q96NR7 200 aa9.3□□□□□ -0.92
SMPD4-217ENST00000473720 TM2D1Q9BX74 207 aa9.3□□□□□ -0.92
SMPD4-217ENST00000473720 CCDC90BQ9GZT6 254 aa9.3□□□□□ -0.92
SMPD4-217ENST00000473720 PIPOXQ9P0Z9 390 aa9.3□□□□□ -0.92
SMPD4-217ENST00000473720 OR1A1Q9P1Q5 309 aa9.3□□□□□ -0.92
SMPD4-217ENST00000473720 NKX1-2Q9UD57 310 aaPredicted RBP9.3□□□□□ -0.92
SMPD4-217ENST00000473720 SCOCQ9UIL1 159 aa9.3□□□□□ -0.92
SMPD4-217ENST00000473720 RNF150Q9ULK6 438 aa9.3□□□□□ -0.92
SMPD4-217ENST00000473720 VSIG4Q9Y279 399 aa9.3□□□□□ -0.92
SMPD4-217ENST00000473720 LSM2Q9Y333 95 aaKnown RBP9.3□□□□□ -0.92
SMPD4-217ENST00000473720 AK6Q9Y3D8 172 aaKnown RBP9.3□□□□□ -0.92
SMPD4-217ENST00000473720 FBXO7Q9Y3I1 522 aa9.3□□□□□ -0.92
SMPD4-217ENST00000473720 TMEM14DPA8MWL7 114 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 I3L521 148 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 SLC22A1O15245 554 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 BPNT1O95861 308 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 UCHL1P09936 223 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 CT45A6P0DMU7 189 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 CT45A5P0DMU8 189 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 CT45A7P0DMV0 189 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 ARSBP15848 533 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 CEACAM6P40199 344 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 VEGFCP49767 419 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 AQP4P55087 323 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 CLDN12P56749 244 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 HLA-DRB3P79483 266 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 NDPQ00604 133 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 NPBQ8NG41 125 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 OR6M1Q8NGM8 313 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 DCUN1D4Q92564 292 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 UBE2E2Q96LR5 201 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 CHCHD6Q9BRQ6 235 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 FAM103A1Q9BTL3 118 aaKnown RBP9.29□□□□□ -0.92
SMPD4-217ENST00000473720 URM1Q9BTM9 101 aaKnown RBP9.29□□□□□ -0.92
SMPD4-217ENST00000473720 LPAR5Q9H1C0 372 aa9.29□□□□□ -0.92
SMPD4-217ENST00000473720 FCN1O00602 326 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 RRHO14718 337 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 SAP30O75446 220 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 NDUFA3O95167 84 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 NAPSAO96009 420 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 SCTP09683 121 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 SNRPBP14678 240 aaKnown RBP9.28□□□□□ -0.92
SMPD4-217ENST00000473720 ZBTB25P24278 435 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 SLURP1P55000 103 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 QRFPP83859 136 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 FHL3Q13643 280 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 KIAA0141Q14154 515 aaPredicted RBP9.28□□□□□ -0.92
SMPD4-217ENST00000473720 RAB11BQ15907 218 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 LY6G6FQ5SQ64 297 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 ASPHD1Q5U4P2 390 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 ZNF880Q6PDB4 577 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 UNQ5815/PRO19632Q6UWF5 114 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 MS4A10Q96PG2 267 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 GFI1Q99684 422 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 GAB2Q9UQC2 676 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 ZNF256Q9Y2P7 627 aaPredicted RBP9.28□□□□□ -0.92
SMPD4-217ENST00000473720 WASHC3Q9Y3C0 194 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 TPRKBQ9Y3C4 175 aa9.28□□□□□ -0.92
SMPD4-217ENST00000473720 OR5H14A6NHG9 310 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 H0YJW9 148 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 SLC17A2O00624 439 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 OVOL1O14753 267 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 SOX15O60248 233 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 IGLV1-40P01703 118 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 IGHV3-11P01762 117 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 CPEP16870 476 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 CALRP27797 417 aaKnown RBP9.27□□□□□ -0.93
SMPD4-217ENST00000473720 LINC00205P59089 165 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 RPS16P62249 146 aaKnown RBP9.27□□□□□ -0.93
SMPD4-217ENST00000473720 CX3CL1P78423 397 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 HES5Q5TA89 166 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 RNLSQ5VYX0 342 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 FAM71F2Q6NXP2 309 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 TMEM91Q6ZNR0 172 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 MOB1BQ7L9L4 216 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 MYOZ3Q8TDC0 251 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 ARHGAP5-AS1Q96IT6 56 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 CMSS1Q9BQ75 279 aaKnown RBP9.27□□□□□ -0.93
SMPD4-217ENST00000473720 PECRQ9BY49 303 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms