RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 UBE2NLQ5JXB2 153 aa14.41□□□□□ -0.1
SNX4-204ENST00000473417 LY6G6FQ5SQ64 297 aa14.41□□□□□ -0.1
SNX4-204ENST00000473417 OR8H3Q8N146 312 aa14.41□□□□□ -0.1
SNX4-204ENST00000473417 OR4A4PQ8NGN8 299 aa14.41□□□□□ -0.1
SNX4-204ENST00000473417 WIPF2Q8TF74 440 aaPredicted RBP14.41□□□□□ -0.1
SNX4-204ENST00000473417 S100A16Q96FQ6 103 aaKnown RBP14.41□□□□□ -0.1
SNX4-204ENST00000473417 ST6GALNAC5Q9BVH7 336 aa14.41□□□□□ -0.1
SNX4-204ENST00000473417 PRSS22Q9GZN4 317 aa14.41□□□□□ -0.1
SNX4-204ENST00000473417 IGKV1D-8A0A087WSZ0 117 aa14.4□□□□□ -0.1
SNX4-204ENST00000473417 IGHV3-72A0A0B4J1Y9 119 aa14.4□□□□□ -0.1
SNX4-204ENST00000473417 BET1O15155 118 aa14.4□□□□□ -0.1
SNX4-204ENST00000473417 SSX5O60225 188 aa14.4□□□□□ -0.1
SNX4-204ENST00000473417 FBXO24O75426 580 aa14.4□□□□□ -0.1
SNX4-204ENST00000473417 SNRNP70P08621 437 aaKnown RBP14.4□□□□□ -0.1
SNX4-204ENST00000473417 FAM106CPP0CH98 169 aa14.4□□□□□ -0.1
SNX4-204ENST00000473417 PTHLHP12272 177 aa14.4□□□□□ -0.1
SNX4-204ENST00000473417 DTYMKP23919 212 aa14.4□□□□□ -0.1
SNX4-204ENST00000473417 PITPNAQ00169 270 aa14.4□□□□□ -0.1
SNX4-204ENST00000473417 SPCS2Q15005 226 aa14.4□□□□□ -0.1
SNX4-204ENST00000473417 IGSF11Q5DX21 431 aa14.4□□□□□ -0.1
SNX4-204ENST00000473417 C1QL4Q86Z23 238 aa14.4□□□□□ -0.1
SNX4-204ENST00000473417 ODF3L1Q8IXM7 274 aa14.4□□□□□ -0.1
SNX4-204ENST00000473417 RTN4IP1Q8WWV3 396 aaPredicted RBP14.4□□□□□ -0.1
SNX4-204ENST00000473417 WNT10AQ9GZT5 417 aa14.4□□□□□ -0.1
SNX4-204ENST00000473417 FAM90A9PA6NNJ1 464 aa14.39□□□□□ -0.11
SNX4-204ENST00000473417 OPN1MWP04001 364 aa14.39□□□□□ -0.11
SNX4-204ENST00000473417 OPN1MW2P0DN77 364 aa14.39□□□□□ -0.11
SNX4-204ENST00000473417 OPN1MW3P0DN78 364 aa14.39□□□□□ -0.11
SNX4-204ENST00000473417 ZNF137PP52743 207 aa14.39□□□□□ -0.11
SNX4-204ENST00000473417 TMBIM6P55061 237 aa14.39□□□□□ -0.11
SNX4-204ENST00000473417 HES1Q14469 280 aa14.39□□□□□ -0.11
SNX4-204ENST00000473417 HNF4GQ14541 408 aa14.39□□□□□ -0.11
SNX4-204ENST00000473417 SRSF7Q16629 238 aaKnown RBP eCLIP14.39□□□□□ -0.11
SNX4-204ENST00000473417 Q6ZS46 218 aa14.39□□□□□ -0.11
SNX4-204ENST00000473417 TGIF2LXQ8IUE1 241 aa14.39□□□□□ -0.11
SNX4-204ENST00000473417 RAB2BQ8WUD1 216 aa14.39□□□□□ -0.11
SNX4-204ENST00000473417 ACOT12Q8WYK0 555 aa14.39□□□□□ -0.11
SNX4-204ENST00000473417 SLC25A33Q9BSK2 321 aa14.39□□□□□ -0.11
SNX4-204ENST00000473417 C11orf54Q9H0W9 315 aaPredicted RBP14.39□□□□□ -0.11
SNX4-204ENST00000473417 IFI27L2Q9H2X8 130 aa14.39□□□□□ -0.11
SNX4-204ENST00000473417 AUNIPQ9H7T9 357 aa14.39□□□□□ -0.11
SNX4-204ENST00000473417 RDH8Q9NYR8 311 aa14.39□□□□□ -0.11
SNX4-204ENST00000473417 XRCC3O43542 346 aa14.38□□□□□ -0.11
SNX4-204ENST00000473417 IGKV1D-33P01593 117 aa14.38□□□□□ -0.11
SNX4-204ENST00000473417 IGKV1-33P01594 117 aa14.38□□□□□ -0.11
SNX4-204ENST00000473417 EIF4EP06730 217 aaKnown RBP14.38□□□□□ -0.11
SNX4-204ENST00000473417 LPLP06858 475 aa14.38□□□□□ -0.11
SNX4-204ENST00000473417 ZNF182P17025 639 aaPredicted RBP14.38□□□□□ -0.11
SNX4-204ENST00000473417 OR3A3P47888 321 aa14.38□□□□□ -0.11
SNX4-204ENST00000473417 BLCAPP62952 87 aa14.38□□□□□ -0.11
SNX4-204ENST00000473417 THNSL2Q86YJ6 484 aa14.38□□□□□ -0.11
SNX4-204ENST00000473417 ABHD14BQ96IU4 210 aa14.38□□□□□ -0.11
SNX4-204ENST00000473417 CABLES2Q9BTV7 478 aa14.38□□□□□ -0.11
SNX4-204ENST00000473417 RNF150Q9ULK6 438 aa14.38□□□□□ -0.11
SNX4-204ENST00000473417 SAA2-SAA4A0A096LPE2 208 aa14.37□□□□□ -0.11
SNX4-204ENST00000473417 ZNF736B4DX44 427 aaPredicted RBP14.37□□□□□ -0.11
SNX4-204ENST00000473417 TXNL1O43396 289 aa14.37□□□□□ -0.11
SNX4-204ENST00000473417 LANCL1O43813 399 aa14.37□□□□□ -0.11
SNX4-204ENST00000473417 HPGDSO60760 199 aa14.37□□□□□ -0.11
SNX4-204ENST00000473417 NOL3O60936 208 aaKnown RBP14.37□□□□□ -0.11
SNX4-204ENST00000473417 OR2F2O95006 317 aa14.37□□□□□ -0.11
SNX4-204ENST00000473417 SAA2P0DJI9 122 aaPredicted RBP14.37□□□□□ -0.11
SNX4-204ENST00000473417 CD28P10747 220 aa14.37□□□□□ -0.11
SNX4-204ENST00000473417 TMEM95Q3KNT9 176 aa14.37□□□□□ -0.11
SNX4-204ENST00000473417 TMEM69Q5SWH9 247 aa14.37□□□□□ -0.11
SNX4-204ENST00000473417 MZT2AQ6P582 158 aa14.37□□□□□ -0.11
SNX4-204ENST00000473417 Q6ZS49 121 aa14.37□□□□□ -0.11
SNX4-204ENST00000473417 C16orf82Q7Z2V1 217 aa14.37□□□□□ -0.11
SNX4-204ENST00000473417 OR10J5Q8NHC4 309 aa14.37□□□□□ -0.11
SNX4-204ENST00000473417 EDARADDQ8WWZ3 215 aa14.37□□□□□ -0.11
SNX4-204ENST00000473417 AP3S1Q92572 193 aa14.37□□□□□ -0.11
SNX4-204ENST00000473417 RBMXL1Q96E39 390 aaKnown RBP14.37□□□□□ -0.11
SNX4-204ENST00000473417 RBM14Q96PK6 669 aaKnown RBP14.37□□□□□ -0.11
SNX4-204ENST00000473417 TRBV6-7A0A0A0MS04 114 aa14.36□□□□□ -0.11
SNX4-204ENST00000473417 G3V4G9 280 aa14.36□□□□□ -0.11
SNX4-204ENST00000473417 ITGB1BP1O14713 200 aa14.36□□□□□ -0.11
SNX4-204ENST00000473417 RAB29O14966 203 aa14.36□□□□□ -0.11
SNX4-204ENST00000473417 FCER2P06734 321 aa14.36□□□□□ -0.11
SNX4-204ENST00000473417 TMEM11P17152 192 aa14.36□□□□□ -0.11
SNX4-204ENST00000473417 VDAC2P45880 294 aaPredicted RBP14.36□□□□□ -0.11
SNX4-204ENST00000473417 TAS2R20P59543 309 aa14.36□□□□□ -0.11
SNX4-204ENST00000473417 RPL39P5Q59GN2 51 aa14.36□□□□□ -0.11
SNX4-204ENST00000473417 ARSJQ5FYB0 599 aaPredicted RBP14.36□□□□□ -0.11
SNX4-204ENST00000473417 ZNF833PQ6ZTB9 187 aa14.36□□□□□ -0.11
SNX4-204ENST00000473417 NDUFA11Q86Y39 141 aa14.36□□□□□ -0.11
SNX4-204ENST00000473417 AKR1E2Q96JD6 320 aa14.36□□□□□ -0.11
SNX4-204ENST00000473417 CMTM3Q96MX0 182 aa14.36□□□□□ -0.11
SNX4-204ENST00000473417 BCL7BQ9BQE9 202 aa14.36□□□□□ -0.11
SNX4-204ENST00000473417 GINS4Q9BRT9 223 aa14.36□□□□□ -0.11
SNX4-204ENST00000473417 AGMATQ9BSE5 352 aa14.36□□□□□ -0.11
SNX4-204ENST00000473417 MRPL20Q9BYC9 149 aaKnown RBP14.36□□□□□ -0.11
SNX4-204ENST00000473417 PIPOXQ9P0Z9 390 aa14.36□□□□□ -0.11
SNX4-204ENST00000473417 ADARB2-AS1A8MUL3 147 aa14.35□□□□□ -0.11
SNX4-204ENST00000473417 APOA1P02647 267 aa14.35□□□□□ -0.11
SNX4-204ENST00000473417 ELK1P19419 428 aa14.35□□□□□ -0.11
SNX4-204ENST00000473417 BEAN1Q3B7T3 259 aa14.35□□□□□ -0.11
SNX4-204ENST00000473417 NSUN5P1Q3KNT7 163 aa14.35□□□□□ -0.11
SNX4-204ENST00000473417 SAMD5Q5TGI4 173 aa14.35□□□□□ -0.11
SNX4-204ENST00000473417 GVQW1Q8N7I0 195 aa14.35□□□□□ -0.11
SNX4-204ENST00000473417 ISOC1Q96CN7 298 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms