RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 PRR25Q96S07 402 aa10.5□□□□□ -0.73
CHD3-209ENST00000473376 SULT4A1Q9BR01 284 aa10.5□□□□□ -0.73
CHD3-209ENST00000473376 AGMATQ9BSE5 352 aa10.5□□□□□ -0.73
CHD3-209ENST00000473376 TMEM59Q9BXS4 323 aa10.5□□□□□ -0.73
CHD3-209ENST00000473376 TOLLIPQ9H0E2 274 aa10.5□□□□□ -0.73
CHD3-209ENST00000473376 SLA2Q9H6Q3 261 aa10.5□□□□□ -0.73
CHD3-209ENST00000473376 GNB4Q9HAV0 340 aa10.5□□□□□ -0.73
CHD3-209ENST00000473376 PARP11Q9NR21 331 aa10.5□□□□□ -0.73
CHD3-209ENST00000473376 FOXA2Q9Y261 457 aaPredicted RBP10.5□□□□□ -0.73
CHD3-209ENST00000473376 WSB1Q9Y6I7 421 aa10.5□□□□□ -0.73
CHD3-209ENST00000473376 DNAH9Q9NYC9 4486 aa10.5□□□□□ -0.73
CHD3-209ENST00000473376 TMEM14DPA8MWL7 114 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 SLC22A1O15245 554 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 SPDEFO95238 335 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 BRI3O95415 125 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 SRMP19623 302 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 ZBTB25P24278 435 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 CD40LGP29965 261 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 BLVRBP30043 206 aaPredicted RBP10.49□□□□□ -0.73
CHD3-209ENST00000473376 CX3CL1P78423 397 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 QRFPP83859 136 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 ACSM3Q53FZ2 586 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 LAIR2Q6ISS4 152 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 LRRTM1Q86UE6 522 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 FAM89BQ8N5H3 189 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 OR6M1Q8NGM8 313 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 FAM46BQ96A09 425 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 FLYWCH2Q96CP2 140 aaKnown RBP10.49□□□□□ -0.73
CHD3-209ENST00000473376 RITA1Q96K30 269 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 MND1Q9BWT6 205 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 TPSG1Q9NRR2 321 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 HSF4Q9ULV5 492 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 STAB2Q8WWQ8 2551 aa10.49□□□□□ -0.73
CHD3-209ENST00000473376 LINC01619G3V211 115 aa10.48□□□□□ -0.73
CHD3-209ENST00000473376 CASQ2O14958 399 aaPredicted RBP10.48□□□□□ -0.73
CHD3-209ENST00000473376 LGALS1P09382 135 aaKnown RBP10.48□□□□□ -0.73
CHD3-209ENST00000473376 OR8U9P0C7N5 309 aa10.48□□□□□ -0.73
CHD3-209ENST00000473376 CT45A6P0DMU7 189 aa10.48□□□□□ -0.73
CHD3-209ENST00000473376 CT45A5P0DMU8 189 aa10.48□□□□□ -0.73
CHD3-209ENST00000473376 CT45A7P0DMV0 189 aa10.48□□□□□ -0.73
CHD3-209ENST00000473376 HTR2CP28335 458 aa10.48□□□□□ -0.73
CHD3-209ENST00000473376 OR3A3P47888 321 aa10.48□□□□□ -0.73
CHD3-209ENST00000473376 GNB1P62873 340 aa10.48□□□□□ -0.73
CHD3-209ENST00000473376 ACSM6Q6P461 480 aa10.48□□□□□ -0.73
CHD3-209ENST00000473376 AHSA2Q719I0 299 aa10.48□□□□□ -0.73
CHD3-209ENST00000473376 OR6Q1Q8NGQ2 317 aa10.48□□□□□ -0.73
CHD3-209ENST00000473376 DCUN1D4Q92564 292 aa10.48□□□□□ -0.73
CHD3-209ENST00000473376 URM1Q9BTM9 101 aaKnown RBP10.48□□□□□ -0.73
CHD3-209ENST00000473376 FAAP24Q9BTP7 215 aa10.48□□□□□ -0.73
CHD3-209ENST00000473376 PLEKHJ1Q9NW61 149 aa10.48□□□□□ -0.73
CHD3-209ENST00000473376 WASHC3Q9Y3C0 194 aa10.48□□□□□ -0.73
CHD3-209ENST00000473376 PNMA8CA0A1B0GUJ8 204 aa10.47□□□□□ -0.73
CHD3-209ENST00000473376 H0YJW9 148 aa10.47□□□□□ -0.73
CHD3-209ENST00000473376 H3BUA1 57 aa10.47□□□□□ -0.73
CHD3-209ENST00000473376 DIRAS3O95661 229 aa10.47□□□□□ -0.73
CHD3-209ENST00000473376 HSPB1P04792 205 aaKnown RBP10.47□□□□□ -0.73
CHD3-209ENST00000473376 TFAP2AP05549 437 aa10.47□□□□□ -0.73
CHD3-209ENST00000473376 GSTP1P09211 210 aaKnown RBP10.47□□□□□ -0.73
CHD3-209ENST00000473376 UCHL1P09936 223 aa10.47□□□□□ -0.73
CHD3-209ENST00000473376 CNTFRP26992 372 aa10.47□□□□□ -0.73
CHD3-209ENST00000473376 SPHARQ15513 63 aa10.47□□□□□ -0.73
CHD3-209ENST00000473376 TRAM1Q15629 374 aa10.47□□□□□ -0.73
CHD3-209ENST00000473376 MOGAT2Q3SYC2 334 aa10.47□□□□□ -0.73
CHD3-209ENST00000473376 C6orf201Q7Z4U5 140 aa10.47□□□□□ -0.73
CHD3-209ENST00000473376 IL1F10Q8WWZ1 152 aa10.47□□□□□ -0.73
CHD3-209ENST00000473376 TMEM68Q96MH6 324 aa10.47□□□□□ -0.73
CHD3-209ENST00000473376 TSNAXQ99598 290 aaKnown RBP10.47□□□□□ -0.73
CHD3-209ENST00000473376 CENPOQ9BU64 300 aa10.47□□□□□ -0.73
CHD3-209ENST00000473376 ISYNA1Q9NPH2 558 aa10.47□□□□□ -0.73
CHD3-209ENST00000473376 GAB2Q9UQC2 676 aa10.47□□□□□ -0.73
CHD3-209ENST00000473376 SORL1Q92673 2214 aa10.46□□□□□ -0.73
CHD3-209ENST00000473376 A0A1W2PN81 502 aa10.46□□□□□ -0.73
CHD3-209ENST00000473376 A8MZ25 164 aa10.46□□□□□ -0.73
CHD3-209ENST00000473376 SOX15O60248 233 aa10.46□□□□□ -0.73
CHD3-209ENST00000473376 CDK1P06493 297 aa10.46□□□□□ -0.73
CHD3-209ENST00000473376 GNAO1P09471 354 aa10.46□□□□□ -0.73
CHD3-209ENST00000473376 EGR2P11161 476 aaPredicted RBP10.46□□□□□ -0.73
CHD3-209ENST00000473376 PSMA1P25786 263 aaKnown RBP10.46□□□□□ -0.73
CHD3-209ENST00000473376 CHRNA7P36544 502 aa10.46□□□□□ -0.73
CHD3-209ENST00000473376 SERPINB10P48595 397 aa10.46□□□□□ -0.73
CHD3-209ENST00000473376 TAGLNQ01995 201 aaKnown RBP10.46□□□□□ -0.73
CHD3-209ENST00000473376 GABPB1Q06547 395 aaPredicted RBP10.46□□□□□ -0.73
CHD3-209ENST00000473376 UNC119Q13432 240 aa10.46□□□□□ -0.73
CHD3-209ENST00000473376 HSD17B12Q53GQ0 312 aa10.46□□□□□ -0.73
CHD3-209ENST00000473376 ACTBL2Q562R1 376 aa10.46□□□□□ -0.73
CHD3-209ENST00000473376 OGFRL1Q5TC84 451 aaPredicted RBP10.46□□□□□ -0.73
CHD3-209ENST00000473376 FAM131AQ6UXB0 335 aa10.46□□□□□ -0.73
CHD3-209ENST00000473376 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.46□□□□□ -0.73
CHD3-209ENST00000473376 BPIFB6Q8NFQ5 453 aa10.46□□□□□ -0.73
CHD3-209ENST00000473376 DLX4Q92988 240 aaPredicted RBP10.46□□□□□ -0.73
CHD3-209ENST00000473376 RHOVQ96L33 236 aa10.46□□□□□ -0.73
CHD3-209ENST00000473376 VCXQ9H320 206 aa10.46□□□□□ -0.73
CHD3-209ENST00000473376 ST8SIA5O15466 376 aa10.45□□□□□ -0.74
CHD3-209ENST00000473376 SAP30O75446 220 aa10.45□□□□□ -0.74
CHD3-209ENST00000473376 GP9P14770 177 aa10.45□□□□□ -0.74
CHD3-209ENST00000473376 PSMD7P51665 324 aa10.45□□□□□ -0.74
CHD3-209ENST00000473376 NDPQ00604 133 aa10.45□□□□□ -0.74
CHD3-209ENST00000473376 PLGLAQ15195 96 aa10.45□□□□□ -0.74
CHD3-209ENST00000473376 RBM48Q5RL73 367 aaKnown RBP10.45□□□□□ -0.74
CHD3-209ENST00000473376 PPP1R27Q86WC6 154 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms