RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 SLX4Q8IY92 1834 aa1.65□□□□□ -2.15
CLK1-209ENST00000472679 NUP153P49790 1475 aaKnown RBP1.64□□□□□ -2.15
CLK1-209ENST00000472679 CHD2O14647 1828 aaKnown RBP1.64□□□□□ -2.15
CLK1-209ENST00000472679 MDFIC2A0A1B0GVS7 189 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 ARRDC5A6NEK1 342 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 ZNF879B4DU55 563 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 F5H5K5 113 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 UBFD1O14562 309 aaKnown RBP1.64□□□□□ -2.15
CLK1-209ENST00000472679 GNRH2O43555 120 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 SYNGR1O43759 233 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 STK16O75716 305 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 CCL3P10147 92 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 CRYBB3P26998 211 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 SERPINB10P48595 397 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 HINT1P49773 126 aaPredicted RBP1.64□□□□□ -2.15
CLK1-209ENST00000472679 DLX6P56179 175 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 SYCP1Q15431 976 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 MESTQ5EB52 335 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 N4BP2L1Q5TBK1 243 aaPredicted RBP1.64□□□□□ -2.15
CLK1-209ENST00000472679 GLT6D1Q7Z4J2 308 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 ZNF283Q8N7M2 679 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 SPACA4Q8TDM5 124 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 FGF13Q92913 245 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 PPWD1Q96BP3 646 aaKnown RBP1.64□□□□□ -2.15
CLK1-209ENST00000472679 ACY3Q96HD9 319 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 ASCL3Q9NQ33 180 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 NDUFB11Q9NX14 153 aa1.64□□□□□ -2.15
CLK1-209ENST00000472679 RP1L1Q8IWN7 2480 aaPredicted RBP1.64□□□□□ -2.15
CLK1-209ENST00000472679 DENND4BO75064 1496 aaPredicted RBP1.63□□□□□ -2.15
CLK1-209ENST00000472679 FN1P02751 2386 aaKnown RBP1.63□□□□□ -2.15
CLK1-209ENST00000472679 IGLV3-27P01718 113 aa1.63□□□□□ -2.15
CLK1-209ENST00000472679 NPPCP23582 126 aa1.63□□□□□ -2.15
CLK1-209ENST00000472679 HADHBP55084 474 aaKnown RBP1.63□□□□□ -2.15
CLK1-209ENST00000472679 SPATA31B1PQ5VZV4 182 aa1.63□□□□□ -2.15
CLK1-209ENST00000472679 SELENOHQ8IZQ5 122 aaKnown RBP1.63□□□□□ -2.15
CLK1-209ENST00000472679 CCDC112Q8NEF3 446 aa1.63□□□□□ -2.15
CLK1-209ENST00000472679 OR51H1Q8NH63 302 aa1.63□□□□□ -2.15
CLK1-209ENST00000472679 ZNF563Q8TA94 476 aa1.63□□□□□ -2.15
CLK1-209ENST00000472679 MRPS24Q96EL2 167 aaKnown RBP1.63□□□□□ -2.15
CLK1-209ENST00000472679 TIMM21Q9BVV7 248 aa1.63□□□□□ -2.15
CLK1-209ENST00000472679 HHLA2Q9UM44 414 aa1.63□□□□□ -2.15
CLK1-209ENST00000472679 NYNRINQ9P2P1 1898 aaKnown RBP1.63□□□□□ -2.15
CLK1-209ENST00000472679 MED13Q9UHV7 2174 aa1.62□□□□□ -2.15
CLK1-209ENST00000472679 IGHV3-15A0A0B4J1V0 119 aa1.62□□□□□ -2.15
CLK1-209ENST00000472679 A0A1B0GVG6 124 aa1.62□□□□□ -2.15
CLK1-209ENST00000472679 J3QQQ9 107 aa1.62□□□□□ -2.15
CLK1-209ENST00000472679 CD7P09564 240 aa1.62□□□□□ -2.15
CLK1-209ENST00000472679 ATP6V0CP27449 155 aa1.62□□□□□ -2.15
CLK1-209ENST00000472679 HSPA9P38646 679 aaKnown RBP1.62□□□□□ -2.15
CLK1-209ENST00000472679 STC1P52823 247 aa1.62□□□□□ -2.15
CLK1-209ENST00000472679 RPL26P61254 145 aaKnown RBP1.62□□□□□ -2.15
CLK1-209ENST00000472679 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.62□□□□□ -2.15
CLK1-209ENST00000472679 GNB1LQ9BYB4 327 aa1.62□□□□□ -2.15
CLK1-209ENST00000472679 RPL26L1Q9UNX3 145 aaKnown RBP1.62□□□□□ -2.15
CLK1-209ENST00000472679 SNX10Q9Y5X0 201 aa1.62□□□□□ -2.15
CLK1-209ENST00000472679 DSCAMO60469 2012 aa1.62□□□□□ -2.15
CLK1-209ENST00000472679 OR5K4A6NMS3 321 aa1.61□□□□□ -2.15
CLK1-209ENST00000472679 LIN7AO14910 233 aaPredicted RBP1.61□□□□□ -2.15
CLK1-209ENST00000472679 ARL6IP5O75915 188 aa1.61□□□□□ -2.15
CLK1-209ENST00000472679 AGTR1P30556 359 aa1.61□□□□□ -2.15
CLK1-209ENST00000472679 TMEM31Q5JXX7 168 aa1.61□□□□□ -2.15
CLK1-209ENST00000472679 SLC13A5Q86YT5 568 aaPredicted RBP1.61□□□□□ -2.15
CLK1-209ENST00000472679 UBQLN4Q9NRR5 601 aa1.61□□□□□ -2.15
CLK1-209ENST00000472679 GLS2Q9UI32 602 aa1.61□□□□□ -2.15
CLK1-209ENST00000472679 MAP3K19Q56UN5 1328 aa1.61□□□□□ -2.15
CLK1-209ENST00000472679 IGKV2-29A2NJV5 120 aaPredicted RBP1.6□□□□□ -2.15
CLK1-209ENST00000472679 GRIFINA4D1Z8 144 aa1.6□□□□□ -2.15
CLK1-209ENST00000472679 TMEM235A6NFC5 223 aa1.6□□□□□ -2.15
CLK1-209ENST00000472679 GPX1P07203 203 aa1.6□□□□□ -2.15
CLK1-209ENST00000472679 RD3LP0DJH9 198 aa1.6□□□□□ -2.15
CLK1-209ENST00000472679 PVALBP20472 110 aaPredicted RBP1.6□□□□□ -2.15
CLK1-209ENST00000472679 EXOC3L4Q17RC7 722 aa1.6□□□□□ -2.15
CLK1-209ENST00000472679 C17orf78Q8N4C9 275 aa1.6□□□□□ -2.15
CLK1-209ENST00000472679 KDM5BQ9UGL1 1544 aa1.6□□□□□ -2.15
CLK1-209ENST00000472679 LAMB2P55268 1798 aa1.59□□□□□ -2.15
CLK1-209ENST00000472679 SCN9AQ15858 1988 aa1.59□□□□□ -2.15
CLK1-209ENST00000472679 OR11H12B2RN74 326 aa1.59□□□□□ -2.15
CLK1-209ENST00000472679 SLC17A3O00476 420 aa1.59□□□□□ -2.15
CLK1-209ENST00000472679 ZNF728P0DKX0 622 aa1.59□□□□□ -2.15
CLK1-209ENST00000472679 KDELR2P33947 212 aa1.59□□□□□ -2.15
CLK1-209ENST00000472679 RPL14P50914 215 aaKnown RBP1.59□□□□□ -2.15
CLK1-209ENST00000472679 TBC1D28Q2M2D7 210 aa1.59□□□□□ -2.15
CLK1-209ENST00000472679 SCGB1D4Q6XE38 83 aa1.59□□□□□ -2.15
CLK1-209ENST00000472679 BLIDQ8IZY5 108 aa1.59□□□□□ -2.15
CLK1-209ENST00000472679 OR11H2Q8NH07 326 aa1.59□□□□□ -2.15
CLK1-209ENST00000472679 TMEM208Q9BTX3 173 aa1.59□□□□□ -2.15
CLK1-209ENST00000472679 OR51B6Q9H340 312 aa1.59□□□□□ -2.15
CLK1-209ENST00000472679 TREM1Q9NP99 234 aa1.59□□□□□ -2.15
CLK1-209ENST00000472679 MKRN2OSH3BPM6 223 aa1.58□□□□□ -2.16
CLK1-209ENST00000472679 K7ERQ8 282 aa1.58□□□□□ -2.16
CLK1-209ENST00000472679 MRASO14807 208 aa1.58□□□□□ -2.16
CLK1-209ENST00000472679 ADAP1O75689 374 aa1.58□□□□□ -2.16
CLK1-209ENST00000472679 HBZP02008 142 aa1.58□□□□□ -2.16
CLK1-209ENST00000472679 HERVK_113P63121 156 aa1.58□□□□□ -2.16
CLK1-209ENST00000472679 XRCC4Q13426 336 aa1.58□□□□□ -2.16
CLK1-209ENST00000472679 UAP1Q16222 522 aaPredicted RBP1.58□□□□□ -2.16
CLK1-209ENST00000472679 Q6ZTI0 123 aa1.58□□□□□ -2.16
CLK1-209ENST00000472679 ATP5L2Q7Z4Y8 100 aa1.58□□□□□ -2.16
CLK1-209ENST00000472679 BOD1L2Q8IYS8 172 aa1.58□□□□□ -2.16
CLK1-209ENST00000472679 DEFB119Q8N690 84 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms