RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 TRBV12-3P01733 135 aa14.31□□□□□ -0.12
SORT1-203ENST00000471996 CT45A6P0DMU7 189 aa14.31□□□□□ -0.12
SORT1-203ENST00000471996 CT45A5P0DMU8 189 aa14.31□□□□□ -0.12
SORT1-203ENST00000471996 CT45A7P0DMV0 189 aa14.31□□□□□ -0.12
SORT1-203ENST00000471996 SNRPBP14678 240 aaKnown RBP14.31□□□□□ -0.12
SORT1-203ENST00000471996 HTD2P86397 168 aa14.31□□□□□ -0.12
SORT1-203ENST00000471996 RPEL1Q2QD12 228 aa14.31□□□□□ -0.12
SORT1-203ENST00000471996 SLC22A6Q4U2R8 563 aa14.31□□□□□ -0.12
SORT1-203ENST00000471996 RAB12Q6IQ22 244 aa14.31□□□□□ -0.12
SORT1-203ENST00000471996 ZNF343Q6P1L6 599 aa14.31□□□□□ -0.12
SORT1-203ENST00000471996 C5orf24Q7Z6I8 188 aa14.31□□□□□ -0.12
SORT1-203ENST00000471996 OR5T1Q8NG75 326 aa14.31□□□□□ -0.12
SORT1-203ENST00000471996 CIB1Q99828 191 aa14.31□□□□□ -0.12
SORT1-203ENST00000471996 IFI27L2Q9H2X8 130 aa14.31□□□□□ -0.12
SORT1-203ENST00000471996 KCNIP1Q9NZI2 227 aa14.31□□□□□ -0.12
SORT1-203ENST00000471996 PEMTQ9UBM1 199 aa14.31□□□□□ -0.12
SORT1-203ENST00000471996 METTL1Q9UBP6 276 aaKnown RBP14.31□□□□□ -0.12
SORT1-203ENST00000471996 SLC22A1O15245 554 aa14.3□□□□□ -0.12
SORT1-203ENST00000471996 CA11O75493 328 aa14.3□□□□□ -0.12
SORT1-203ENST00000471996 RBBP9O75884 186 aa14.3□□□□□ -0.12
SORT1-203ENST00000471996 AADACP22760 399 aa14.3□□□□□ -0.12
SORT1-203ENST00000471996 MC5RP33032 325 aa14.3□□□□□ -0.12
SORT1-203ENST00000471996 SOX2P48431 317 aa14.3□□□□□ -0.12
SORT1-203ENST00000471996 EWSR1Q01844 656 aaKnown RBP eCLIP14.3□□□□□ -0.12
SORT1-203ENST00000471996 FLOT2Q14254 428 aa14.3□□□□□ -0.12
SORT1-203ENST00000471996 DDI2Q5TDH0 399 aa14.3□□□□□ -0.12
SORT1-203ENST00000471996 LGALS9CQ6DKI2 356 aa14.3□□□□□ -0.12
SORT1-203ENST00000471996 ZNF554Q86TJ5 538 aa14.3□□□□□ -0.12
SORT1-203ENST00000471996 OR2AK2Q8NG84 335 aa14.3□□□□□ -0.12
SORT1-203ENST00000471996 MRPL48Q96GC5 212 aaKnown RBP14.3□□□□□ -0.12
SORT1-203ENST00000471996 RNF5Q99942 180 aa14.3□□□□□ -0.12
SORT1-203ENST00000471996 GABARAPL1Q9H0R8 117 aa14.3□□□□□ -0.12
SORT1-203ENST00000471996 ISG20L2Q9H9L3 353 aaKnown RBP14.3□□□□□ -0.12
SORT1-203ENST00000471996 TMEM138Q9NPI0 162 aa14.3□□□□□ -0.12
SORT1-203ENST00000471996 H0YJW9 148 aa14.29□□□□□ -0.12
SORT1-203ENST00000471996 AIREO43918 545 aa14.29□□□□□ -0.12
SORT1-203ENST00000471996 SC5DO75845 299 aa14.29□□□□□ -0.12
SORT1-203ENST00000471996 MAS1P04201 325 aa14.29□□□□□ -0.12
SORT1-203ENST00000471996 FXYD3Q14802 87 aa14.29□□□□□ -0.12
SORT1-203ENST00000471996 PSG5Q15238 335 aa14.29□□□□□ -0.12
SORT1-203ENST00000471996 GLDNQ6ZMI3 551 aaPredicted RBP14.29□□□□□ -0.12
SORT1-203ENST00000471996 SYS1Q8N2H4 156 aa14.29□□□□□ -0.12
SORT1-203ENST00000471996 GRPEL2Q8TAA5 225 aa14.29□□□□□ -0.12
SORT1-203ENST00000471996 GHSRQ92847 366 aa14.29□□□□□ -0.12
SORT1-203ENST00000471996 KCTD12Q96CX2 325 aaKnown RBP14.29□□□□□ -0.12
SORT1-203ENST00000471996 ALG8Q9BVK2 526 aa14.29□□□□□ -0.12
SORT1-203ENST00000471996 PIPOXQ9P0Z9 390 aa14.29□□□□□ -0.12
SORT1-203ENST00000471996 WASHC3Q9Y3C0 194 aa14.29□□□□□ -0.12
SORT1-203ENST00000471996 PEX16Q9Y5Y5 336 aa14.29□□□□□ -0.12
SORT1-203ENST00000471996 DNAH6Q9C0G6 4158 aa14.28□□□□□ -0.12
SORT1-203ENST00000471996 A0A0J9YWU9 116 aa14.28□□□□□ -0.12
SORT1-203ENST00000471996 E9PI62 339 aa14.28□□□□□ -0.12
SORT1-203ENST00000471996 H7C2Y5 167 aa14.28□□□□□ -0.12
SORT1-203ENST00000471996 RASSF2P50749 326 aa14.28□□□□□ -0.12
SORT1-203ENST00000471996 LHFPL3Q86UP9 236 aa14.28□□□□□ -0.12
SORT1-203ENST00000471996 ZDHHC13Q8IUH4 622 aa14.28□□□□□ -0.12
SORT1-203ENST00000471996 BVESQ8NE79 360 aa14.28□□□□□ -0.12
SORT1-203ENST00000471996 SLC7A6OSQ96CW6 309 aaPredicted RBP14.28□□□□□ -0.12
SORT1-203ENST00000471996 MYCBPQ99417 103 aaPredicted RBP14.28□□□□□ -0.12
SORT1-203ENST00000471996 GABARAPL3Q9BY60 117 aa14.28□□□□□ -0.12
SORT1-203ENST00000471996 EXOGQ9Y2C4 368 aaKnown RBP14.28□□□□□ -0.12
SORT1-203ENST00000471996 ATP5HO75947 161 aa14.27□□□□□ -0.13
SORT1-203ENST00000471996 CD2P06729 351 aa14.27□□□□□ -0.13
SORT1-203ENST00000471996 DEFA5Q01523 94 aa14.27□□□□□ -0.13
SORT1-203ENST00000471996 TNFRSF9Q07011 255 aa14.27□□□□□ -0.13
SORT1-203ENST00000471996 MRPL28Q13084 256 aaKnown RBP14.27□□□□□ -0.13
SORT1-203ENST00000471996 GPR176Q14439 515 aa14.27□□□□□ -0.13
SORT1-203ENST00000471996 RPL39P5Q59GN2 51 aa14.27□□□□□ -0.13
SORT1-203ENST00000471996 DMKNQ6E0U4 476 aaPredicted RBP14.27□□□□□ -0.13
SORT1-203ENST00000471996 OR5AN1Q8NGI8 311 aa14.27□□□□□ -0.13
SORT1-203ENST00000471996 TRUB1Q8WWH5 349 aaKnown RBP14.27□□□□□ -0.13
SORT1-203ENST00000471996 SNAPC3Q92966 411 aa14.27□□□□□ -0.13
SORT1-203ENST00000471996 GALMQ96C23 342 aa14.27□□□□□ -0.13
SORT1-203ENST00000471996 TINAGL1Q9GZM7 467 aaPredicted RBP14.27□□□□□ -0.13
SORT1-203ENST00000471996 POMPQ9Y244 141 aa14.27□□□□□ -0.13
SORT1-203ENST00000471996 RAB29O14966 203 aa14.26□□□□□ -0.13
SORT1-203ENST00000471996 ST8SIA5O15466 376 aa14.26□□□□□ -0.13
SORT1-203ENST00000471996 NDUFB8O95169 186 aa14.26□□□□□ -0.13
SORT1-203ENST00000471996 BDKRB2P30411 391 aa14.26□□□□□ -0.13
SORT1-203ENST00000471996 PPP3R1P63098 170 aa14.26□□□□□ -0.13
SORT1-203ENST00000471996 ATP6AP1Q15904 470 aa14.26□□□□□ -0.13
SORT1-203ENST00000471996 GUCA2BQ16661 112 aa14.26□□□□□ -0.13
SORT1-203ENST00000471996 DEFB114Q30KQ6 69 aa14.26□□□□□ -0.13
SORT1-203ENST00000471996 SLC25A30Q5SVS4 291 aa14.26□□□□□ -0.13
SORT1-203ENST00000471996 MRPL30Q8TCC3 161 aaKnown RBP14.26□□□□□ -0.13
SORT1-203ENST00000471996 USMG5Q96IX5 58 aa14.26□□□□□ -0.13
SORT1-203ENST00000471996 GGTLC1Q9BX51 225 aa14.26□□□□□ -0.13
SORT1-203ENST00000471996 PARP12Q9H0J9 701 aaKnown RBP14.26□□□□□ -0.13
SORT1-203ENST00000471996 UBE2QL1A1L167 161 aa14.25□□□□□ -0.13
SORT1-203ENST00000471996 SPDEFO95238 335 aa14.25□□□□□ -0.13
SORT1-203ENST00000471996 GLAP06280 429 aa14.25□□□□□ -0.13
SORT1-203ENST00000471996 LYG2Q86SG7 212 aa14.25□□□□□ -0.13
SORT1-203ENST00000471996 WFDC3Q8IUB2 231 aa14.25□□□□□ -0.13
SORT1-203ENST00000471996 GPR148Q8TDV2 347 aa14.25□□□□□ -0.13
SORT1-203ENST00000471996 DYNLRB2Q8TF09 96 aa14.25□□□□□ -0.13
SORT1-203ENST00000471996 LGALS12Q96DT0 336 aa14.25□□□□□ -0.13
SORT1-203ENST00000471996 CYYR1Q96J86 154 aa14.25□□□□□ -0.13
SORT1-203ENST00000471996 TMEM68Q96MH6 324 aa14.25□□□□□ -0.13
SORT1-203ENST00000471996 TSNAXQ99598 290 aaKnown RBP14.25□□□□□ -0.13
SORT1-203ENST00000471996 ZC4H2Q9NQZ6 224 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms