RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 SPIN2AQ99865 258 aa7.57□□□□□ -1.2
PTPRE-207ENST00000471218 SPIN2BQ9BPZ2 258 aa7.57□□□□□ -1.2
PTPRE-207ENST00000471218 TMEM222Q9H0R3 208 aa7.57□□□□□ -1.2
PTPRE-207ENST00000471218 RDH8Q9NYR8 311 aa7.57□□□□□ -1.2
PTPRE-207ENST00000471218 CALYQ9NYX4 217 aa7.57□□□□□ -1.2
PTPRE-207ENST00000471218 SLC25A10Q9UBX3 287 aaPredicted RBP7.57□□□□□ -1.2
PTPRE-207ENST00000471218 MIOXQ9UGB7 285 aa7.57□□□□□ -1.2
PTPRE-207ENST00000471218 CACFD1Q9UGQ2 172 aa7.57□□□□□ -1.2
PTPRE-207ENST00000471218 KCNS2Q9ULS6 477 aa7.57□□□□□ -1.2
PTPRE-207ENST00000471218 TMED3Q9Y3Q3 217 aa7.57□□□□□ -1.2
PTPRE-207ENST00000471218 TMEM56-RWDD3S4R434 201 aa7.57□□□□□ -1.2
PTPRE-207ENST00000471218 ATG12O94817 140 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 CDS2O95674 445 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 GYPAP02724 150 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 SLC25A6P12236 298 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 SRD5A1P18405 259 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 CXCL3P19876 107 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 USF1P22415 310 aaPredicted RBP7.56□□□□□ -1.2
PTPRE-207ENST00000471218 F2RP25116 425 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 UCP1P25874 307 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 CEACAM6P40199 344 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 EFNA4P52798 201 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 FXYD4P59646 89 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 CATR1Q13166 79 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 TMEM187Q14656 261 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 CARTPTQ16568 116 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 FAM71F2Q6NXP2 309 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 TMEM65Q6PI78 240 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 GSG1LQ6UXU4 331 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 HEPN1Q6WQI6 88 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 LIAT1Q6ZQX7 453 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 BOLLQ8N9W6 283 aaKnown RBP7.56□□□□□ -1.2
PTPRE-207ENST00000471218 ZNRF1Q8ND25 227 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 OR52B4Q8NGK2 314 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 OR13A1Q8NGR1 328 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 OR2T35Q8NGX2 323 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 C8orf46Q8TAG6 207 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 SECTM1Q8WVN6 248 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 IL1F10Q8WWZ1 152 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 TNFRSF14Q92956 283 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 FYTTD1Q96QD9 318 aaKnown RBP7.56□□□□□ -1.2
PTPRE-207ENST00000471218 HSD17B10Q99714 261 aaKnown RBP7.56□□□□□ -1.2
PTPRE-207ENST00000471218 BEX1Q9HBH7 125 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 OR2S2Q9NQN1 319 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 PIPOXQ9P0Z9 390 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 METRNQ9UJH8 293 aa7.56□□□□□ -1.2
PTPRE-207ENST00000471218 TANC2Q9HCD6 1990 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 ARFGEF3Q5TH69 2177 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 IGHV3OR15-7A0A075B7D8 119 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 C3orf85A0A1B0GTC6 90 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 GOSR2O14653 212 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 RBFOX2O43251 390 aaKnown RBP eCLIP7.55□□□□□ -1.2
PTPRE-207ENST00000471218 ADAM20O43506 726 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 PGLYRP1O75594 196 aaPredicted RBP7.55□□□□□ -1.2
PTPRE-207ENST00000471218 SLC25A4P12235 298 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 DAOP14920 347 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 KIR2DS2P43631 304 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 ARHGDIBP52566 201 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 EDDM3BP56851 147 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 H2BFSP57053 126 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 LOXL3P58215 753 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 RPL31P62899 125 aaKnown RBP7.55□□□□□ -1.2
PTPRE-207ENST00000471218 TAGLNQ01995 201 aaKnown RBP7.55□□□□□ -1.2
PTPRE-207ENST00000471218 BAMBIQ13145 260 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 SCGB2A2Q13296 93 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 EDDM3AQ14507 147 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 OR1L1Q8NH94 360 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 MRGPRDQ8TDS7 321 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 MSI2Q96DH6 328 aaKnown RBP7.55□□□□□ -1.2
PTPRE-207ENST00000471218 ADTRPQ96IZ2 230 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 CYYR1Q96J86 154 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 CCL13Q99616 98 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 TMEM246Q9BRR3 403 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 GFOD1Q9NXC2 390 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 GNG12Q9UBI6 72 aa7.55□□□□□ -1.2
PTPRE-207ENST00000471218 RPUSD1Q9UJJ7 312 aaKnown RBP7.55□□□□□ -1.2
PTPRE-207ENST00000471218 IGHV4-30-2A0A087WSY4 118 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 A0A087X0M5 115 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 IGKV1D-13A0A0B4J2D9 117 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 A0A1B0GX30 115 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 hCG_1809904A0A1W2PP81 198 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 A0A1W2PPE2 198 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 A0A1W2PR64 198 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 A0A1W2PRV1 198 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 IGKV1-13P0DP09 117 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 PI3P19957 117 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 VDAC1P21796 283 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 SSTR5P35346 364 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 PDLIM4P50479 330 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 CD300CQ08708 224 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 ANKRD55Q3KP44 614 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 ZNF818PQ6ZRF7 136 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 TBC1D26Q86UD7 250 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 FAM219AQ8IW50 185 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 ZCCHC24Q8N2G6 241 aaKnown RBP7.54□□□□□ -1.2
PTPRE-207ENST00000471218 LINC00311Q8N616 119 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 FAM216BQ8N7L0 139 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 OR8B3Q8NGG8 313 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 ZNF596Q8TC21 504 aa7.54□□□□□ -1.2
PTPRE-207ENST00000471218 CASTOR1Q8WTX7 329 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms