RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 PLXNB1O43157 2135 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 NDUFA2O43678 99 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 YPEL1O60688 119 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 IGKV1-39P01597 117 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 IGKV1D-39P04432 117 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 HOXB5P09067 269 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 GIPP09681 153 aaPredicted RBP6.84□□□□□ -1.32
GTF3A-206ENST00000470606 TMEM33P57088 247 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 MEF2CQ06413 473 aaPredicted RBP6.84□□□□□ -1.32
GTF3A-206ENST00000470606 IL15RAQ13261 267 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 TMEM155Q4W5P6 130 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 ZNF585BQ52M93 769 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 TRAT1Q6PIZ9 186 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 BTNL3Q6UXE8 466 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 LYZL2Q7Z4W2 148 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 ODF3L1Q8IXM7 274 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 OR51H1Q8NH63 302 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 GRPEL2Q8TAA5 225 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 C18orf12Q96KH6 178 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 YPEL2Q96QA6 119 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 TMEM222Q9H0R3 208 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 SDHAF2Q9NX18 166 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 GNG12Q9UBI6 72 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 SHPKQ9UHJ6 478 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 JPT1Q9UK76 154 aa6.84□□□□□ -1.32
GTF3A-206ENST00000470606 UBE2J1Q9Y385 318 aaPredicted RBP6.84□□□□□ -1.32
GTF3A-206ENST00000470606 CSPG4Q6UVK1 2322 aa6.83□□□□□ -1.32
GTF3A-206ENST00000470606 TEX15Q9BXT5 2789 aa6.83□□□□□ -1.32
GTF3A-206ENST00000470606 hADV38S2A0JD32 116 aa6.83□□□□□ -1.32
GTF3A-206ENST00000470606 GOSR1O95249 250 aa6.83□□□□□ -1.32
GTF3A-206ENST00000470606 F2RP25116 425 aa6.83□□□□□ -1.32
GTF3A-206ENST00000470606 NFYBP25208 207 aa6.83□□□□□ -1.32
GTF3A-206ENST00000470606 RPL39P5Q59GN2 51 aa6.83□□□□□ -1.32
GTF3A-206ENST00000470606 WDR25Q64LD2 544 aaPredicted RBP6.83□□□□□ -1.32
GTF3A-206ENST00000470606 HIST2H2BCQ6DN03 193 aa6.83□□□□□ -1.32
GTF3A-206ENST00000470606 LPCAT3Q6P1A2 487 aa6.83□□□□□ -1.32
GTF3A-206ENST00000470606 LIAT1Q6ZQX7 453 aa6.83□□□□□ -1.32
GTF3A-206ENST00000470606 ZNF645Q8N7E2 425 aa6.83□□□□□ -1.32
GTF3A-206ENST00000470606 LRTM2Q8N967 370 aa6.83□□□□□ -1.32
GTF3A-206ENST00000470606 DRAXINQ8NBI3 349 aaPredicted RBP6.83□□□□□ -1.32
GTF3A-206ENST00000470606 ZNF251Q9BRH9 671 aa6.83□□□□□ -1.32
GTF3A-206ENST00000470606 TAS2R3Q9NYW6 316 aa6.83□□□□□ -1.32
GTF3A-206ENST00000470606 IDI2-AS1Q9NZ38 188 aa6.83□□□□□ -1.32
GTF3A-206ENST00000470606 RPUSD1Q9UJJ7 312 aaKnown RBP6.83□□□□□ -1.32
GTF3A-206ENST00000470606 KCNS2Q9ULS6 477 aa6.83□□□□□ -1.32
GTF3A-206ENST00000470606 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.83□□□□□ -1.325e-14■■■■■ 28.5
GTF3A-206ENST00000470606 CREBBPQ92793 2442 aa6.83□□□□□ -1.32
GTF3A-206ENST00000470606 TLN2Q9Y4G6 2542 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 ITPR3Q14573 2671 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 A0A0G2JRQ6 117 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 FAM25EA8MYX2 175 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 F5H0A9 414 aaPredicted RBP6.82□□□□□ -1.32
GTF3A-206ENST00000470606 RAMP3O60896 148 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 CDS2O95674 445 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 UCP1P25874 307 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 ZFP36P26651 326 aaKnown RBP6.82□□□□□ -1.32
GTF3A-206ENST00000470606 RAP2BP61225 183 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 KCNJ8Q15842 424 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 IZUMO4Q1ZYL8 232 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 GGNBP1Q5YKI7 109 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 C11orf88Q6PI97 169 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 HEPN1Q6WQI6 88 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 FAM185AQ8N0U4 392 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 SLC35G3Q8N808 338 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 RAB1CQ92928 201 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 NINJ1Q92982 152 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 TMEM56Q96MV1 263 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 ZNF714Q96N38 554 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 CCL19Q99731 98 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 BPESC1Q9GZL8 116 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 PATZ1Q9HBE1 687 aaKnown RBP6.82□□□□□ -1.32
GTF3A-206ENST00000470606 RAB18Q9NP72 206 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 RBM7Q9Y580 266 aaKnown RBP6.82□□□□□ -1.32
GTF3A-206ENST00000470606 TMEM56-RWDD3S4R434 201 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 TET2Q6N021 2002 aaPredicted RBP6.82□□□□□ -1.32
GTF3A-206ENST00000470606 C13orf42A0A1B0GVH6 325 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 C17orf98A8MV24 154 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 KIAA1324LA8MWY0 1029 aaPredicted RBP6.82□□□□□ -1.32
GTF3A-206ENST00000470606 H0Y980 276 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 H0YIZ8 118 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 J3QKU1 62 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 KCNAB3O43448 404 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 COX6B1P14854 86 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 DNASE1P24855 282 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 GNG10P50151 68 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 Q3ZCU0 254 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 CMTM1Q8IZ96 169 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 SELENOHQ8IZQ5 122 aaKnown RBP6.82□□□□□ -1.32
GTF3A-206ENST00000470606 C9orf62Q8N4C0 152 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 CCDC71LQ8N9Z2 235 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 LY6G5BQ8NDX9 201 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 COQ8AQ8NI60 647 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 C8orf46Q8TAG6 207 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 PPP1R1CQ8WVI7 109 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 NEIL1Q96FI4 390 aaPredicted RBP6.82□□□□□ -1.32
GTF3A-206ENST00000470606 AKR1E2Q96JD6 320 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 SUCNR1Q9BXA5 334 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 MIOXQ9UGB7 285 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 KCNIP3Q9Y2W7 256 aa6.82□□□□□ -1.32
GTF3A-206ENST00000470606 SAA2-SAA4A0A096LPE2 208 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms