RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 TRIM45Q9H8W5 580 aaPredicted RBP3.39□□□□□ -1.87
GCFC2-205ENST00000470197 NIPBLQ6KC79 2804 aaeCLIP3.39□□□□□ -1.87
GCFC2-205ENST00000470197 FLNAP21333 2647 aaKnown RBP3.39□□□□□ -1.87
GCFC2-205ENST00000470197 IGKV3D-11A0A0A0MRZ8 115 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 A0A1W2PP18 115 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 GNG14A0A1W2PPG7 69 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 UBFD1O14562 309 aaKnown RBP3.39□□□□□ -1.87
GCFC2-205ENST00000470197 SERPINB7O75635 380 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 PIAS1O75925 651 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 C1QAP02745 245 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 NEFHP12036 1026 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 ME2P23368 584 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 CDK9P50750 372 aaKnown RBP3.39□□□□□ -1.87
GCFC2-205ENST00000470197 CHRFAM7AQ494W8 412 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 PRNTQ86SH4 94 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 SFXN3Q9BWM7 321 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 OR11A1Q9GZK7 315 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 SLC25A22Q9H936 323 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 ZFHX3Q15911 3703 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 TRAV39A0A0B4J263 110 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 A6NDN8 102 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 TNFRSF11BO00300 401 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 PSMG1O95456 288 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 RAB36O95755 333 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 FABP3P05413 133 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 ZP3P21754 424 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 CTRLP40313 264 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 ZNF136P52737 540 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 TSPAN5P62079 268 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 TFF3Q07654 80 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 RBM48Q5RL73 367 aaKnown RBP3.39□□□□□ -1.87
GCFC2-205ENST00000470197 OAFQ86UD1 273 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 CADM2Q8N3J6 435 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 CDS1Q92903 461 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 TM4SF18Q96CE8 201 aa3.39□□□□□ -1.87
GCFC2-205ENST00000470197 ZNF223Q9UK11 482 aaPredicted RBP3.39□□□□□ -1.87
GCFC2-205ENST00000470197 SERPINB1P30740 379 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 DR1Q01658 176 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 ZNF45Q02386 682 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 TBC1D28Q2M2D7 210 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 LRRC10Q5BKY1 277 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 LRRC25Q8N386 305 aaPredicted RBP3.38□□□□□ -1.87
GCFC2-205ENST00000470197 ARIH2OSQ8N7S6 290 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 C9orf106Q8NAJ2 232 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 GHSRQ92847 366 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 PPP1R14BQ96C90 147 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 TBL1XR1Q9BZK7 514 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 A0A0B4J2A0 478 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 TINCRA0A1B0GVN0 87 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 GLSO94925 669 aaPredicted RBP3.38□□□□□ -1.87
GCFC2-205ENST00000470197 CTXN2P0C2S0 81 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 TSPOP30536 169 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 PRSS3P35030 304 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 CD79BP40259 229 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 MLLT11Q13015 90 aaPredicted RBP3.38□□□□□ -1.87
GCFC2-205ENST00000470197 SBSNQ6UWP8 590 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 ATP6V1C2Q8NEY4 427 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 OR5D18Q8NGL1 313 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 MRAP2Q96G30 205 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 PAXXQ9BUH6 204 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 MS4A8Q9BY19 250 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 C12orf4Q9NQ89 552 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 SHPKQ9UHJ6 478 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 MCTS1Q9ULC4 181 aaKnown RBP3.38□□□□□ -1.87
GCFC2-205ENST00000470197 OTOGQ6ZRI0 2925 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 ABCA1O95477 2261 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 A0A0A6YYH2 397 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 A0A1B0GXF2 115 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 RBFOX3A6NFN3 312 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 A6NJ64 397 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 SMIM24O75264 130 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 THY1P04216 161 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 IDH2P48735 452 aaKnown RBP3.38□□□□□ -1.87
GCFC2-205ENST00000470197 CLEC12BQ2HXU8 276 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 ZNF791Q3KP31 576 aaPredicted RBP3.38□□□□□ -1.87
GCFC2-205ENST00000470197 CEACAM21Q3KPI0 293 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 C3orf62Q6ZUJ4 267 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 POM121L12Q8N7R1 296 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 ZNF721Q8TF20 911 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 MARC2Q969Z3 335 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 EXOSC8Q96B26 276 aaKnown RBP3.38□□□□□ -1.87
GCFC2-205ENST00000470197 FXYD5Q96DB9 178 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 C1orf147Q96MC9 270 aaPredicted RBP3.38□□□□□ -1.87
GCFC2-205ENST00000470197 SERPINI1Q99574 410 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 PYGO2Q9BRQ0 406 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 RBM12B-AS1Q9P1G2 102 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 SIGLEC7Q9Y286 467 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 ORC6Q9Y5N6 252 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 MED12Q93074 2177 aa3.38□□□□□ -1.87
GCFC2-205ENST00000470197 EBPQ15125 230 aaKnown RBP3.37□□□□□ -1.87
GCFC2-205ENST00000470197 IMPG1Q17R60 797 aa3.37□□□□□ -1.87
GCFC2-205ENST00000470197 HHATQ5VTY9 493 aa3.37□□□□□ -1.87
GCFC2-205ENST00000470197 RNF165Q6ZSG1 346 aa3.37□□□□□ -1.87
GCFC2-205ENST00000470197 TMEM179BQ7Z7N9 219 aa3.37□□□□□ -1.87
GCFC2-205ENST00000470197 LGI3Q8N145 548 aa3.37□□□□□ -1.87
GCFC2-205ENST00000470197 RNF175Q8N4F7 328 aa3.37□□□□□ -1.87
GCFC2-205ENST00000470197 OR5L1Q8NGL2 311 aa3.37□□□□□ -1.87
GCFC2-205ENST00000470197 OR52P1PQ8NH57 321 aa3.37□□□□□ -1.87
GCFC2-205ENST00000470197 MUCL1Q96DR8 90 aa3.37□□□□□ -1.87
GCFC2-205ENST00000470197 BCL2L14Q9BZR8 327 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms