RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 ZNF471Q9BX82 626 aaPredicted RBP7.77□□□□□ -1.17
SMC1A-205ENST00000469129 TAS2R3Q9NYW6 316 aa7.77□□□□□ -1.17
SMC1A-205ENST00000469129 OR5AC2Q9NZP5 309 aa7.77□□□□□ -1.17
SMC1A-205ENST00000469129 SLC25A10Q9UBX3 287 aaPredicted RBP7.77□□□□□ -1.17
SMC1A-205ENST00000469129 LINC00312Q9Y6C7 94 aa7.77□□□□□ -1.17
SMC1A-205ENST00000469129 HELZ2Q9BYK8 2649 aaKnown RBP7.77□□□□□ -1.17
SMC1A-205ENST00000469129 GCN1Q92616 2671 aaKnown RBP7.76□□□□□ -1.17
SMC1A-205ENST00000469129 KBTBD11-OT1A0A1B0GTJ5 212 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 A0A1B0GU03 582 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 F5H0A9 414 aaPredicted RBP7.76□□□□□ -1.17
SMC1A-205ENST00000469129 H0YIZ8 118 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 WRBO00258 174 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 TMPRSS2O15393 492 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 ADAM20O43506 726 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 NDUFB3O43676 98 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 SPDEFO95238 335 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 GOSR1O95249 250 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 FSTL3O95633 263 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 IGLV2-14P01704 120 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 MBPP02686 304 aaPredicted RBP7.76□□□□□ -1.17
SMC1A-205ENST00000469129 TPT1P13693 172 aaKnown RBP7.76□□□□□ -1.17
SMC1A-205ENST00000469129 MMP9P14780 707 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 ZNF16P17020 682 aaPredicted RBP7.76□□□□□ -1.17
SMC1A-205ENST00000469129 LOXP28300 417 aaPredicted RBP7.76□□□□□ -1.17
SMC1A-205ENST00000469129 KIR2DS2P43631 304 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 NKX2-1P43699 371 aaPredicted RBP7.76□□□□□ -1.17
SMC1A-205ENST00000469129 P2RY1P47900 373 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 LRRC10Q5BKY1 277 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 FAM201AQ5SY85 155 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 GPR157Q5UAW9 335 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 FAM219AQ8IW50 185 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 FOXRED2Q8IWF2 684 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 FAM216BQ8N7L0 139 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.76□□□□□ -1.17
SMC1A-205ENST00000469129 DEFB108BQ8NET1 73 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 OR52M1Q8NGK5 317 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 STOML3Q8TAV4 291 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 CD300LFQ8TDQ1 290 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 CORO2AQ92828 525 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 RRNAD1Q96FB5 475 aaKnown RBP7.76□□□□□ -1.17
SMC1A-205ENST00000469129 FAM210AQ96ND0 272 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 RNF126Q9BV68 326 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 RAB1BQ9H0U4 201 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 CBLN4Q9NTU7 201 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 IDI2-AS1Q9NZ38 188 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 KAAG1Q9UBP8 84 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 CLN8Q9UBY8 286 aa7.76□□□□□ -1.17
SMC1A-205ENST00000469129 DIDO1Q9BTC0 2240 aaKnown RBP7.76□□□□□ -1.17
SMC1A-205ENST00000469129 ANKHD1Q8IWZ3 2542 aaKnown RBP7.76□□□□□ -1.17
SMC1A-205ENST00000469129 ICE1Q9Y2F5 2266 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 IGHV3-43A0A0B4J1X8 118 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 SIAH2O43255 324 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 GPR137BO60478 399 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 PLAUP00749 431 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 IGHV3-43DP0DP04 118 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 SELLP14151 372 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 NDUFB7P17568 137 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 GNLYP22749 145 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 RPL12P30050 165 aaKnown RBP7.75□□□□□ -1.17
SMC1A-205ENST00000469129 VAMP2P63027 116 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 SNTB1Q13884 538 aaKnown RBP7.75□□□□□ -1.17
SMC1A-205ENST00000469129 MST1LQ2TV78 715 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 Q3ZCU0 254 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 MORN2Q502X0 79 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 RFESDQ8TAC1 157 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 LRRC20Q8TCA0 184 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 TCTEX1D2Q8WW35 142 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 ITLN2Q8WWU7 325 aaPredicted RBP7.75□□□□□ -1.17
SMC1A-205ENST00000469129 CCL17Q92583 94 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 DCTN5Q9BTE1 182 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 ABHD14AQ9BUJ0 271 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 GSX2Q9BZM3 304 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 PARP12Q9H0J9 701 aaKnown RBP7.75□□□□□ -1.17
SMC1A-205ENST00000469129 LINC00574Q9H8X3 128 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 GFOD1Q9NXC2 390 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 PSG11Q9UQ72 335 aa7.75□□□□□ -1.17
SMC1A-205ENST00000469129 RCL1Q9Y2P8 373 aaKnown RBP7.75□□□□□ -1.17
SMC1A-205ENST00000469129 YLPM1P49750 1951 aaKnown RBP7.75□□□□□ -1.17
SMC1A-205ENST00000469129 TRBV23-1A0A0A0MS06 115 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 LINC00862A6NCI5 91 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 FAM90A26D6RGX4 464 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 ST8SIA5O15466 376 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 CLDN1O95832 211 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 CFDP00746 253 aaPredicted RBP7.74□□□□□ -1.17
SMC1A-205ENST00000469129 GAPDHP04406 335 aaKnown RBP7.74□□□□□ -1.17
SMC1A-205ENST00000469129 CGB3P0DN86 165 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 CGB7P0DN87 165 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 HKR1P10072 659 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 DAOP14920 347 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 LOXL3P58215 753 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 EIF4EBP1Q13541 118 aaPredicted RBP7.74□□□□□ -1.17
SMC1A-205ENST00000469129 CDSNQ15517 529 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 LTC4SQ16873 150 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 C17orf58Q2M2W7 97 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 EIF5AL1Q6IS14 154 aaKnown RBP7.74□□□□□ -1.17
SMC1A-205ENST00000469129 ALKAL2Q6UX46 152 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 ZCCHC24Q8N2G6 241 aaKnown RBP7.74□□□□□ -1.17
SMC1A-205ENST00000469129 NEU4Q8WWR8 484 aaPredicted RBP7.74□□□□□ -1.17
SMC1A-205ENST00000469129 ADTRPQ96IZ2 230 aa7.74□□□□□ -1.17
SMC1A-205ENST00000469129 ZNF714Q96N38 554 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms