RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 BHLHE23Q8NDY6 225 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 OR51T1Q8NGJ9 327 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 OR10G9Q8NGN4 311 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 OR5C1Q8NGR4 320 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 OR2AJ1Q8NGZ0 328 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 OR52N5Q8NH56 324 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 LHX4Q969G2 390 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 SPSB4Q96A44 273 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 CNRIP1Q96F85 164 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-207ENST00000468925 POM121L2Q96KW2 1035 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 WDR61Q9GZS3 305 aaKnown RBP4.15□□□□□ -1.75
SF3B1-207ENST00000468925 METTL7AQ9H8H3 244 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF286AQ9HBT8 521 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 MMP25Q9NPA2 562 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 NRN1Q9NPD7 142 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 KCNIP2Q9NS61 270 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 SLC7A10Q9NS82 523 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 PLEKHJ1Q9NW61 149 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 IL36BQ9NZH7 164 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 JKAMPQ9P055 326 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 KLHL13Q9P2N7 655 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 RABAC1Q9UI14 185 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 HS3ST2Q9Y278 367 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 POLR1DQ9Y2S0 133 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 RNF115Q9Y4L5 304 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 KCNE3Q9Y6H6 103 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 SCN5AQ14524 2016 aa4.15□□□□□ -1.75
SF3B1-207ENST00000468925 CHD3Q12873 2000 aaKnown RBP4.14□□□□□ -1.75
SF3B1-207ENST00000468925 SCN3AQ9NY46 2000 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 CACNA1AO00555 2505 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 C17orf102A2RUQ5 167 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 LRRC3CA6NJW4 275 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 GRXCR1A8MXD5 290 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 FAM90A26D6RGX4 464 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 SDCBPO00560 298 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-207ENST00000468925 WNT10BO00744 389 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 SIVA1O15304 175 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 CRXO43186 299 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-207ENST00000468925 TBL1XO60907 577 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 RBMXL2O75526 392 aaKnown RBP4.14□□□□□ -1.75
SF3B1-207ENST00000468925 STC2O76061 302 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 TIMP1P01033 207 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 CGAP01215 116 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 IGHMP01871 453 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 AMY1AP04745 511 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 OR9G9P0C7N8 305 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 CT45A6P0DMU7 189 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 CT45A5P0DMU8 189 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 CT45A7P0DMV0 189 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF823P16415 610 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 TNFRSF1AP19438 455 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 COX5AP20674 150 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 OMGP23515 440 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 CRYBB3P26998 211 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 PEBP1P30086 187 aaKnown RBP4.14□□□□□ -1.75
SF3B1-207ENST00000468925 SRD5A2P31213 254 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 CCR2P41597 374 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 AMTP48728 403 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 LHX2P50458 406 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 RAB9AP51151 201 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 DYNLT3P51808 116 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 TCL1AP56279 114 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 FOXL2P58012 376 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 PLP1P60201 277 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 ZXDAP98168 799 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 PRDX1Q06830 199 aaKnown RBP4.14□□□□□ -1.75
SF3B1-207ENST00000468925 HSD52Q0P140 79 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 SRSF6Q13247 344 aaKnown RBP4.14□□□□□ -1.75
SF3B1-207ENST00000468925 TSTA3Q13630 321 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-207ENST00000468925 RNPS1Q15287 305 aaKnown RBP4.14□□□□□ -1.75
SF3B1-207ENST00000468925 LRRC75BQ2VPJ9 315 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 NRN1LQ496H8 165 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 CT45A1Q5HYN5 189 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 FFAR4Q5NUL3 377 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 PHYHD1Q5SRE7 291 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 SPATA46Q5T0L3 261 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 BVES-AS1Q5T3Y7 98 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 FAM78BQ5VT40 261 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 AMMECR1LQ6DCA0 310 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 UFSP1Q6NVU6 142 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 FAM180AQ6UWF9 173 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 Q6ZVL8 140 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 FAM57BQ71RH2 274 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF695Q8IW36 515 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 TMEM123Q8N131 208 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 MRPL43Q8N983 215 aaKnown RBP4.14□□□□□ -1.75
SF3B1-207ENST00000468925 LRRC75AQ8NAA5 344 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 C5orf17Q8NAS9 161 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 OR4F17Q8NGA8 305 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 CT45A3Q8NHU0 189 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 RAB1CQ92928 201 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 MSI2Q96DH6 328 aaKnown RBP4.14□□□□□ -1.75
SF3B1-207ENST00000468925 OR4F4Q96R69 305 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 FAM110AQ9BQ89 295 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 SPANXDQ9BXN6 97 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 TTTY10Q9BZA0 68 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 LINC00470Q9BZP3 86 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 TMEM191AQ9H0A3 160 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 LYRM4Q9HD34 91 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 MRPL16Q9NX20 251 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms