RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 TMEM215Q68D42 235 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 ELP2Q6IA86 826 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 SPNS3Q6ZMD2 512 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 LRRC25Q8N386 305 aaPredicted RBP2.33□□□□□ -2.04
XRN1-207ENST00000468894 OR52E4Q8NGH9 312 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 OR10A6Q8NH74 314 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 ZCCHC13Q8WW36 166 aaKnown RBP2.33□□□□□ -2.04
XRN1-207ENST00000468894 ASB17Q8WXJ9 295 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 C12orf43Q96C57 262 aaKnown RBP2.33□□□□□ -2.04
XRN1-207ENST00000468894 HAUS1Q96CS2 278 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 TVP23CQ96ET8 276 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 IMP4Q96G21 291 aaKnown RBP2.33□□□□□ -2.04
XRN1-207ENST00000468894 C14orf144Q96I85 54 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 C20orf144Q9BQM9 153 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 SHANK2-AS3Q9BTD1 123 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 TMEM243Q9BU79 118 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 GGACTQ9BVM4 153 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 PLA2G12AQ9BZM1 189 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 CHST5Q9GZS9 411 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 NMNAT1Q9HAN9 279 aaPredicted RBP2.33□□□□□ -2.04
XRN1-207ENST00000468894 FAIMQ9NVQ4 179 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 FAM206AQ9NX38 181 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 VPS29Q9UBQ0 182 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 UTP11Q9Y3A2 253 aaKnown RBP2.33□□□□□ -2.04
XRN1-207ENST00000468894 KLF12Q9Y4X4 402 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 NALCNQ8IZF0 1738 aa2.33□□□□□ -2.04
XRN1-207ENST00000468894 A0A0G2JMP0 313 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 PVALEFA0A1B0GWK0 134 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 ISPDA4D126 451 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 CCDC160A6NGH7 325 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 FAM159BA6NKW6 160 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 PPP5D1E7EU14 171 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 TNFRSF11BO00300 401 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 MFNGO00587 321 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 GABRPO00591 440 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 NME4O00746 187 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 TAAR5O14804 337 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 IFNA1P01562 189 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 SERPINA7P05543 415 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 OR5AL1P0C617 328 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 SMIM6P0DI80 62 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 LGALS3P17931 250 aaKnown RBP2.32□□□□□ -2.04
XRN1-207ENST00000468894 RAB5AP20339 215 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 CA5AP35218 305 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 RCVRNP35243 200 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 ARL2P36404 184 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 POLR2IP36954 125 aaKnown RBP2.32□□□□□ -2.04
XRN1-207ENST00000468894 LGALS7P47929 136 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 GCLMP48507 274 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 TAS2R46P59540 309 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 GTF2BQ00403 316 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 RPL18AQ02543 176 aaKnown RBP2.32□□□□□ -2.04
XRN1-207ENST00000468894 FMODQ06828 376 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 PNOCQ13519 176 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 EDDM3AQ14507 147 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 SURF2Q15527 256 aaPredicted RBP2.32□□□□□ -2.04
XRN1-207ENST00000468894 GRK1Q15835 563 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 LRRC26Q2I0M4 334 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 SLC25A35Q3KQZ1 300 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 TMEM97Q5BJF2 176 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 C9orf64Q5T6V5 341 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 HENMT1Q5T8I9 393 aaKnown RBP2.32□□□□□ -2.04
XRN1-207ENST00000468894 C1orf195Q5TG92 126 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 KCTD16Q68DU8 428 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 HBMQ6B0K9 141 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 COMMD7Q86VX2 200 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 ZBTB8OSQ8IWT0 167 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 SLC35F6Q8N357 371 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 SPICQ8N5J4 248 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 TMEM86BQ8N661 226 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 GATD1Q8NB37 220 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 OR4M2Q8NGB6 313 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 EEF1AKMT1Q8WVE0 214 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 ZHX1-C8orf76Q96EF9 292 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 PDCD1LG2Q9BQ51 273 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 VPS25Q9BRG1 176 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 C1orf50Q9BV19 199 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 TAPBPLQ9BX59 468 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 MS4A8Q9BY19 250 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 SLIRPQ9GZT3 109 aaKnown RBP2.32□□□□□ -2.04
XRN1-207ENST00000468894 TXNIPQ9H3M7 391 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 TPT1P8Q9HAU6 139 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 LRTM1Q9HBL6 345 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 BIN3Q9NQY0 253 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 RGS18Q9NS28 235 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 DDIT4Q9NX09 232 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 COMMD9Q9P000 198 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 ZNF230Q9UIE0 474 aaPredicted RBP2.32□□□□□ -2.04
XRN1-207ENST00000468894 SNX10Q9Y5X0 201 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 KIAA1671Q9BY89 1806 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 TSPOAP1O95153 1857 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 FANCMQ8IYD8 2048 aa2.32□□□□□ -2.04
XRN1-207ENST00000468894 SBF1O95248 1867 aa2.31□□□□□ -2.04
XRN1-207ENST00000468894 CCDC88AQ3V6T2 1871 aa2.31□□□□□ -2.04
XRN1-207ENST00000468894 NUP210Q8TEM1 1887 aaPredicted RBP2.31□□□□□ -2.04
XRN1-207ENST00000468894 MYH6P13533 1939 aa2.31□□□□□ -2.04
XRN1-207ENST00000468894 ATG2AQ2TAZ0 1938 aa2.31□□□□□ -2.04
XRN1-207ENST00000468894 EXOC1LA0A1B0GW35 172 aa2.31□□□□□ -2.04
XRN1-207ENST00000468894 CEACAM18A8MTB9 384 aa2.31□□□□□ -2.04
XRN1-207ENST00000468894 F5H5K5 113 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms