RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 DGCR2P98153 550 aa17.02■□□□□ 0.32
TTC28-204ENST00000468807 CD69Q07108 199 aa17.02■□□□□ 0.32
TTC28-204ENST00000468807 TPBGQ13641 420 aa17.02■□□□□ 0.32
TTC28-204ENST00000468807 TRAM1Q15629 374 aa17.02■□□□□ 0.32
TTC28-204ENST00000468807 C5orf64Q2M2E5 130 aa17.02■□□□□ 0.32
TTC28-204ENST00000468807 LIN54Q6MZP7 749 aa17.02■□□□□ 0.32
TTC28-204ENST00000468807 C4orf3Q8WVX3 66 aa17.02■□□□□ 0.32
TTC28-204ENST00000468807 GFI1Q99684 422 aa17.02■□□□□ 0.32
TTC28-204ENST00000468807 PARP12Q9H0J9 701 aaKnown RBP17.02■□□□□ 0.32
TTC28-204ENST00000468807 OR51J1Q9H342 316 aa17.02■□□□□ 0.32
TTC28-204ENST00000468807 RIMS4Q9H426 269 aaPredicted RBP17.02■□□□□ 0.32
TTC28-204ENST00000468807 DUSP21Q9H596 190 aa17.02■□□□□ 0.32
TTC28-204ENST00000468807 ZMAT5Q9UDW3 170 aaKnown RBP17.02■□□□□ 0.32
TTC28-204ENST00000468807 IGHV7-81A0A0B4J1V7 117 aa17.01■□□□□ 0.31
TTC28-204ENST00000468807 HSPA12AO43301 675 aa17.01■□□□□ 0.31
TTC28-204ENST00000468807 HLA-DRB1P01911 266 aa17.01■□□□□ 0.31
TTC28-204ENST00000468807 PSMA1P25786 263 aaKnown RBP17.01■□□□□ 0.31
TTC28-204ENST00000468807 MAP2K4P45985 399 aa17.01■□□□□ 0.31
TTC28-204ENST00000468807 HLA-DRB3P79483 266 aa17.01■□□□□ 0.31
TTC28-204ENST00000468807 PLGLAQ15195 96 aa17.01■□□□□ 0.31
TTC28-204ENST00000468807 FAM71F2Q6NXP2 309 aa17.01■□□□□ 0.31
TTC28-204ENST00000468807 ZNF880Q6PDB4 577 aa17.01■□□□□ 0.31
TTC28-204ENST00000468807 GLDNQ6ZMI3 551 aaPredicted RBP17.01■□□□□ 0.31
TTC28-204ENST00000468807 ABHD14BQ96IU4 210 aa17.01■□□□□ 0.31
TTC28-204ENST00000468807 OR1A1Q9P1Q5 309 aa17.01■□□□□ 0.31
TTC28-204ENST00000468807 TRAV41A0A0B4J266 112 aa17■□□□□ 0.31
TTC28-204ENST00000468807 H7C2Y5 167 aa17■□□□□ 0.31
TTC28-204ENST00000468807 CPEP16870 476 aa17■□□□□ 0.31
TTC28-204ENST00000468807 VEGFCP49767 419 aa17■□□□□ 0.31
TTC28-204ENST00000468807 MLLT11Q13015 90 aaPredicted RBP17■□□□□ 0.31
TTC28-204ENST00000468807 ECSCRQ19T08 205 aa17■□□□□ 0.31
TTC28-204ENST00000468807 C11orf87Q6NUJ2 197 aa17■□□□□ 0.31
TTC28-204ENST00000468807 OR11H1Q8NG94 326 aa17■□□□□ 0.31
TTC28-204ENST00000468807 ABHD5Q8WTS1 349 aa17■□□□□ 0.31
TTC28-204ENST00000468807 OR5B12Q96R08 314 aa17■□□□□ 0.31
TTC28-204ENST00000468807 CHCHD6Q9BRQ6 235 aa17■□□□□ 0.31
TTC28-204ENST00000468807 KLK15Q9H2R5 256 aa17■□□□□ 0.31
TTC28-204ENST00000468807 ISYNA1Q9NPH2 558 aa17■□□□□ 0.31
TTC28-204ENST00000468807 ZNF580Q9UK33 172 aa17■□□□□ 0.31
TTC28-204ENST00000468807 SEC14L6B5MCN3 397 aa16.99■□□□□ 0.31
TTC28-204ENST00000468807 GSTP1P09211 210 aaKnown RBP16.99■□□□□ 0.31
TTC28-204ENST00000468807 CT45A6P0DMU7 189 aa16.99■□□□□ 0.31
TTC28-204ENST00000468807 CT45A5P0DMU8 189 aa16.99■□□□□ 0.31
TTC28-204ENST00000468807 CT45A7P0DMV0 189 aa16.99■□□□□ 0.31
TTC28-204ENST00000468807 CD37P11049 281 aa16.99■□□□□ 0.31
TTC28-204ENST00000468807 ZBTB25P24278 435 aa16.99■□□□□ 0.31
TTC28-204ENST00000468807 CEACAM6P40199 344 aa16.99■□□□□ 0.31
TTC28-204ENST00000468807 FABP5Q01469 135 aa16.99■□□□□ 0.31
TTC28-204ENST00000468807 VAX1Q5SQQ9 334 aa16.99■□□□□ 0.31
TTC28-204ENST00000468807 C9orf66Q5T8R8 295 aa16.99■□□□□ 0.31
TTC28-204ENST00000468807 NPBQ8NG41 125 aa16.99■□□□□ 0.31
TTC28-204ENST00000468807 ARHGAP5-AS1Q96IT6 56 aa16.99■□□□□ 0.31
TTC28-204ENST00000468807 MGLLQ99685 303 aa16.99■□□□□ 0.31
TTC28-204ENST00000468807 FBXL15Q9H469 300 aa16.99■□□□□ 0.31
TTC28-204ENST00000468807 GNB4Q9HAV0 340 aa16.99■□□□□ 0.31
TTC28-204ENST00000468807 C12orf4Q9NQ89 552 aa16.99■□□□□ 0.31
TTC28-204ENST00000468807 A3GALT2U3KPV4 340 aa16.99■□□□□ 0.31
TTC28-204ENST00000468807 OR5H14A6NHG9 310 aa16.98■□□□□ 0.31
TTC28-204ENST00000468807 SCTP09683 121 aa16.98■□□□□ 0.31
TTC28-204ENST00000468807 CRHBPP24387 322 aa16.98■□□□□ 0.31
TTC28-204ENST00000468807 PPIFP30405 207 aaKnown RBP16.98■□□□□ 0.31
TTC28-204ENST00000468807 PRSS48Q7RTY5 328 aa16.98■□□□□ 0.31
TTC28-204ENST00000468807 FAM89BQ8N5H3 189 aa16.98■□□□□ 0.31
TTC28-204ENST00000468807 EDARADDQ8WWZ3 215 aa16.98■□□□□ 0.31
TTC28-204ENST00000468807 CMSS1Q9BQ75 279 aaKnown RBP16.98■□□□□ 0.31
TTC28-204ENST00000468807 VCX3BQ9H321 246 aa16.98■□□□□ 0.31
TTC28-204ENST00000468807 RNF150Q9ULK6 438 aa16.98■□□□□ 0.31
TTC28-204ENST00000468807 HSF4Q9ULV5 492 aa16.98■□□□□ 0.31
TTC28-204ENST00000468807 MGAT4AQ9UM21 535 aa16.98■□□□□ 0.31
TTC28-204ENST00000468807 VSIG4Q9Y279 399 aa16.98■□□□□ 0.31
TTC28-204ENST00000468807 TRBV6-6A0A0A6YYG2 114 aa16.97■□□□□ 0.31
TTC28-204ENST00000468807 RAMP3O60896 148 aa16.97■□□□□ 0.31
TTC28-204ENST00000468807 NDUFA3O95167 84 aa16.97■□□□□ 0.31
TTC28-204ENST00000468807 ECI1P42126 302 aa16.97■□□□□ 0.31
TTC28-204ENST00000468807 DCTN2Q13561 401 aaKnown RBP16.97■□□□□ 0.31
TTC28-204ENST00000468807 HES5Q5TA89 166 aa16.97■□□□□ 0.31
TTC28-204ENST00000468807 DRAXINQ8NBI3 349 aaPredicted RBP16.97■□□□□ 0.31
TTC28-204ENST00000468807 OR1N2Q8NGR9 330 aa16.97■□□□□ 0.31
TTC28-204ENST00000468807 FAM3DQ96BQ1 224 aa16.97■□□□□ 0.31
TTC28-204ENST00000468807 UBE2E2Q96LR5 201 aa16.97■□□□□ 0.31
TTC28-204ENST00000468807 CNBD2Q96M20 576 aa16.97■□□□□ 0.31
TTC28-204ENST00000468807 PECRQ9BY49 303 aa16.97■□□□□ 0.31
TTC28-204ENST00000468807 C11orf54Q9H0W9 315 aaPredicted RBP16.97■□□□□ 0.31
TTC28-204ENST00000468807 Q9N2K0 584 aa16.97■□□□□ 0.31
TTC28-204ENST00000468807 WASHC3Q9Y3C0 194 aa16.97■□□□□ 0.31
TTC28-204ENST00000468807 V9GY05 133 aa16.97■□□□□ 0.31
TTC28-204ENST00000468807 A0A1W2PN81 502 aa16.96■□□□□ 0.31
TTC28-204ENST00000468807 H0YJW9 148 aa16.96■□□□□ 0.31
TTC28-204ENST00000468807 RRHO14718 337 aa16.96■□□□□ 0.31
TTC28-204ENST00000468807 DENRO43583 198 aaKnown RBP16.96■□□□□ 0.31
TTC28-204ENST00000468807 MC5RP33032 325 aa16.96■□□□□ 0.31
TTC28-204ENST00000468807 CHRNA7P36544 502 aa16.96■□□□□ 0.31
TTC28-204ENST00000468807 TMEM50BP56557 158 aa16.96■□□□□ 0.31
TTC28-204ENST00000468807 MRPS15P82914 257 aaKnown RBP16.96■□□□□ 0.31
TTC28-204ENST00000468807 NDPQ00604 133 aa16.96■□□□□ 0.31
TTC28-204ENST00000468807 C2orf76Q3KRA6 126 aa16.96■□□□□ 0.31
TTC28-204ENST00000468807 ZNF260Q3ZCT1 412 aa16.96■□□□□ 0.31
TTC28-204ENST00000468807 IZUMO2Q6UXV1 221 aa16.96■□□□□ 0.31
TTC28-204ENST00000468807 ZNF491Q8N8L2 437 aa16.96■□□□□ 0.31
TTC28-204ENST00000468807 OR56B1Q8NGI3 324 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms