RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 ZNF16P17020 682 aaPredicted RBP16.96■□□□□ 0.3
TMEM53-207ENST00000468117 BTNL3Q6UXE8 466 aa16.96■□□□□ 0.3
TMEM53-207ENST00000468117 ZNF841Q6ZN19 808 aa16.96■□□□□ 0.3
TMEM53-207ENST00000468117 TMEM56Q96MV1 263 aa16.96■□□□□ 0.3
TMEM53-207ENST00000468117 GAL3ST2Q9H3Q3 398 aa16.96■□□□□ 0.3
TMEM53-207ENST00000468117 GSKIPQ9P0R6 139 aa16.96■□□□□ 0.3
TMEM53-207ENST00000468117 TMEM56-RWDD3S4R434 201 aa16.96■□□□□ 0.3
TMEM53-207ENST00000468117 FXYD6-FXYD2A0A087WZ82 144 aa16.95■□□□□ 0.3
TMEM53-207ENST00000468117 SLC31A2O15432 143 aa16.95■□□□□ 0.3
TMEM53-207ENST00000468117 CLDN1O95832 211 aa16.95■□□□□ 0.3
TMEM53-207ENST00000468117 SRPXP78539 464 aa16.95■□□□□ 0.3
TMEM53-207ENST00000468117 IAH1Q2TAA2 248 aaPredicted RBP16.95■□□□□ 0.3
TMEM53-207ENST00000468117 ZNF695Q8IW36 515 aa16.95■□□□□ 0.3
TMEM53-207ENST00000468117 FAM219AQ8IW50 185 aa16.95■□□□□ 0.3
TMEM53-207ENST00000468117 C2orf50Q96LR7 162 aa16.95■□□□□ 0.3
TMEM53-207ENST00000468117 SDHAF2Q9NX18 166 aa16.95■□□□□ 0.3
TMEM53-207ENST00000468117 ARHGAP32A7KAX9 2087 aa16.95■□□□□ 0.3
TMEM53-207ENST00000468117 TENM4Q6N022 2769 aa16.94■□□□□ 0.3
TMEM53-207ENST00000468117 A0A1W2PPE3 182 aa16.94■□□□□ 0.3
TMEM53-207ENST00000468117 OVOL3O00110 214 aa16.94■□□□□ 0.3
TMEM53-207ENST00000468117 EFNA4P52798 201 aa16.94■□□□□ 0.3
TMEM53-207ENST00000468117 TMEM33P57088 247 aa16.94■□□□□ 0.3
TMEM53-207ENST00000468117 CYCSP99999 105 aaKnown RBP16.94■□□□□ 0.3
TMEM53-207ENST00000468117 LGALSLQ3ZCW2 172 aaPredicted RBP16.94■□□□□ 0.3
TMEM53-207ENST00000468117 SELENOHQ8IZQ5 122 aaKnown RBP16.94■□□□□ 0.3
TMEM53-207ENST00000468117 ZBTB34Q8NCN2 500 aa16.94■□□□□ 0.3
TMEM53-207ENST00000468117 LPAR3Q9UBY5 353 aa16.94■□□□□ 0.3
TMEM53-207ENST00000468117 FGL1Q08830 312 aa16.94■□□□□ 0.3
TMEM53-207ENST00000468117 Q3ZCU0 254 aa16.94■□□□□ 0.3
TMEM53-207ENST00000468117 NARFLQ9H6Q4 476 aa16.94■□□□□ 0.3
TMEM53-207ENST00000468117 RPUSD1Q9UJJ7 312 aaKnown RBP16.94■□□□□ 0.3
TMEM53-207ENST00000468117 USP9YO00507 2555 aaPredicted RBP16.93■□□□□ 0.3
TMEM53-207ENST00000468117 WNT2P09544 360 aa16.93■□□□□ 0.3
TMEM53-207ENST00000468117 GPR12P47775 334 aa16.93■□□□□ 0.3
TMEM53-207ENST00000468117 RPL30P62888 115 aaKnown RBP16.93■□□□□ 0.3
TMEM53-207ENST00000468117 EIF4EBP1Q13541 118 aaPredicted RBP16.93■□□□□ 0.3
TMEM53-207ENST00000468117 TMEM155Q4W5P6 130 aa16.93■□□□□ 0.3
TMEM53-207ENST00000468117 CT45A1Q5HYN5 189 aa16.93■□□□□ 0.3
TMEM53-207ENST00000468117 CT45A3Q8NHU0 189 aa16.93■□□□□ 0.3
TMEM53-207ENST00000468117 ABHD14AQ9BUJ0 271 aa16.93■□□□□ 0.3
TMEM53-207ENST00000468117 IFI27L2Q9H2X8 130 aa16.93■□□□□ 0.3
TMEM53-207ENST00000468117 LIN7CQ9NUP9 197 aaKnown RBP16.93■□□□□ 0.3
TMEM53-207ENST00000468117 MIOXQ9UGB7 285 aa16.93■□□□□ 0.3
TMEM53-207ENST00000468117 ARPC5O15511 151 aa16.92■□□□□ 0.3
TMEM53-207ENST00000468117 MPC2O95563 127 aa16.92■□□□□ 0.3
TMEM53-207ENST00000468117 SERPINE2P07093 398 aa16.92■□□□□ 0.3
TMEM53-207ENST00000468117 GNG10P50151 68 aa16.92■□□□□ 0.3
TMEM53-207ENST00000468117 LINC00205P59089 165 aa16.92■□□□□ 0.3
TMEM53-207ENST00000468117 HEPN1Q6WQI6 88 aa16.92■□□□□ 0.3
TMEM53-207ENST00000468117 OR8B3Q8NGG8 313 aa16.92■□□□□ 0.3
TMEM53-207ENST00000468117 OR52M1Q8NGK5 317 aa16.92■□□□□ 0.3
TMEM53-207ENST00000468117 RBPMSQ93062 196 aaKnown RBP16.92■□□□□ 0.3
TMEM53-207ENST00000468117 OR8B2Q96RD0 313 aa16.92■□□□□ 0.3
TMEM53-207ENST00000468117 TMED3Q9Y3Q3 217 aa16.92■□□□□ 0.3
TMEM53-207ENST00000468117 VPS13CQ709C8 3753 aa16.92■□□□□ 0.3
TMEM53-207ENST00000468117 PROP1O75360 226 aa16.92■□□□□ 0.3
TMEM53-207ENST00000468117 PSMB6P28072 239 aa16.92■□□□□ 0.3
TMEM53-207ENST00000468117 MSMO1Q15800 293 aa16.92■□□□□ 0.3
TMEM53-207ENST00000468117 C11orf87Q6NUJ2 197 aa16.92■□□□□ 0.3
TMEM53-207ENST00000468117 NEIL1Q96FI4 390 aaPredicted RBP16.92■□□□□ 0.3
TMEM53-207ENST00000468117 CELSR2Q9HCU4 2923 aa16.92■□□□□ 0.3
TMEM53-207ENST00000468117 RNF212BA8MTL3 300 aa16.91■□□□□ 0.3
TMEM53-207ENST00000468117 B3GALNT1O75752 331 aa16.91■□□□□ 0.3
TMEM53-207ENST00000468117 SSTR2P30874 369 aa16.91■□□□□ 0.3
TMEM53-207ENST00000468117 GPR6P46095 362 aaPredicted RBP16.91■□□□□ 0.3
TMEM53-207ENST00000468117 IL15RAQ13261 267 aa16.91■□□□□ 0.3
TMEM53-207ENST00000468117 TMEM30BQ3MIR4 351 aa16.91■□□□□ 0.3
TMEM53-207ENST00000468117 OR2B11Q5JQS5 317 aa16.91■□□□□ 0.3
TMEM53-207ENST00000468117 SP5Q6BEB4 398 aaPredicted RBP16.91■□□□□ 0.3
TMEM53-207ENST00000468117 ZNF439Q8NDP4 499 aa16.91■□□□□ 0.3
TMEM53-207ENST00000468117 IGFBPL1Q8WX77 278 aa16.91■□□□□ 0.3
TMEM53-207ENST00000468117 TRBV23-1A0A0A0MS06 115 aa16.91■□□□□ 0.3
TMEM53-207ENST00000468117 HMSDA8MTL9 139 aa16.91■□□□□ 0.3
TMEM53-207ENST00000468117 CXCL2P19875 107 aa16.91■□□□□ 0.3
TMEM53-207ENST00000468117 ZNF585BQ52M93 769 aa16.91■□□□□ 0.3
TMEM53-207ENST00000468117 RPL39P5Q59GN2 51 aa16.91■□□□□ 0.3
TMEM53-207ENST00000468117 WDR25Q64LD2 544 aaPredicted RBP16.91■□□□□ 0.3
TMEM53-207ENST00000468117 OR10A7Q8NGE5 316 aa16.91■□□□□ 0.3
TMEM53-207ENST00000468117 FAM216AQ8WUB2 273 aa16.91■□□□□ 0.3
TMEM53-207ENST00000468117 CCL19Q99731 98 aa16.91■□□□□ 0.3
TMEM53-207ENST00000468117 LINC00473A8K010 186 aa16.9■□□□□ 0.3
TMEM53-207ENST00000468117 ITGB1BP1O14713 200 aa16.9■□□□□ 0.3
TMEM53-207ENST00000468117 RAB7AP51149 207 aa16.9■□□□□ 0.3
TMEM53-207ENST00000468117 DLX6P56179 175 aa16.9■□□□□ 0.3
TMEM53-207ENST00000468117 RAB32Q13637 225 aa16.9■□□□□ 0.3
TMEM53-207ENST00000468117 ZNF525Q8N782 197 aa16.9■□□□□ 0.3
TMEM53-207ENST00000468117 ZBTB8BQ8NAP8 495 aaPredicted RBP16.9■□□□□ 0.3
TMEM53-207ENST00000468117 TCTEX1D2Q8WW35 142 aa16.9■□□□□ 0.3
TMEM53-207ENST00000468117 MBD2Q9UBB5 411 aa16.9■□□□□ 0.3
TMEM53-207ENST00000468117 RAMP3O60896 148 aa16.89■□□□□ 0.29
TMEM53-207ENST00000468117 IGKV1-39P01597 117 aa16.89■□□□□ 0.29
TMEM53-207ENST00000468117 IGKV1D-39P04432 117 aa16.89■□□□□ 0.29
TMEM53-207ENST00000468117 COX6B1P14854 86 aa16.89■□□□□ 0.29
TMEM53-207ENST00000468117 IFITM2Q01629 132 aa16.89■□□□□ 0.29
TMEM53-207ENST00000468117 CATR1Q13166 79 aa16.89■□□□□ 0.29
TMEM53-207ENST00000468117 C1orf229Q6ZS94 237 aaPredicted RBP16.89■□□□□ 0.29
TMEM53-207ENST00000468117 ZNF546Q86UE3 836 aa16.89■□□□□ 0.29
TMEM53-207ENST00000468117 THAP6Q8TBB0 222 aa16.89■□□□□ 0.29
TMEM53-207ENST00000468117 IL22RA2Q969J5 263 aa16.89■□□□□ 0.29
TMEM53-207ENST00000468117 ZNRD1Q9P1U0 126 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms