RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 AIREO43918 545 aa11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 HIST1H1DP16402 221 aaKnown RBP11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 ZBTB25P24278 435 aa11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 TALDO1P37837 337 aa11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 OR3A3P47888 321 aa11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 ZNF137PP52743 207 aa11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 LSM3P62310 102 aaKnown RBP11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 TIMM50Q3ZCQ8 353 aa11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 CDNFQ49AH0 187 aa11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 LY6G6FQ5SQ64 297 aa11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 ODF3L1Q8IXM7 274 aa11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 OR4X2Q8NGF9 303 aa11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 PHF21AQ96BD5 680 aa11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 GPR61Q9BZJ8 451 aa11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 PARP12Q9H0J9 701 aaKnown RBP11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 OR1A1Q9P1Q5 309 aa11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 ZNF230Q9UIE0 474 aaPredicted RBP11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 ELF5Q9UKW6 265 aaPredicted RBP11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 MFNGO00587 321 aa11.14□□□□□ -0.63
CCHCR1-211ENST00000467553 MOSP00540 346 aa11.14□□□□□ -0.63
CCHCR1-211ENST00000467553 PF4V1P10720 104 aa11.14□□□□□ -0.63
CCHCR1-211ENST00000467553 TGFBR1P36897 503 aa11.14□□□□□ -0.63
CCHCR1-211ENST00000467553 IZUMO1Q8IYV9 350 aa11.14□□□□□ -0.63
CCHCR1-211ENST00000467553 C5orf56Q8N8D9 126 aa11.14□□□□□ -0.63
CCHCR1-211ENST00000467553 LGALS14Q8TCE9 139 aa11.14□□□□□ -0.63
CCHCR1-211ENST00000467553 MAFIPQ8WZ33 124 aa11.14□□□□□ -0.63
CCHCR1-211ENST00000467553 YIPF6Q96EC8 236 aa11.14□□□□□ -0.63
CCHCR1-211ENST00000467553 RCC1LQ96I51 464 aaKnown RBP11.14□□□□□ -0.63
CCHCR1-211ENST00000467553 ABHD14BQ96IU4 210 aa11.14□□□□□ -0.63
CCHCR1-211ENST00000467553 C11orf54Q9H0W9 315 aaPredicted RBP11.14□□□□□ -0.63
CCHCR1-211ENST00000467553 PIPOXQ9P0Z9 390 aa11.14□□□□□ -0.63
CCHCR1-211ENST00000467553 RNF150Q9ULK6 438 aa11.14□□□□□ -0.63
CCHCR1-211ENST00000467553 SAA2-SAA4A0A096LPE2 208 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 IGKV1-6A0A0C4DH72 117 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 TCRBV4S1A1TA0A5B7 111 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 SERPINE3A8MV23 424 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 RAB29O14966 203 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 BET1O15155 118 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 FGF16O43320 207 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 FCGR3AP08637 254 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 GSTT2P0CG29 244 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 GSTT2BP0CG30 244 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 SAA2P0DJI9 122 aaPredicted RBP11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 LSAMPQ13449 338 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 ARL6IP1Q15041 203 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 RPL39P5Q59GN2 51 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 ZNF833PQ6ZTB9 187 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 OR4A4PQ8NGN8 299 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 OR5H6Q8NGV6 325 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 EDARADDQ8WWZ3 215 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 S1PR3Q99500 378 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 NABP2Q9BQ15 211 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 MRPL20Q9BYC9 149 aaKnown RBP11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 IFI27L2Q9H2X8 130 aa11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 AURKAIP1Q9NWT8 199 aaPredicted RBP11.13□□□□□ -0.63
CCHCR1-211ENST00000467553 FABP7O15540 132 aa11.12□□□□□ -0.63
CCHCR1-211ENST00000467553 PF4P02776 101 aa11.12□□□□□ -0.63
CCHCR1-211ENST00000467553 SLC6A1P30531 599 aa11.12□□□□□ -0.63
CCHCR1-211ENST00000467553 F2RL1P55085 397 aa11.12□□□□□ -0.63
CCHCR1-211ENST00000467553 KIR2DS1Q14954 304 aa11.12□□□□□ -0.63
CCHCR1-211ENST00000467553 IGSF11Q5DX21 431 aa11.12□□□□□ -0.63
CCHCR1-211ENST00000467553 FOXB2Q5VYV0 432 aa11.12□□□□□ -0.63
CCHCR1-211ENST00000467553 Q8N6K4 173 aa11.12□□□□□ -0.63
CCHCR1-211ENST00000467553 RASL11BQ9BPW5 248 aa11.12□□□□□ -0.63
CCHCR1-211ENST00000467553 ST6GALNAC5Q9BVH7 336 aa11.12□□□□□ -0.63
CCHCR1-211ENST00000467553 PLSCR3Q9NRY6 295 aa11.12□□□□□ -0.63
CCHCR1-211ENST00000467553 RHBDL2Q9NX52 303 aa11.12□□□□□ -0.63
CCHCR1-211ENST00000467553 LINC00527Q9UJ94 153 aa11.12□□□□□ -0.63
CCHCR1-211ENST00000467553 TRIM64CA6NLI5 447 aa11.11□□□□□ -0.63
CCHCR1-211ENST00000467553 ITGB1BP1O14713 200 aa11.11□□□□□ -0.63
CCHCR1-211ENST00000467553 SCGNO76038 276 aa11.11□□□□□ -0.63
CCHCR1-211ENST00000467553 PRB2P02812 416 aaPredicted RBP11.11□□□□□ -0.63
CCHCR1-211ENST00000467553 RPS19P39019 145 aaKnown RBP11.11□□□□□ -0.63
CCHCR1-211ENST00000467553 SLC35E3Q7Z769 313 aa11.11□□□□□ -0.63
CCHCR1-211ENST00000467553 Q8N9W7 124 aa11.11□□□□□ -0.63
CCHCR1-211ENST00000467553 OR10J5Q8NHC4 309 aa11.11□□□□□ -0.63
CCHCR1-211ENST00000467553 NOL4LQ96MY1 436 aaPredicted RBP11.11□□□□□ -0.63
CCHCR1-211ENST00000467553 ZNF251Q9BRH9 671 aa11.11□□□□□ -0.63
CCHCR1-211ENST00000467553 AGMATQ9BSE5 352 aa11.11□□□□□ -0.63
CCHCR1-211ENST00000467553 GHITMQ9H3K2 345 aa11.11□□□□□ -0.63
CCHCR1-211ENST00000467553 RDH8Q9NYR8 311 aa11.11□□□□□ -0.63
CCHCR1-211ENST00000467553 ZNF221Q9UK13 617 aa11.11□□□□□ -0.63
CCHCR1-211ENST00000467553 TRAV18A0A075B6X5 111 aa11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 A0A1W2PRX2 142 aa11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 TMEM235A6NFC5 223 aa11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 LINC01548A6NM66 108 aa11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 GSTP1P09211 210 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 CT45A6P0DMU7 189 aa11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 CT45A5P0DMU8 189 aa11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 CT45A7P0DMV0 189 aa11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 SERPINB10P48595 397 aa11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 GNG2P59768 71 aa11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 ZNF260Q3ZCT1 412 aa11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 HACD4Q5VWC8 232 aa11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 C10orf99Q6UWK7 81 aa11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 GLDNQ6ZMI3 551 aaPredicted RBP11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 ZNF329Q86UD4 541 aa11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 OR8H1Q8NGG4 311 aa11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 NUDCD2Q8WVJ2 157 aa11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 RITA1Q96K30 269 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms