RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 IGHV3-53P01767 116 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 REG1AP05451 166 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 CRYBA1P05813 215 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 PFN1P07737 140 aaKnown RBP1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 OR12D1P0DN82 309 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 CD36P16671 472 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 ZNF708P17019 499 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 PRPS1L1P21108 318 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 CRABP2P29373 138 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 HOXA6P31267 233 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 GABRA3P34903 492 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 HSPA9P38646 679 aaKnown RBP1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 REG1BP48304 166 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 AKR1C2P52895 323 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 TCL1AP56279 114 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 KLF3P57682 345 aaPredicted RBP1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 FABP5Q01469 135 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 DEFA6Q01524 100 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 TMEM267Q0VDI3 215 aaPredicted RBP1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 TSPAN31Q12999 210 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 STX5Q13190 355 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 BIKQ13323 160 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 JOSD1Q15040 202 aaPredicted RBP1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 PDK2Q15119 407 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 EBPQ15125 230 aaKnown RBP1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 PDGFRLQ15198 375 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 UAP1Q16222 522 aaPredicted RBP1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 SPIN3Q5JUX0 258 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 N4BP2L1Q5TBK1 243 aaPredicted RBP1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 C1orf195Q5TG92 126 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 ZNF660Q6AZW8 331 aaPredicted RBP1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 ZFAND6Q6FIF0 208 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 C8orf74Q6P047 294 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 Q6ZQT7 251 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 TMEM136Q6ZRR5 245 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 ADM2Q7Z4H4 148 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 LYZL2Q7Z4W2 148 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 SLC51BQ86UW2 128 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 GID4Q8IVV7 300 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 LRRC34Q8IZ02 419 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 TMEM161BQ8NDZ6 487 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 CCDC112Q8NEF3 446 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 ZNF680Q8NEM1 530 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 BPIFB6Q8NFQ5 453 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 OR11G2Q8NGC1 345 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 OR8K1Q8NGG5 319 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 MFSD8Q8NHS3 518 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 CDC26Q8NHZ8 85 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 CCDC42Q96M95 316 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 OR52B2Q96RD2 323 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 STACQ99469 402 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 B9D2Q9BPU9 175 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 MED28Q9H204 178 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 OR51V1Q9H2C8 321 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 TRIM45Q9H8W5 580 aaPredicted RBP1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 HES4Q9HCC6 221 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 XPNPEP1Q9NQW7 623 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 RPUSD1Q9UJJ7 312 aaKnown RBP1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 DKKL1Q9UK85 242 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 DNAJC12Q9UKB3 198 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 POLR1DQ9Y2S0 133 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 WASHC3Q9Y3C0 194 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 FIS1Q9Y3D6 152 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 PHLDA3Q9Y5J5 127 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 U3KQK5 164 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 LTBP4Q8N2S1 1624 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 LOXHD1Q8IVV2 1947 aa1.07□□□□□ -2.24
GTF3C3-209ENST00000466862 NPATQ14207 1427 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 BAZ1BQ9UIG0 1483 aaKnown RBP1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 TGIF2-C20orf24A0A0A6YYL0 155 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 IGKV1-12A0A0C4DH73 117 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 A0A1W2PQL4 384 aaPredicted RBP1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 EVPLLA8MZ36 301 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 TMEM114B3SHH9 223 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 C4orf51C9J302 202 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 D6RAR5 112 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 KCNK1O00180 336 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 DENRO43583 198 aaKnown RBP1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 SH2D1AO60880 128 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 DEDDO75618 318 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 RPP14O95059 124 aaKnown RBP1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 IGKV1D-12P01611 117 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 HIST1H1EP10412 219 aaKnown RBP1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 NEFHP12036 1026 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 CDK2P24941 298 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 DDTP30046 118 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 CCR7P32248 378 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 SLCO1A2P46721 670 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 RAP1GDS1P52306 607 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 LINC00313P59037 77 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 SNAP25P60880 206 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 LSM6P62312 80 aaKnown RBP1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 HERVK_113P63121 156 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 HLA-DRB3P79483 266 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 BSPH1Q075Z2 132 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 APOFQ13790 326 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 RSU1Q15404 277 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 LRRC75BQ2VPJ9 315 aa1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 TMEM176BQ3YBM2 270 aaPredicted RBP1.06□□□□□ -2.24
GTF3C3-209ENST00000466862 ACSBG2Q5FVE4 666 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms