RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 PPP1R17O96001 155 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 CD74P04233 296 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 NAT2P11245 290 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 IER3P46695 156 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 SUCLG1P53597 346 aaKnown RBP7.56□□□□□ -1.2
HPS4-209ENST00000466781 PSG6Q00889 435 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 OR5AU1Q8NGC0 362 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 RAB33BQ9H082 229 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 IDI2-AS1Q9NZ38 188 aa7.56□□□□□ -1.2
HPS4-209ENST00000466781 LOC102724200A0A096LPH7 203 aaPredicted RBP7.55□□□□□ -1.2
HPS4-209ENST00000466781 IGKV3OR2-268A0A0C4DH90 116 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 SNURFLB1AK76 121 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 CTDSPLO15194 276 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 NDUFA2O43678 99 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 FGF5P12034 268 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 ZNF645Q8N7E2 425 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 ZNF501Q96CX3 271 aaPredicted RBP7.55□□□□□ -1.2
HPS4-209ENST00000466781 ELOVL1Q9BW60 279 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 RAXQ9Y2V3 346 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 SCN10AQ9Y5Y9 1956 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 CDRT15L2A8MXV6 281 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 H7C2G1 150 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 THY1P04216 161 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 NMUP48645 174 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 MFAP4P55083 255 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 RAG2P55895 527 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 RBM11P57052 281 aaKnown RBP7.55□□□□□ -1.2
HPS4-209ENST00000466781 DLK1P80370 383 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 DPPA3Q6W0C5 159 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 OR8D4Q8NGM9 314 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 EEF1AKMT3Q96AZ1 226 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 ZNF488Q96MN9 340 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 LNP1A1A4G5 178 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 OGG1O15527 345 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 ZNF883P0CG24 379 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 RELQ04864 619 aaPredicted RBP7.55□□□□□ -1.2
HPS4-209ENST00000466781 OR8G5Q8NG78 346 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 MRPL24Q96A35 216 aaKnown RBP7.55□□□□□ -1.2
HPS4-209ENST00000466781 PLAC1Q9HBJ0 212 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 PHLDA3Q9Y5J5 127 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 PPIAL4CA0A0B4J2A2 164 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 CTXND1A0A1B0GTU2 59 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 TMEM218A2RU14 115 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 FXYD1O00168 92 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 NUDT3O95989 172 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 CYB5R3P00387 301 aaPredicted RBP7.55□□□□□ -1.2
HPS4-209ENST00000466781 PPIAL4GP0DN37 164 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 CX3CL1P78423 397 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 KIAA0040Q15053 153 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 CTF1Q16619 201 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 SLC25A53Q5H9E4 307 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 DMKNQ6E0U4 476 aaPredicted RBP7.55□□□□□ -1.2
HPS4-209ENST00000466781 WDFY1Q8IWB7 410 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 FAM216AQ8WUB2 273 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 RTN4RQ9BZR6 473 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 TRAV30A0A087WSZ9 112 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 PRR19A6NJB7 356 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 TMEM229AB2RXF0 380 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 PITX3O75364 302 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 PLPPR5Q32ZL2 321 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 CEACAM21Q3KPI0 293 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 FAM181AQ8N9Y4 354 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 RAB24Q969Q5 203 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 CDC42EP3Q9UKI2 254 aa7.55□□□□□ -1.2
HPS4-209ENST00000466781 RALGAPA2Q2PPJ7 1873 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 HBZP02008 142 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 LGALS3P17931 250 aaKnown RBP7.54□□□□□ -1.2
HPS4-209ENST00000466781 SNRPD3P62318 126 aaKnown RBP7.54□□□□□ -1.2
HPS4-209ENST00000466781 MRGPRGQ86SM5 289 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 WNT2BQ93097 391 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 TMEM204Q9BSN7 226 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 OR2A4O95047 310 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 SNRPEP62304 92 aaKnown RBP7.54□□□□□ -1.2
HPS4-209ENST00000466781 CIRBPQ14011 172 aaKnown RBP7.54□□□□□ -1.2
HPS4-209ENST00000466781 MEIG1Q5JSS6 88 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 SEZ6L2Q6UXD5 910 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 OVCH2Q7RTZ1 564 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 SCMH1Q96GD3 660 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 ZNF385AQ96PM9 386 aaKnown RBP7.54□□□□□ -1.2
HPS4-209ENST00000466781 OR2A7Q96R45 310 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 IL19Q9UHD0 177 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 HMSDA8MTL9 139 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 MMD2Q8IY49 270 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 RCC2Q9P258 522 aaKnown RBP7.54□□□□□ -1.2
HPS4-209ENST00000466781 IGHV3OR16-10A0A075B7F0 116 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 A0A1W2PPV9 198 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 GREM1O60565 184 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 FOXH1O75593 365 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 DLX6P56179 175 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 FAM209AQ5JX71 171 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 DCAF12L2Q5VW00 463 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 HCP5Q6MZN7 132 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 GALNT14Q96FL9 552 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 NPVFQ9HCQ7 196 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 ZNF107Q9UII5 783 aaPredicted RBP7.54□□□□□ -1.2
HPS4-209ENST00000466781 FUT9Q9Y231 359 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 UPK3AO75631 287 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 PRSS2P07478 247 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 CELA2AP08217 269 aa7.54□□□□□ -1.2
HPS4-209ENST00000466781 ADAD2Q8NCV1 583 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms