RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 NKX2-6A6NCS4 301 aa13.23□□□□□ -0.29
ABCF3-206ENST00000466742 SSSCA1O60232 199 aa13.23□□□□□ -0.29
ABCF3-206ENST00000466742 NPIPB7O75200 414 aa13.23□□□□□ -0.29
ABCF3-206ENST00000466742 HLA-HP01893 362 aa13.23□□□□□ -0.29
ABCF3-206ENST00000466742 GYPAP02724 150 aa13.23□□□□□ -0.29
ABCF3-206ENST00000466742 PSG1P11464 419 aa13.23□□□□□ -0.29
ABCF3-206ENST00000466742 LHX2P50458 406 aa13.23□□□□□ -0.29
ABCF3-206ENST00000466742 RPL27P61353 136 aaKnown RBP13.23□□□□□ -0.29
ABCF3-206ENST00000466742 MRPS34P82930 218 aaKnown RBP13.23□□□□□ -0.29
ABCF3-206ENST00000466742 SMIM21Q3B7S5 101 aa13.23□□□□□ -0.29
ABCF3-206ENST00000466742 TMEM217Q8N7C4 229 aa13.23□□□□□ -0.29
ABCF3-206ENST00000466742 OR5D18Q8NGL1 313 aa13.23□□□□□ -0.29
ABCF3-206ENST00000466742 ANXA10Q9UJ72 324 aa13.23□□□□□ -0.29
ABCF3-206ENST00000466742 TRAV36DV7A0A075B6V5 113 aa13.22□□□□□ -0.29
ABCF3-206ENST00000466742 TMED7-TICAM2A0A0A6YYA0 188 aa13.22□□□□□ -0.29
ABCF3-206ENST00000466742 A0A1W2PNV4 684 aa13.22□□□□□ -0.29
ABCF3-206ENST00000466742 GRIFINA4D1Z8 144 aa13.22□□□□□ -0.29
ABCF3-206ENST00000466742 AQP7P3A6NL99 342 aa13.22□□□□□ -0.29
ABCF3-206ENST00000466742 CD99P14209 185 aa13.22□□□□□ -0.29
ABCF3-206ENST00000466742 RPS18P62269 152 aaKnown RBP13.22□□□□□ -0.29
ABCF3-206ENST00000466742 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.22□□□□□ -0.29
ABCF3-206ENST00000466742 METTL7AQ9H8H3 244 aa13.22□□□□□ -0.29
ABCF3-206ENST00000466742 ELOVL5Q9NYP7 299 aa13.22□□□□□ -0.29
ABCF3-206ENST00000466742 C21orf140B9A014 251 aa13.22□□□□□ -0.29
ABCF3-206ENST00000466742 MPZL1O95297 269 aa13.22□□□□□ -0.29
ABCF3-206ENST00000466742 IFNA5P01569 189 aa13.22□□□□□ -0.29
ABCF3-206ENST00000466742 PPP1CBP62140 327 aa13.22□□□□□ -0.29
ABCF3-206ENST00000466742 NHLH1Q02575 133 aa13.22□□□□□ -0.29
ABCF3-206ENST00000466742 ZNF154Q13106 437 aa13.22□□□□□ -0.29
ABCF3-206ENST00000466742 TCF24Q7RTU0 167 aa13.22□□□□□ -0.29
ABCF3-206ENST00000466742 TCTEX1D1Q8N7M0 179 aa13.22□□□□□ -0.29
ABCF3-206ENST00000466742 PSMF1Q92530 271 aa13.22□□□□□ -0.29
ABCF3-206ENST00000466742 FAM71F1Q96KD3 344 aaPredicted RBP13.22□□□□□ -0.29
ABCF3-206ENST00000466742 VSIRQ9H7M9 311 aa13.22□□□□□ -0.29
ABCF3-206ENST00000466742 CHCHD2Q9Y6H1 151 aaPredicted RBP13.22□□□□□ -0.29
ABCF3-206ENST00000466742 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.21□□□□□ -0.29
ABCF3-206ENST00000466742 C2orf72A6NCS6 295 aa13.21□□□□□ -0.29
ABCF3-206ENST00000466742 TMEM50AO95807 157 aa13.21□□□□□ -0.29
ABCF3-206ENST00000466742 MT-ATP6P00846 226 aa13.21□□□□□ -0.29
ABCF3-206ENST00000466742 WNT2P09544 360 aa13.21□□□□□ -0.29
ABCF3-206ENST00000466742 ZNF20P17024 532 aa13.21□□□□□ -0.29
ABCF3-206ENST00000466742 OTX2P32243 289 aa13.21□□□□□ -0.29
ABCF3-206ENST00000466742 NPBWR2P48146 333 aa13.21□□□□□ -0.29
ABCF3-206ENST00000466742 ACKR1Q16570 336 aa13.21□□□□□ -0.29
ABCF3-206ENST00000466742 FFAR4Q5NUL3 377 aa13.21□□□□□ -0.29
ABCF3-206ENST00000466742 CFAP161Q6P656 301 aa13.21□□□□□ -0.29
ABCF3-206ENST00000466742 RPS19BP1Q86WX3 136 aaKnown RBP13.21□□□□□ -0.29
ABCF3-206ENST00000466742 PBOV1Q9GZY1 135 aa13.21□□□□□ -0.29
ABCF3-206ENST00000466742 MCTS1Q9ULC4 181 aaKnown RBP13.21□□□□□ -0.29
ABCF3-206ENST00000466742 COA3Q9Y2R0 106 aaPredicted RBP13.21□□□□□ -0.29
ABCF3-206ENST00000466742 RNF114Q9Y508 228 aa13.21□□□□□ -0.29
ABCF3-206ENST00000466742 C11orf98E9PRG8 122 aa13.21□□□□□ -0.3
ABCF3-206ENST00000466742 WISP1O95388 367 aa13.21□□□□□ -0.3
ABCF3-206ENST00000466742 MLF1P58340 268 aa13.21□□□□□ -0.3
ABCF3-206ENST00000466742 Q0VG73 95 aa13.21□□□□□ -0.3
ABCF3-206ENST00000466742 PLPPR5Q32ZL2 321 aa13.21□□□□□ -0.3
ABCF3-206ENST00000466742 LRRC10Q5BKY1 277 aa13.21□□□□□ -0.3
ABCF3-206ENST00000466742 SSC4DQ8WTU2 575 aa13.21□□□□□ -0.3
ABCF3-206ENST00000466742 SPIN2AQ99865 258 aa13.21□□□□□ -0.3
ABCF3-206ENST00000466742 SPIN2BQ9BPZ2 258 aa13.21□□□□□ -0.3
ABCF3-206ENST00000466742 PSMG3Q9BT73 122 aaPredicted RBP13.21□□□□□ -0.3
ABCF3-206ENST00000466742 SAMD10Q9BYL1 202 aa13.21□□□□□ -0.3
ABCF3-206ENST00000466742 ZNF586Q9NXT0 402 aa13.21□□□□□ -0.3
ABCF3-206ENST00000466742 CORTO00230 105 aa13.2□□□□□ -0.3
ABCF3-206ENST00000466742 PHF1O43189 567 aaPredicted RBP13.2□□□□□ -0.3
ABCF3-206ENST00000466742 GLI4P10075 376 aa13.2□□□□□ -0.3
ABCF3-206ENST00000466742 ZNF823P16415 610 aa13.2□□□□□ -0.3
ABCF3-206ENST00000466742 NBL1P41271 181 aa13.2□□□□□ -0.3
ABCF3-206ENST00000466742 SSR4P51571 173 aa13.2□□□□□ -0.3
ABCF3-206ENST00000466742 PHLDA2Q53GA4 152 aa13.2□□□□□ -0.3
ABCF3-206ENST00000466742 NIT1Q86X76 327 aa13.2□□□□□ -0.3
ABCF3-206ENST00000466742 ZIC4Q8N9L1 334 aa13.2□□□□□ -0.3
ABCF3-206ENST00000466742 DEFB124Q8NES8 71 aa13.2□□□□□ -0.3
ABCF3-206ENST00000466742 PINX1Q96BK5 328 aaKnown RBP13.2□□□□□ -0.3
ABCF3-206ENST00000466742 TM2D1Q9BX74 207 aa13.2□□□□□ -0.3
ABCF3-206ENST00000466742 MEGF9Q9H1U4 602 aa13.2□□□□□ -0.3
ABCF3-206ENST00000466742 NECAP2Q9NVZ3 263 aa13.2□□□□□ -0.3
ABCF3-206ENST00000466742 TRAV34A0A0B4J273 112 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 TNFSF15O95150 251 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 SERPINA7P05543 415 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 GPX1P07203 203 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 CRISP2P16562 243 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 MDH2P40926 338 aaKnown RBP13.19□□□□□ -0.3
ABCF3-206ENST00000466742 SRPXP78539 464 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 ID3Q02535 119 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 SLC25A53Q5H9E4 307 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 SIGLECL1Q8N7X8 197 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 MRPL30Q8TCC3 161 aaKnown RBP13.19□□□□□ -0.3
ABCF3-206ENST00000466742 RNF133Q8WVZ7 376 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 UHRF2Q96PU4 802 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 TXNIPQ9H3M7 391 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 ZDHHC11Q9H8X9 412 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 VDAC3Q9Y277 283 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 CFAP54Q96N23 3096 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 MLNRO43193 412 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 KRTDAPP60985 99 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 SERF2P84101 59 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 ZP4Q12836 540 aa13.19□□□□□ -0.3
ABCF3-206ENST00000466742 CXorf66Q5JRM2 361 aaPredicted RBP13.19□□□□□ -0.3
ABCF3-206ENST00000466742 OR4S2Q8NH73 311 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms