RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 NBR2O15453 112 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 FGF16O43320 207 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 ERI3O43414 337 aaKnown RBP2.59□□□□□ -1.99
VPS13D-203ENST00000466732 HIST1H2BKO60814 126 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 SERF1AO75920 110 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 MPZL1O95297 269 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 HBZP02008 142 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 ALDOBP05062 364 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 HIST1H2BJP06899 126 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 RHOCP08134 193 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 CD14P08571 375 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 C8orf88P0DMB2 117 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 HIST1H2BOP23527 126 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 GADD45AP24522 165 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 RPS12P25398 132 aaKnown RBP2.59□□□□□ -1.99
VPS13D-203ENST00000466732 HIST1H2BBP33778 126 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 TGFBR1P36897 503 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 OPRD1P41143 372 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 RPS10P46783 165 aaKnown RBP2.59□□□□□ -1.99
VPS13D-203ENST00000466732 INPP1P49441 399 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 ZNF140P52738 457 aaPredicted RBP2.59□□□□□ -1.99
VPS13D-203ENST00000466732 HIST1H2BDP58876 126 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 RHOAP61586 193 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 HIST1H2BCP62807 126 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 CDK5Q00535 292 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 SMAGPQ0VAQ4 97 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 EIF2B1Q14232 305 aaKnown RBP2.59□□□□□ -1.99
VPS13D-203ENST00000466732 UBE2V2Q15819 145 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 BATFQ16520 125 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 HIST2H2BEQ16778 126 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 IAH1Q2TAA2 248 aaPredicted RBP2.59□□□□□ -1.99
VPS13D-203ENST00000466732 PYDC2Q56P42 97 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 C6orf226Q5I0X4 101 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 COA6Q5JTJ3 125 aaKnown RBP2.59□□□□□ -1.99
VPS13D-203ENST00000466732 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.59□□□□□ -1.99
VPS13D-203ENST00000466732 TMEM78Q5T7P6 136 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 IGFL2Q6UWQ7 119 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 TOMM20LQ6UXN7 152 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 TSEN54Q7Z6J9 526 aaKnown RBP2.59□□□□□ -1.99
VPS13D-203ENST00000466732 TMEM183AQ8IXX5 376 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 C14orf178Q8N769 122 aaPredicted RBP2.59□□□□□ -1.99
VPS13D-203ENST00000466732 PRELID2Q8N945 189 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 C8orf31Q8N9H6 132 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 OR10G4Q8NGN3 311 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 OR4A4PQ8NGN8 299 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 OR1S2Q8NGQ3 325 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 OR1J4Q8NGS1 313 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 OR5W2Q8NH69 310 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 OR56B4Q8NH76 319 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 OR2AE1Q8NHA4 323 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 OR5K2Q8NHB8 316 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 KIR2DL5BQ8NHK3 375 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 LYPD6BQ8NI32 183 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 HAVCR2Q8TDQ0 301 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 ZNF418Q8TF45 676 aaPredicted RBP2.59□□□□□ -1.99
VPS13D-203ENST00000466732 PIGCQ92535 297 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 HIST1H2ACQ93077 130 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 HIST1H2BHQ93079 126 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 PTX4Q96A99 478 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 BTF3L4Q96K17 158 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 HIST1H2BNQ99877 126 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 HIST1H2BMQ99879 126 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 C19orf24Q9BVV8 132 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 TAPBPLQ9BX59 468 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 DUSP16Q9BY84 665 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 C20orf27Q9GZN8 174 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 ARL6Q9H0F7 186 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 LPAR5Q9H1C0 372 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 OR51E2Q9H255 320 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 RBKSQ9H477 322 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 CWH43Q9H720 699 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 ZNF702PQ9H963 129 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 ACOT13Q9NPJ3 140 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 MMP26Q9NRE1 261 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 DMAC2Q9NW81 257 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 MARCH5Q9NX47 278 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 BET1LQ9NYM9 111 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 SLC2A6Q9UGQ3 507 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 VAX2Q9UIW0 290 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 SIGLEC9Q9Y336 463 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 TIMM10BQ9Y5J6 103 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 ORC6Q9Y5N6 252 aa2.59□□□□□ -1.99
VPS13D-203ENST00000466732 NUP188Q5SRE5 1749 aa2.59□□□□□ -2
VPS13D-203ENST00000466732 NWD2Q9ULI1 1742 aa2.59□□□□□ -2
VPS13D-203ENST00000466732 SCN8AQ9UQD0 1980 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 LRP6O75581 1613 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 A0A087WX48 190 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 LOC102724200A0A096LPH7 203 aaPredicted RBP2.58□□□□□ -2
VPS13D-203ENST00000466732 TRAV38-1A0A0B4J264 116 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 A0A1W2PRS3 328 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 DHRS12A0PJE2 317 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 C7orf77A4D0Y5 90 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 FAM231BA6NCW3 169 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 FTCDNL1E5RQL4 147 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 C11orf98E9PRG8 122 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 TNFRSF11BO00300 401 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 SDHDO14521 159 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 HSD17B6O14756 317 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 DEGS1O15121 323 aa2.58□□□□□ -2
VPS13D-203ENST00000466732 ENTPD6O75354 484 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms