RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 TFPI2P48307 235 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 ERFP50548 548 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 HNRNPA3P51991 378 aaKnown RBP3.2□□□□□ -1.9
UBR4-209ENST00000465036 ERVK-16P61578 105 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 PITPNAQ00169 270 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 TGFBR3Q03167 851 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 PRKCDQ05655 676 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 HIST3H3Q16695 136 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 ATP6V1FQ16864 119 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 OR2G6Q5TZ20 316 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 MEDAGQ5VYS4 303 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 ZNF57Q68EA5 555 aaPredicted RBP3.2□□□□□ -1.9
UBR4-209ENST00000465036 ZCCHC24Q8N2G6 241 aaKnown RBP3.2□□□□□ -1.9
UBR4-209ENST00000465036 OR2G2Q8NGZ5 317 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 OR51F2Q8NH61 342 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 OR6X1Q8NH79 312 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 ZNF502Q8TBZ5 544 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 GEMIN6Q8WXD5 167 aaKnown RBP3.2□□□□□ -1.9
UBR4-209ENST00000465036 LZICQ8WZA0 190 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 PPP1R14BQ96C90 147 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 SLC25A44Q96H78 314 aaPredicted RBP3.2□□□□□ -1.9
UBR4-209ENST00000465036 TMEM80Q96HE8 168 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 SH3GL3Q99963 347 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 DHRS9Q9BPW9 319 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 POLR2J2Q9GZM3 115 aaKnown RBP3.2□□□□□ -1.9
UBR4-209ENST00000465036 POLR2J3Q9H1A7 115 aaKnown RBP3.2□□□□□ -1.9
UBR4-209ENST00000465036 NMNAT1Q9HAN9 279 aaPredicted RBP3.2□□□□□ -1.9
UBR4-209ENST00000465036 INIPQ9NRY2 104 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 VNN3Q9NY84 501 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 THYN1Q9P016 225 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 AP3M1Q9Y2T2 418 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 UGT2A1Q9Y4X1 527 aa3.2□□□□□ -1.9
UBR4-209ENST00000465036 FN1P02751 2386 aaKnown RBP3.19□□□□□ -1.9
UBR4-209ENST00000465036 IGHV4-30-2A0A087WSY4 118 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 IGHV2OR16-5A0A0B4J2B6 119 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 A0A1B0GTI1 187 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 A0A1B0GW55 424 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 A0A1W2PRG6 482 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 EFCAB9A8MZ26 197 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 H3BN98 237 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 M0QXV9 152 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 DCTN6O00399 190 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 MPDU1O75352 247 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 RBBP9O75884 186 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 TNFAIP8O95379 198 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 IGF2P01344 180 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 IGHV2-5P01817 119 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 IGHG1P01857 330 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 IGHMP01871 453 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 HBE1P02100 147 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 FABP3P05413 133 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 OR4A8P0C604 315 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 ACSM4P0C7M7 580 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 DUX4L2P0CJ85 424 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 DUX4L3P0CJ86 424 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 DUX4L5P0CJ88 424 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 DUX4L6P0CJ89 424 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 DUX4L7P0CJ90 424 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 CBR1P16152 277 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 ZNF14P17017 642 aaPredicted RBP3.19□□□□□ -1.9
UBR4-209ENST00000465036 ARR3P36575 388 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 RBMXP38159 391 aaKnown RBP3.19□□□□□ -1.9
UBR4-209ENST00000465036 FABP6P51161 128 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 ZNF133P52736 654 aaPredicted RBP3.19□□□□□ -1.9
UBR4-209ENST00000465036 UBE2NP61088 152 aaKnown RBP3.19□□□□□ -1.9
UBR4-209ENST00000465036 ERVS71-1P61550 626 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 KIAA0141Q14154 515 aaPredicted RBP3.19□□□□□ -1.9
UBR4-209ENST00000465036 MAD2L1BPQ15013 274 aaPredicted RBP3.19□□□□□ -1.9
UBR4-209ENST00000465036 CLEC12BQ2HXU8 276 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 ZBED5Q49AG3 693 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 MESTQ5EB52 335 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 TMEM255AQ5JRV8 349 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 FAHD1Q6P587 224 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 DUX4L9Q6RFH8 374 aaPredicted RBP3.19□□□□□ -1.9
UBR4-209ENST00000465036 DNM1P46Q6ZS02 220 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 MBOAT2Q6ZWT7 520 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 OAFQ86UD1 273 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 LRP11Q86VZ4 500 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 MUC15Q8N387 334 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 LRRC18Q8N456 261 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 SLC22A24Q8N4F4 322 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 ZNF525Q8N782 197 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 OR4K5Q8NGD3 323 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 OR56B4Q8NH76 319 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 MRAPQ8TCY5 172 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 NABP1Q96AH0 204 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 DUS3LQ96G46 650 aaKnown RBP3.19□□□□□ -1.9
UBR4-209ENST00000465036 PYURFQ96I23 114 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 Q96M85 177 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 OR51B6Q9H340 312 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 TXNIPQ9H3M7 391 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 CA10Q9NS85 328 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 CBLN4Q9NTU7 201 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 TMEM38BQ9NVV0 291 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 MCUBQ9NWR8 336 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 TAS2R1Q9NYW7 299 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 DUX4Q9UBX2 424 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 ATPIF1Q9UII2 106 aa3.19□□□□□ -1.9
UBR4-209ENST00000465036 SAMD4AQ9UPU9 718 aaKnown RBP3.19□□□□□ -1.9
UBR4-209ENST00000465036 PRELID1Q9Y255 219 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms