RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 C18orf15Q96N68 181 aa6.9□□□□□ -1.3
APP-213ENST00000464867 DPCDQ9BVM2 203 aaPredicted RBP6.9□□□□□ -1.3
APP-213ENST00000464867 TEX12Q9BXU0 123 aa6.9□□□□□ -1.3
APP-213ENST00000464867 MRPL20Q9BYC9 149 aaKnown RBP6.9□□□□□ -1.3
APP-213ENST00000464867 C6orf62Q9GZU0 229 aaPredicted RBP6.9□□□□□ -1.3
APP-213ENST00000464867 ING4Q9UNL4 249 aa6.9□□□□□ -1.3
APP-213ENST00000464867 IGLV2-18A0A075B6J9 118 aa6.89□□□□□ -1.31
APP-213ENST00000464867 TRAV10A0A0B4J240 114 aa6.89□□□□□ -1.31
APP-213ENST00000464867 IGKV1-9A0A0C4DH69 117 aa6.89□□□□□ -1.31
APP-213ENST00000464867 PRR32B1ATL7 298 aa6.89□□□□□ -1.31
APP-213ENST00000464867 TUSC2O75896 110 aa6.89□□□□□ -1.31
APP-213ENST00000464867 CA2P00918 260 aa6.89□□□□□ -1.31
APP-213ENST00000464867 IFNA21P01568 189 aa6.89□□□□□ -1.31
APP-213ENST00000464867 IFNA17P01571 189 aa6.89□□□□□ -1.31
APP-213ENST00000464867 SCTP09683 121 aa6.89□□□□□ -1.31
APP-213ENST00000464867 RPL35AP18077 110 aaKnown RBP6.89□□□□□ -1.31
APP-213ENST00000464867 CBLN1P23435 193 aa6.89□□□□□ -1.31
APP-213ENST00000464867 FXYD3Q14802 87 aa6.89□□□□□ -1.31
APP-213ENST00000464867 UBE2DNLQ8IWF7 75 aa6.89□□□□□ -1.31
APP-213ENST00000464867 ZNF439Q8NDP4 499 aa6.89□□□□□ -1.31
APP-213ENST00000464867 OR11H2Q8NH07 326 aa6.89□□□□□ -1.31
APP-213ENST00000464867 OR4A5Q8NH83 315 aa6.89□□□□□ -1.31
APP-213ENST00000464867 MRPS24Q96EL2 167 aaKnown RBP6.89□□□□□ -1.31
APP-213ENST00000464867 RNF126Q9BV68 326 aa6.89□□□□□ -1.31
APP-213ENST00000464867 COA4Q9NYJ1 87 aa6.89□□□□□ -1.31
APP-213ENST00000464867 METTL1Q9UBP6 276 aaKnown RBP6.89□□□□□ -1.31
APP-213ENST00000464867 ENOPH1Q9UHY7 261 aa6.89□□□□□ -1.31
APP-213ENST00000464867 MAGEL2Q9UJ55 1249 aa6.89□□□□□ -1.31
APP-213ENST00000464867 TRAV25A0A0B4J276 109 aa6.88□□□□□ -1.31
APP-213ENST00000464867 ZNF670-ZNF695F2Z2N8 137 aa6.88□□□□□ -1.31
APP-213ENST00000464867 H7C2Y5 167 aa6.88□□□□□ -1.31
APP-213ENST00000464867 LGALS9O00182 355 aa6.88□□□□□ -1.31
APP-213ENST00000464867 MAGEB4O15481 346 aaPredicted RBP6.88□□□□□ -1.31
APP-213ENST00000464867 KRT8P05787 483 aa6.88□□□□□ -1.31
APP-213ENST00000464867 RBMY1CP0DJD4 496 aa6.88□□□□□ -1.31
APP-213ENST00000464867 MC5RP33032 325 aa6.88□□□□□ -1.31
APP-213ENST00000464867 IL13RA2Q14627 380 aa6.88□□□□□ -1.31
APP-213ENST00000464867 FAM209BQ5JX69 171 aa6.88□□□□□ -1.31
APP-213ENST00000464867 PRR18Q8N4B5 295 aa6.88□□□□□ -1.31
APP-213ENST00000464867 STX19Q8N4C7 294 aa6.88□□□□□ -1.31
APP-213ENST00000464867 OR2C3Q8N628 320 aa6.88□□□□□ -1.31
APP-213ENST00000464867 SUMF2Q8NBJ7 301 aa6.88□□□□□ -1.31
APP-213ENST00000464867 BBS1Q8NFJ9 593 aa6.88□□□□□ -1.31
APP-213ENST00000464867 NEK7Q8TDX7 302 aa6.88□□□□□ -1.31
APP-213ENST00000464867 GHSRQ92847 366 aa6.88□□□□□ -1.31
APP-213ENST00000464867 GALNT14Q96FL9 552 aa6.88□□□□□ -1.31
APP-213ENST00000464867 CNN2Q99439 309 aaKnown RBP6.88□□□□□ -1.31
APP-213ENST00000464867 ABHD14AQ9BUJ0 271 aa6.88□□□□□ -1.31
APP-213ENST00000464867 PARP12Q9H0J9 701 aaKnown RBP6.88□□□□□ -1.31
APP-213ENST00000464867 MAP6D1Q9H9H5 199 aa6.88□□□□□ -1.31
APP-213ENST00000464867 SELENOKQ9Y6D0 94 aa6.88□□□□□ -1.31
APP-213ENST00000464867 APOBP04114 4563 aaKnown RBP6.88□□□□□ -1.31
APP-213ENST00000464867 LOC107986453A0A1B0GWG9 222 aa6.87□□□□□ -1.31
APP-213ENST00000464867 MPTX1A8MV57 137 aa6.87□□□□□ -1.31
APP-213ENST00000464867 AIPO00170 330 aa6.87□□□□□ -1.31
APP-213ENST00000464867 BMPR1BO00238 502 aa6.87□□□□□ -1.31
APP-213ENST00000464867 DEFB4AO15263 64 aa6.87□□□□□ -1.31
APP-213ENST00000464867 RBBP9O75884 186 aa6.87□□□□□ -1.31
APP-213ENST00000464867 FADS2O95864 444 aaKnown RBP6.87□□□□□ -1.31
APP-213ENST00000464867 SEMG1P04279 462 aa6.87□□□□□ -1.31
APP-213ENST00000464867 UBCP0CG48 685 aaKnown RBP6.87□□□□□ -1.31
APP-213ENST00000464867 T-ENOLP0DO92 83 aa6.87□□□□□ -1.31
APP-213ENST00000464867 SLC2A5P22732 501 aa6.87□□□□□ -1.31
APP-213ENST00000464867 FCGR2BP31994 310 aaPredicted RBP6.87□□□□□ -1.31
APP-213ENST00000464867 OR3A3P47888 321 aa6.87□□□□□ -1.31
APP-213ENST00000464867 DEFA5Q01523 94 aa6.87□□□□□ -1.31
APP-213ENST00000464867 GINS1Q14691 196 aa6.87□□□□□ -1.31
APP-213ENST00000464867 C6orf183Q5T699 404 aa6.87□□□□□ -1.31
APP-213ENST00000464867 ELP2Q6IA86 826 aa6.87□□□□□ -1.31
APP-213ENST00000464867 WDR93Q6P2C0 686 aa6.87□□□□□ -1.31
APP-213ENST00000464867 FAM131AQ6UXB0 335 aa6.87□□□□□ -1.31
APP-213ENST00000464867 Q6ZR54 194 aa6.87□□□□□ -1.31
APP-213ENST00000464867 OR13C5Q8NGS8 318 aa6.87□□□□□ -1.31
APP-213ENST00000464867 FGGYQ96C11 551 aa6.87□□□□□ -1.31
APP-213ENST00000464867 ADAT3Q96EY9 351 aaPredicted RBP6.87□□□□□ -1.31
APP-213ENST00000464867 RNF5Q99942 180 aa6.87□□□□□ -1.31
APP-213ENST00000464867 NDUFAF3Q9BU61 184 aa6.87□□□□□ -1.31
APP-213ENST00000464867 ALG8Q9BVK2 526 aa6.87□□□□□ -1.31
APP-213ENST00000464867 CSTL1Q9H114 145 aa6.87□□□□□ -1.31
APP-213ENST00000464867 HRH4Q9H3N8 390 aa6.87□□□□□ -1.31
APP-213ENST00000464867 GORASP2Q9H8Y8 452 aa6.87□□□□□ -1.31
APP-213ENST00000464867 OR2S2Q9NQN1 319 aa6.87□□□□□ -1.31
APP-213ENST00000464867 TRAPPC2LQ9UL33 140 aa6.87□□□□□ -1.31
APP-213ENST00000464867 AGRNO00468 2067 aa6.86□□□□□ -1.31
APP-213ENST00000464867 FLG2Q5D862 2391 aaPredicted RBP6.86□□□□□ -1.31
APP-213ENST00000464867 ZNF320A2RRD8 509 aa6.86□□□□□ -1.31
APP-213ENST00000464867 OR5H14A6NHG9 310 aa6.86□□□□□ -1.31
APP-213ENST00000464867 ARPC2O15144 300 aa6.86□□□□□ -1.31
APP-213ENST00000464867 OR7C1O76099 320 aaPredicted RBP6.86□□□□□ -1.31
APP-213ENST00000464867 SLPIP03973 132 aa6.86□□□□□ -1.31
APP-213ENST00000464867 ATP5G2Q06055 141 aa6.86□□□□□ -1.31
APP-213ENST00000464867 EXOSC2Q13868 293 aaKnown RBP6.86□□□□□ -1.31
APP-213ENST00000464867 MORN2Q502X0 79 aa6.86□□□□□ -1.31
APP-213ENST00000464867 ZNF833PQ6ZTB9 187 aa6.86□□□□□ -1.31
APP-213ENST00000464867 SLC35F2Q8IXU6 374 aa6.86□□□□□ -1.31
APP-213ENST00000464867 ADAD2Q8NCV1 583 aaKnown RBP6.86□□□□□ -1.31
APP-213ENST00000464867 CACNG8Q8WXS5 425 aa6.86□□□□□ -1.31
APP-213ENST00000464867 CPNE2Q96FN4 548 aaPredicted RBP6.86□□□□□ -1.31
APP-213ENST00000464867 TSNAXQ99598 290 aaKnown RBP6.86□□□□□ -1.31
APP-213ENST00000464867 EFCAB1Q9HAE3 211 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms