RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 TIMM23O14925 209 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 FABP7O15540 132 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 YPEL1O60688 119 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 RGS11O94810 467 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 GSTT2P0CG29 244 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 GSTT2BP0CG30 244 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 ZBTB25P24278 435 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 REG1BP48304 166 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 PROK1P58294 105 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 KRTAP10-3P60369 221 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 MRPS10P82664 201 aaKnown RBP13.65□□□□□ -0.22
VPS52-215ENST00000464425 MORN2Q502X0 79 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 CT45A1Q5HYN5 189 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 PYHIN1Q6K0P9 492 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 SNX29P2Q8IUI4 249 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 LINC00311Q8N616 119 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 DRAM1Q8N682 238 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 ZNF439Q8NDP4 499 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 OR6Q1Q8NGQ2 317 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 OR56B4Q8NH76 319 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 CT45A3Q8NHU0 189 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 GPX8Q8TED1 209 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 IL1F10Q8WWZ1 152 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 YPEL2Q96QA6 119 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 ANAPC10Q9UM13 185 aa13.65□□□□□ -0.22
VPS52-215ENST00000464425 IGKV1-6A0A0C4DH72 117 aa13.64□□□□□ -0.23
VPS52-215ENST00000464425 FABP12A6NFH5 140 aa13.64□□□□□ -0.23
VPS52-215ENST00000464425 CTDSPLO15194 276 aa13.64□□□□□ -0.23
VPS52-215ENST00000464425 CTXN2P0C2S0 81 aa13.64□□□□□ -0.23
VPS52-215ENST00000464425 NAT1P18440 290 aa13.64□□□□□ -0.23
VPS52-215ENST00000464425 PTBP1P26599 531 aaKnown RBP eCLIP13.64□□□□□ -0.23
VPS52-215ENST00000464425 PPP1CCP36873 323 aaKnown RBP13.64□□□□□ -0.23
VPS52-215ENST00000464425 RAB7AP51149 207 aa13.64□□□□□ -0.23
VPS52-215ENST00000464425 BLCAPP62952 87 aa13.64□□□□□ -0.23
VPS52-215ENST00000464425 LINC00299Q6ZSB3 139 aa13.64□□□□□ -0.23
VPS52-215ENST00000464425 MOB3BQ86TA1 216 aa13.64□□□□□ -0.23
VPS52-215ENST00000464425 CCDC190Q86UF4 302 aa13.64□□□□□ -0.23
VPS52-215ENST00000464425 BEST4Q8NFU0 473 aa13.64□□□□□ -0.23
VPS52-215ENST00000464425 MAFIPQ8WZ33 124 aa13.64□□□□□ -0.23
VPS52-215ENST00000464425 CABLES2Q9BTV7 478 aa13.64□□□□□ -0.23
VPS52-215ENST00000464425 TOLLIPQ9H0E2 274 aa13.64□□□□□ -0.23
VPS52-215ENST00000464425 RANBP3Q9H6Z4 567 aaPredicted RBP13.64□□□□□ -0.23
VPS52-215ENST00000464425 ANXA10Q9UJ72 324 aa13.64□□□□□ -0.23
VPS52-215ENST00000464425 IGKV1D-8A0A087WSZ0 117 aa13.63□□□□□ -0.23
VPS52-215ENST00000464425 TRBV6-7A0A0A0MS04 114 aa13.63□□□□□ -0.23
VPS52-215ENST00000464425 A0A1W2PPI3 338 aa13.63□□□□□ -0.23
VPS52-215ENST00000464425 HSD17B6O14756 317 aa13.63□□□□□ -0.23
VPS52-215ENST00000464425 GAPDHP04406 335 aaKnown RBP13.63□□□□□ -0.23
VPS52-215ENST00000464425 FAM106CPP0CH98 169 aa13.63□□□□□ -0.23
VPS52-215ENST00000464425 ETV6P41212 452 aa13.63□□□□□ -0.23
VPS52-215ENST00000464425 IL18Q14116 193 aa13.63□□□□□ -0.23
VPS52-215ENST00000464425 HABP2Q14520 560 aaPredicted RBP13.63□□□□□ -0.23
VPS52-215ENST00000464425 HNF4GQ14541 408 aa13.63□□□□□ -0.23
VPS52-215ENST00000464425 HERPUD1Q15011 391 aa13.63□□□□□ -0.23
VPS52-215ENST00000464425 Q6ZS46 218 aa13.63□□□□□ -0.23
VPS52-215ENST00000464425 SLC25A48Q6ZT89 311 aaKnown RBP13.63□□□□□ -0.23
VPS52-215ENST00000464425 GVQW1Q8N7I0 195 aa13.63□□□□□ -0.23
VPS52-215ENST00000464425 OR2T6Q8NHC8 308 aa13.63□□□□□ -0.23
VPS52-215ENST00000464425 FCAMRQ8WWV6 532 aa13.63□□□□□ -0.23
VPS52-215ENST00000464425 SLC25A33Q9BSK2 321 aa13.63□□□□□ -0.23
VPS52-215ENST00000464425 ZNF702PQ9H963 129 aa13.63□□□□□ -0.23
VPS52-215ENST00000464425 IFT46Q9NQC8 304 aa13.63□□□□□ -0.23
VPS52-215ENST00000464425 GABARAPH6UMI1 98 aa13.62□□□□□ -0.23
VPS52-215ENST00000464425 ITGB1BP1O14713 200 aa13.62□□□□□ -0.23
VPS52-215ENST00000464425 SNRNP70P08621 437 aaKnown RBP13.62□□□□□ -0.23
VPS52-215ENST00000464425 IL3RAP26951 378 aa13.62□□□□□ -0.23
VPS52-215ENST00000464425 CEACAM6P40199 344 aa13.62□□□□□ -0.23
VPS52-215ENST00000464425 HES1Q14469 280 aa13.62□□□□□ -0.23
VPS52-215ENST00000464425 IGSF11Q5DX21 431 aa13.62□□□□□ -0.23
VPS52-215ENST00000464425 OR8H3Q8N146 312 aa13.62□□□□□ -0.23
VPS52-215ENST00000464425 LYG1Q8N1E2 194 aa13.62□□□□□ -0.23
VPS52-215ENST00000464425 OR10J5Q8NHC4 309 aa13.62□□□□□ -0.23
VPS52-215ENST00000464425 CFHR4Q92496 578 aa13.62□□□□□ -0.23
VPS52-215ENST00000464425 RBM14Q96PK6 669 aaKnown RBP13.62□□□□□ -0.23
VPS52-215ENST00000464425 PRSS22Q9GZN4 317 aa13.62□□□□□ -0.23
VPS52-215ENST00000464425 SLC23A1Q9UHI7 598 aa13.62□□□□□ -0.23
VPS52-215ENST00000464425 IGHV3-72A0A0B4J1Y9 119 aa13.61□□□□□ -0.23
VPS52-215ENST00000464425 IGHV1-3A0A0C4DH29 117 aa13.61□□□□□ -0.23
VPS52-215ENST00000464425 MEIS3P1A6NDR6 274 aa13.61□□□□□ -0.23
VPS52-215ENST00000464425 FAM90A9PA6NNJ1 464 aa13.61□□□□□ -0.23
VPS52-215ENST00000464425 HSPA12AO43301 675 aa13.61□□□□□ -0.23
VPS52-215ENST00000464425 SSBP1Q04837 148 aaKnown RBP13.61□□□□□ -0.23
VPS52-215ENST00000464425 ZNF816Q0VGE8 651 aaPredicted RBP13.61□□□□□ -0.23
VPS52-215ENST00000464425 SPANXN2Q5MJ10 180 aa13.61□□□□□ -0.23
VPS52-215ENST00000464425 FAM131AQ6UXB0 335 aa13.61□□□□□ -0.23
VPS52-215ENST00000464425 THNSL2Q86YJ6 484 aa13.61□□□□□ -0.23
VPS52-215ENST00000464425 LYSMD2Q8IV50 215 aa13.61□□□□□ -0.23
VPS52-215ENST00000464425 OR5AP2Q8NGF4 316 aa13.61□□□□□ -0.23
VPS52-215ENST00000464425 SNAPC3Q92966 411 aa13.61□□□□□ -0.23
VPS52-215ENST00000464425 ST6GALNAC6Q969X2 333 aa13.61□□□□□ -0.23
VPS52-215ENST00000464425 ABHD14AQ9BUJ0 271 aa13.61□□□□□ -0.23
VPS52-215ENST00000464425 GHITMQ9H3K2 345 aa13.61□□□□□ -0.23
VPS52-215ENST00000464425 PTTG2Q9NZH5 202 aa13.61□□□□□ -0.23
VPS52-215ENST00000464425 OR1A1Q9P1Q5 309 aa13.61□□□□□ -0.23
VPS52-215ENST00000464425 MTFP1Q9UDX5 166 aa13.61□□□□□ -0.23
VPS52-215ENST00000464425 SH2D7A6NKC9 451 aaPredicted RBP13.6□□□□□ -0.23
VPS52-215ENST00000464425 BET1O15155 118 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 GSTZ1O43708 216 aaPredicted RBP13.6□□□□□ -0.23
VPS52-215ENST00000464425 RBBP9O75884 186 aa13.6□□□□□ -0.23
VPS52-215ENST00000464425 OR2F2O95006 317 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms