RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 MRPL54Q6P161 138 aaKnown RBP7.8□□□□□ -1.16
HPS4-208ENST00000464362 SLC23A3Q6PIS1 610 aa7.8□□□□□ -1.16
HPS4-208ENST00000464362 CT45A3Q8NHU0 189 aa7.8□□□□□ -1.16
HPS4-208ENST00000464362 FNDC1Q4ZHG4 1894 aaPredicted RBP7.8□□□□□ -1.16
HPS4-208ENST00000464362 ZNF891A8MT65 544 aaPredicted RBP7.8□□□□□ -1.16
HPS4-208ENST00000464362 PRRG2O14669 202 aa7.8□□□□□ -1.16
HPS4-208ENST00000464362 TMPRSS2O15393 492 aa7.8□□□□□ -1.16
HPS4-208ENST00000464362 RHBDL1O75783 438 aa7.8□□□□□ -1.16
HPS4-208ENST00000464362 OR2H2O95918 312 aa7.8□□□□□ -1.16
HPS4-208ENST00000464362 DANCRP0C864 163 aa7.8□□□□□ -1.16
HPS4-208ENST00000464362 OPRK1P41145 380 aa7.8□□□□□ -1.16
HPS4-208ENST00000464362 AMTP48728 403 aa7.8□□□□□ -1.16
HPS4-208ENST00000464362 SLC35E3Q7Z769 313 aa7.8□□□□□ -1.16
HPS4-208ENST00000464362 MRGPRGQ86SM5 289 aa7.8□□□□□ -1.16
HPS4-208ENST00000464362 FGFRL1Q8N441 504 aa7.8□□□□□ -1.16
HPS4-208ENST00000464362 OR4A4PQ8NGN8 299 aa7.8□□□□□ -1.16
HPS4-208ENST00000464362 ZPBPQ9BS86 351 aa7.8□□□□□ -1.16
HPS4-208ENST00000464362 MRPL13Q9BYD1 178 aaKnown RBP7.8□□□□□ -1.16
HPS4-208ENST00000464362 EGLN1Q9GZT9 426 aa7.8□□□□□ -1.16
HPS4-208ENST00000464362 IL36GQ9NZH8 169 aa7.8□□□□□ -1.16
HPS4-208ENST00000464362 ZNF581Q9P0T4 197 aa7.8□□□□□ -1.16
HPS4-208ENST00000464362 ANAPC1Q9H1A4 1944 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 IGHV3-21A0A0B4J1V1 117 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 TRAV17A0A0B4J275 112 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 SPAARA0A1B0GVQ0 90 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 CLN5O75503 358 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 SPNS3Q6ZMD2 512 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 POM121L2Q96KW2 1035 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 PCGF1Q9BSM1 259 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 TRAV38-1A0A0B4J264 116 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 A0A1B0GU03 582 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 PITX3O75364 302 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 ORM2P19652 201 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 PNRC1Q12796 327 aaPredicted RBP7.79□□□□□ -1.16
HPS4-208ENST00000464362 PSG5Q15238 335 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 KHDC3LQ587J8 217 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 C16orf82Q7Z2V1 217 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 SELENOHQ8IZQ5 122 aaKnown RBP7.79□□□□□ -1.16
HPS4-208ENST00000464362 VKORC1L1Q8N0U8 176 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 ZNF71Q9NQZ8 489 aaPredicted RBP7.79□□□□□ -1.16
HPS4-208ENST00000464362 ARL2-SNX15V9GYD0 113 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 NDUFB4O95168 129 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 IGHMP01871 453 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 HOXB1P14653 301 aaPredicted RBP7.79□□□□□ -1.16
HPS4-208ENST00000464362 MRPS11P82912 194 aaKnown RBP7.79□□□□□ -1.16
HPS4-208ENST00000464362 KDF1Q8NAX2 398 aaPredicted RBP7.79□□□□□ -1.16
HPS4-208ENST00000464362 SGMS2Q8NHU3 365 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 DNASE2BQ8WZ79 361 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 SRD5A3Q9H8P0 318 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 HES4Q9HCC6 221 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 PLXNA3P51805 1871 aa7.79□□□□□ -1.16
HPS4-208ENST00000464362 DUXBA0A1W2PPF3 345 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 IGHV3-48P01763 117 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 CHRNB4P30926 498 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 MISP3Q96FF7 219 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 LYZL4Q96KX0 146 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 GSN-AS1Q9NRJ2 163 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 PAM16Q9Y3D7 125 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 CACNA1AO00555 2505 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 E9PQ18 207 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 CHEK1O14757 476 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 WNT9BO14905 357 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 HBZP02008 142 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 MOB3BQ86TA1 216 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 MARS2Q96GW9 593 aaKnown RBP7.78□□□□□ -1.16
HPS4-208ENST00000464362 RBKSQ9H477 322 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 TUBD1Q9UJT1 453 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 ZG16O60844 167 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 HSPB1P04792 205 aaKnown RBP7.78□□□□□ -1.16
HPS4-208ENST00000464362 FAM157CP0CG43 387 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 GNG4P50150 75 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 SUB1P53999 127 aaKnown RBP eCLIP7.78□□□□□ -1.16
HPS4-208ENST00000464362 FOXG1P55316 489 aaPredicted RBP7.78□□□□□ -1.16
HPS4-208ENST00000464362 IQCJQ1A5X6 159 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 DPPA3Q6W0C5 159 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 NFAM1Q8NET5 270 aaPredicted RBP7.78□□□□□ -1.16
HPS4-208ENST00000464362 OR10G8Q8NGN5 311 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 CORO2AQ92828 525 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 BOD1Q96IK1 185 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 VAMP8Q9BV40 100 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 REG4Q9BYZ8 158 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 LYRM2Q9NU23 88 aaPredicted RBP7.78□□□□□ -1.16
HPS4-208ENST00000464362 GOLT1BQ9Y3E0 138 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 TRGV8A0A0C4DH27 118 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 SERTM2A0A1B0GWG4 89 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 TFF1P04155 84 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 SP1P08047 785 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 CRISP2P16562 243 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 COX7A1P24310 79 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 IER3P46695 156 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 RPS23P62266 143 aaKnown RBP7.78□□□□□ -1.16
HPS4-208ENST00000464362 CCL8P80075 99 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 TNFAIP6P98066 277 aaPredicted RBP7.78□□□□□ -1.16
HPS4-208ENST00000464362 MEF2BQ02080 365 aaPredicted RBP7.78□□□□□ -1.16
HPS4-208ENST00000464362 SCGB2A2Q13296 93 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 DHRS7BQ6IAN0 325 aaPredicted RBP7.78□□□□□ -1.16
HPS4-208ENST00000464362 FGFBP3Q8TAT2 258 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 SIGLEC12Q96PQ1 595 aa7.78□□□□□ -1.16
HPS4-208ENST00000464362 MYOZ1Q9NP98 299 aaPredicted RBP7.78□□□□□ -1.16
HPS4-208ENST00000464362 NGBQ9NPG2 151 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms