RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 GINS3Q9BRX5 216 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 PARP12Q9H0J9 701 aaKnown RBP12.11□□□□□ -0.47
COL5A1-205ENST00000464187 RALYQ9UKM9 306 aaKnown RBP12.11□□□□□ -0.47
COL5A1-205ENST00000464187 FLNCQ14315 2725 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 MYO18BQ8IUG5 2567 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 BORCS7-ASMTA0A0B4J1R7 106 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 A0A0G2JRQ6 117 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 IGSF23A1L1A6 192 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 FAM24AA6NFZ4 105 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 SRRM5B3KS81 715 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 PSG2P11465 335 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 ADCYAP1P18509 176 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 LMO1P25800 156 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 ARHGDIBP52566 201 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 DEFA5Q01523 94 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 OR2C3Q8N628 320 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 GCSAMQ8N6F7 178 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 MAGT1Q9H0U3 335 aa12.11□□□□□ -0.47
COL5A1-205ENST00000464187 TMEM30CPA0ZSE6 113 aa12.1□□□□□ -0.47
COL5A1-205ENST00000464187 HSPA12AO43301 675 aa12.1□□□□□ -0.47
COL5A1-205ENST00000464187 TFF1P04155 84 aa12.1□□□□□ -0.47
COL5A1-205ENST00000464187 EGR1P18146 543 aa12.1□□□□□ -0.47
COL5A1-205ENST00000464187 TNFRSF1AP19438 455 aa12.1□□□□□ -0.47
COL5A1-205ENST00000464187 BLOC1S1P78537 153 aa12.1□□□□□ -0.47
COL5A1-205ENST00000464187 SMIM21Q3B7S5 101 aa12.1□□□□□ -0.47
COL5A1-205ENST00000464187 BTNL8Q6UX41 500 aa12.1□□□□□ -0.47
COL5A1-205ENST00000464187 Q6ZRG5 221 aa12.1□□□□□ -0.47
COL5A1-205ENST00000464187 TMEM231Q9H6L2 316 aa12.1□□□□□ -0.47
COL5A1-205ENST00000464187 SAP30LQ9HAJ7 183 aa12.1□□□□□ -0.47
COL5A1-205ENST00000464187 PARP11Q9NR21 331 aa12.1□□□□□ -0.47
COL5A1-205ENST00000464187 PPP1R3CQ9UQK1 317 aa12.1□□□□□ -0.47
COL5A1-205ENST00000464187 DOPEY1Q5JWR5 2465 aa12.1□□□□□ -0.47
COL5A1-205ENST00000464187 USP9XQ93008 2570 aaPredicted RBP12.1□□□□□ -0.47
COL5A1-205ENST00000464187 LHBP01229 141 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 HEXAP06865 529 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 SPP1P10451 314 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 PVALBP20472 110 aaPredicted RBP12.09□□□□□ -0.47
COL5A1-205ENST00000464187 ID3Q02535 119 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 LYRM2Q9NU23 88 aaPredicted RBP12.09□□□□□ -0.47
COL5A1-205ENST00000464187 KCNS2Q9ULS6 477 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 A0A1W2PPR1 153 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 ATG12O94817 140 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 NXPH3O95157 252 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 IGKV1-39P01597 117 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 IGKV1D-39P04432 117 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 SEC11BP0C7V7 166 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 CAV2P51636 162 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 SLC35E4Q6ICL7 350 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 TGIF2LYQ8IUE0 185 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 ODF3L1Q8IXM7 274 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 OR1L1Q8NH94 360 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 Q8TCH9 128 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 GPR146Q96CH1 333 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 COQ2Q96H96 371 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 AKR1E2Q96JD6 320 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 EGLN1Q9GZT9 426 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 SH3BGRL3Q9H299 93 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 FAM212BQ9NTI7 297 aaPredicted RBP12.09□□□□□ -0.47
COL5A1-205ENST00000464187 RNF7Q9UBF6 113 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 METRNQ9UJH8 293 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 FAM96BQ9Y3D0 163 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 CACNA1DQ01668 2161 aa12.09□□□□□ -0.47
COL5A1-205ENST00000464187 CHD6Q8TD26 2715 aa12.08□□□□□ -0.48
COL5A1-205ENST00000464187 C12orf77C9JDV5 145 aa12.08□□□□□ -0.48
COL5A1-205ENST00000464187 PITX3O75364 302 aa12.08□□□□□ -0.48
COL5A1-205ENST00000464187 TMEM50AO95807 157 aa12.08□□□□□ -0.48
COL5A1-205ENST00000464187 SERPINE2P07093 398 aa12.08□□□□□ -0.48
COL5A1-205ENST00000464187 OR8U9P0C7N5 309 aa12.08□□□□□ -0.48
COL5A1-205ENST00000464187 MMP9P14780 707 aa12.08□□□□□ -0.48
COL5A1-205ENST00000464187 MUC1P15941 1255 aaPredicted RBP12.08□□□□□ -0.48
COL5A1-205ENST00000464187 EPHA1P21709 976 aa12.08□□□□□ -0.48
COL5A1-205ENST00000464187 CEACAM6P40199 344 aa12.08□□□□□ -0.48
COL5A1-205ENST00000464187 OR3A1P47881 315 aa12.08□□□□□ -0.48
COL5A1-205ENST00000464187 VAMP2P63027 116 aa12.08□□□□□ -0.48
COL5A1-205ENST00000464187 SRSF1Q07955 248 aaKnown RBP eCLIP12.08□□□□□ -0.48
COL5A1-205ENST00000464187 AESQ08117 197 aa12.08□□□□□ -0.48
COL5A1-205ENST00000464187 ZNF273Q14593 569 aa12.08□□□□□ -0.48
COL5A1-205ENST00000464187 C10orf91Q5T1B1 145 aa12.08□□□□□ -0.48
COL5A1-205ENST00000464187 OR8U1Q8NH10 309 aa12.08□□□□□ -0.48
COL5A1-205ENST00000464187 PLEKHF2Q9H8W4 249 aa12.08□□□□□ -0.48
COL5A1-205ENST00000464187 TREM1Q9NP99 234 aa12.08□□□□□ -0.48
COL5A1-205ENST00000464187 RBM7Q9Y580 266 aaKnown RBP12.08□□□□□ -0.48
COL5A1-205ENST00000464187 KLF2Q9Y5W3 355 aaPredicted RBP12.08□□□□□ -0.48
COL5A1-205ENST00000464187 SPTAN1Q13813 2472 aaKnown RBP12.08□□□□□ -0.48
COL5A1-205ENST00000464187 FAM208BQ5VWN6 2430 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 LOC105371267A0A1B0GV96 52 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 CYB5R3P00387 301 aaPredicted RBP12.07□□□□□ -0.48
COL5A1-205ENST00000464187 DANCRP0C864 163 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 SLC25A6P12236 298 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 F2RL1P55085 397 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 FAM201AQ5SY85 155 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 DRAM1Q8N682 238 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 TMEM252Q8N6L7 170 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 LYPD6BQ8NI32 183 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 TSNAXQ99598 290 aaKnown RBP12.07□□□□□ -0.48
COL5A1-205ENST00000464187 NKX6-2Q9C056 277 aaPredicted RBP12.07□□□□□ -0.48
COL5A1-205ENST00000464187 UQCC1Q9NVA1 299 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 KCNIP1Q9NZI2 227 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 PIGBOS1A0A0B4J2F0 54 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 A0A1B0GU03 582 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms