RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 RGP1Q92546 391 aaPredicted RBP11□□□□□ -0.65
SMC1A-204ENST00000463684 ZNF184Q99676 751 aaPredicted RBP11□□□□□ -0.65
SMC1A-204ENST00000463684 RNF5Q99942 180 aa11□□□□□ -0.65
SMC1A-204ENST00000463684 MBNL3Q9NUK0 354 aaKnown RBP11□□□□□ -0.65
SMC1A-204ENST00000463684 ERVK13-1Q9NX77 482 aa11□□□□□ -0.65
SMC1A-204ENST00000463684 PIPOXQ9P0Z9 390 aa11□□□□□ -0.65
SMC1A-204ENST00000463684 METTL1Q9UBP6 276 aaKnown RBP11□□□□□ -0.65
SMC1A-204ENST00000463684 STEAP1Q9UHE8 339 aa11□□□□□ -0.65
SMC1A-204ENST00000463684 OAZ3Q9UMX2 235 aa11□□□□□ -0.65
SMC1A-204ENST00000463684 LRRC42Q9Y546 428 aa11□□□□□ -0.65
SMC1A-204ENST00000463684 IZUMO1RA6ND01 250 aa10.99□□□□□ -0.65
SMC1A-204ENST00000463684 OR5H14A6NHG9 310 aa10.99□□□□□ -0.65
SMC1A-204ENST00000463684 H3BUA1 57 aa10.99□□□□□ -0.65
SMC1A-204ENST00000463684 RAB29O14966 203 aa10.99□□□□□ -0.65
SMC1A-204ENST00000463684 SC5DO75845 299 aa10.99□□□□□ -0.65
SMC1A-204ENST00000463684 CA2P00918 260 aa10.99□□□□□ -0.65
SMC1A-204ENST00000463684 GLAP06280 429 aa10.99□□□□□ -0.65
SMC1A-204ENST00000463684 CSN3P07498 182 aa10.99□□□□□ -0.65
SMC1A-204ENST00000463684 FUT3P21217 361 aa10.99□□□□□ -0.65
SMC1A-204ENST00000463684 GTF2A1P52655 376 aaPredicted RBP10.99□□□□□ -0.65
SMC1A-204ENST00000463684 RIPK1Q13546 671 aa10.99□□□□□ -0.65
SMC1A-204ENST00000463684 POC5Q8NA72 575 aa10.99□□□□□ -0.65
SMC1A-204ENST00000463684 OR2K2Q8NGT1 345 aa10.99□□□□□ -0.65
SMC1A-204ENST00000463684 NEURL2Q9BR09 285 aa10.99□□□□□ -0.65
SMC1A-204ENST00000463684 SLC2A8Q9NY64 477 aa10.99□□□□□ -0.65
SMC1A-204ENST00000463684 WASHC3Q9Y3C0 194 aa10.99□□□□□ -0.65
SMC1A-204ENST00000463684 ORC6Q9Y5N6 252 aa10.99□□□□□ -0.65
SMC1A-204ENST00000463684 FAM90A7PA6NKC0 464 aa10.98□□□□□ -0.65
SMC1A-204ENST00000463684 FAM90A23PA8MXZ1 464 aa10.98□□□□□ -0.65
SMC1A-204ENST00000463684 SLC22A1O15245 554 aa10.98□□□□□ -0.65
SMC1A-204ENST00000463684 BRI3O95415 125 aa10.98□□□□□ -0.65
SMC1A-204ENST00000463684 CT45A6P0DMU7 189 aa10.98□□□□□ -0.65
SMC1A-204ENST00000463684 CT45A5P0DMU8 189 aa10.98□□□□□ -0.65
SMC1A-204ENST00000463684 CT45A7P0DMV0 189 aa10.98□□□□□ -0.65
SMC1A-204ENST00000463684 FXYD3Q14802 87 aa10.98□□□□□ -0.65
SMC1A-204ENST00000463684 PSG5Q15238 335 aa10.98□□□□□ -0.65
SMC1A-204ENST00000463684 RPL22L1Q6P5R6 122 aaKnown RBP10.98□□□□□ -0.65
SMC1A-204ENST00000463684 GLIPR1L1Q6UWM5 242 aa10.98□□□□□ -0.65
SMC1A-204ENST00000463684 C5orf24Q7Z6I8 188 aa10.98□□□□□ -0.65
SMC1A-204ENST00000463684 OR5T1Q8NG75 326 aa10.98□□□□□ -0.65
SMC1A-204ENST00000463684 GRPEL2Q8TAA5 225 aa10.98□□□□□ -0.65
SMC1A-204ENST00000463684 ST6GALNAC5Q9BVH7 336 aa10.98□□□□□ -0.65
SMC1A-204ENST00000463684 SELENOIQ9C0D9 397 aa10.98□□□□□ -0.65
SMC1A-204ENST00000463684 IFI27L2Q9H2X8 130 aa10.98□□□□□ -0.65
SMC1A-204ENST00000463684 ABRACLQ9P1F3 81 aa10.98□□□□□ -0.65
SMC1A-204ENST00000463684 PEMTQ9UBM1 199 aa10.98□□□□□ -0.65
SMC1A-204ENST00000463684 PEF1Q9UBV8 284 aaKnown RBP10.98□□□□□ -0.65
SMC1A-204ENST00000463684 H0YJW9 148 aa10.97□□□□□ -0.65
SMC1A-204ENST00000463684 ST8SIA5O15466 376 aa10.97□□□□□ -0.65
SMC1A-204ENST00000463684 GPX5O75715 221 aa10.97□□□□□ -0.65
SMC1A-204ENST00000463684 FSTP19883 344 aa10.97□□□□□ -0.65
SMC1A-204ENST00000463684 AADACP22760 399 aa10.97□□□□□ -0.65
SMC1A-204ENST00000463684 RPEL1Q2QD12 228 aa10.97□□□□□ -0.65
SMC1A-204ENST00000463684 CCDC58Q4VC31 144 aa10.97□□□□□ -0.65
SMC1A-204ENST00000463684 RPL39P5Q59GN2 51 aa10.97□□□□□ -0.65
SMC1A-204ENST00000463684 C6orf141Q5SZD1 244 aa10.97□□□□□ -0.65
SMC1A-204ENST00000463684 DMKNQ6E0U4 476 aaPredicted RBP10.97□□□□□ -0.65
SMC1A-204ENST00000463684 GLDNQ6ZMI3 551 aaPredicted RBP10.97□□□□□ -0.65
SMC1A-204ENST00000463684 LAX1Q8IWV1 398 aa10.97□□□□□ -0.65
SMC1A-204ENST00000463684 MRPL30Q8TCC3 161 aaKnown RBP10.97□□□□□ -0.65
SMC1A-204ENST00000463684 IL1F10Q8WWZ1 152 aa10.97□□□□□ -0.65
SMC1A-204ENST00000463684 GHSRQ92847 366 aa10.97□□□□□ -0.65
SMC1A-204ENST00000463684 MUL1Q969V5 352 aa10.97□□□□□ -0.65
SMC1A-204ENST00000463684 ORAI1Q96D31 301 aa10.97□□□□□ -0.65
SMC1A-204ENST00000463684 CENPNQ96H22 339 aaPredicted RBP10.97□□□□□ -0.65
SMC1A-204ENST00000463684 TSNAXQ99598 290 aaKnown RBP10.97□□□□□ -0.65
SMC1A-204ENST00000463684 BANF2Q9H503 90 aa10.97□□□□□ -0.65
SMC1A-204ENST00000463684 CKLFQ9UBR5 152 aa10.97□□□□□ -0.65
SMC1A-204ENST00000463684 AASSQ9UDR5 926 aa10.97□□□□□ -0.65
SMC1A-204ENST00000463684 HERC2O95714 4834 aa10.97□□□□□ -0.65
SMC1A-204ENST00000463684 CXorf65A6NEN9 183 aa10.96□□□□□ -0.65
SMC1A-204ENST00000463684 SAC3D1A6NKF1 404 aa10.96□□□□□ -0.65
SMC1A-204ENST00000463684 AIREO43918 545 aa10.96□□□□□ -0.65
SMC1A-204ENST00000463684 OR2A4O95047 310 aa10.96□□□□□ -0.65
SMC1A-204ENST00000463684 AWAT2Q6E213 333 aa10.96□□□□□ -0.65
SMC1A-204ENST00000463684 JAGN1Q8N5M9 183 aa10.96□□□□□ -0.65
SMC1A-204ENST00000463684 DEFB125Q8N687 156 aa10.96□□□□□ -0.65
SMC1A-204ENST00000463684 OR5AN1Q8NGI8 311 aa10.96□□□□□ -0.65
SMC1A-204ENST00000463684 Q96MT0 163 aa10.96□□□□□ -0.65
SMC1A-204ENST00000463684 SRD5A3Q9H8P0 318 aa10.96□□□□□ -0.65
SMC1A-204ENST00000463684 AMBNQ9NP70 447 aa10.96□□□□□ -0.65
SMC1A-204ENST00000463684 SLC23A1Q9UHI7 598 aa10.96□□□□□ -0.65
SMC1A-204ENST00000463684 OR11H12B2RN74 326 aa10.95□□□□□ -0.66
SMC1A-204ENST00000463684 CRTAPO75718 401 aaPredicted RBP10.95□□□□□ -0.66
SMC1A-204ENST00000463684 BAG2O95816 211 aa10.95□□□□□ -0.66
SMC1A-204ENST00000463684 MGMTP16455 207 aa10.95□□□□□ -0.66
SMC1A-204ENST00000463684 CPEP16870 476 aa10.95□□□□□ -0.66
SMC1A-204ENST00000463684 IGFBP3P17936 291 aaPredicted RBP10.95□□□□□ -0.66
SMC1A-204ENST00000463684 LGALS7P47929 136 aa10.95□□□□□ -0.66
SMC1A-204ENST00000463684 MECP2P51608 486 aaKnown RBP10.95□□□□□ -0.66
SMC1A-204ENST00000463684 RPS16P62249 146 aaKnown RBP10.95□□□□□ -0.66
SMC1A-204ENST00000463684 ZNF343Q6P1L6 599 aa10.95□□□□□ -0.66
SMC1A-204ENST00000463684 SNAPC3Q92966 411 aa10.95□□□□□ -0.66
SMC1A-204ENST00000463684 SLC7A6OSQ96CW6 309 aaPredicted RBP10.95□□□□□ -0.66
SMC1A-204ENST00000463684 USMG5Q96IX5 58 aa10.95□□□□□ -0.66
SMC1A-204ENST00000463684 TMEM68Q96MH6 324 aa10.95□□□□□ -0.66
SMC1A-204ENST00000463684 FAM53CQ9NYF3 392 aa10.95□□□□□ -0.66
SMC1A-204ENST00000463684 ADAM30Q9UKF2 790 aa10.95□□□□□ -0.66
SMC1A-204ENST00000463684 FRAS1Q86XX4 4008 aa10.94□□□□□ -0.66
SMC1A-204ENST00000463684 A0A0B4J203 849 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms