RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 TREM1Q9NP99 234 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 CHD3Q12873 2000 aaKnown RBP8.3□□□□□ -1.08
PTPRD-207ENST00000463477 HEATR1Q9H583 2144 aaKnown RBP8.3□□□□□ -1.08
PTPRD-207ENST00000463477 A0A1B0GU03 582 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 A0A1B0GWJ7 208 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 SHISA9B4DS77 424 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 FAM157AC9JC47 383 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 TOR1AO14656 332 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 SH2D1BO14796 132 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 ADAM20O43506 726 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 HEXAP06865 529 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 ZNF44P15621 663 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 MUC1P15941 1255 aaPredicted RBP8.3□□□□□ -1.08
PTPRD-207ENST00000463477 ATF4P18848 351 aaPredicted RBP8.3□□□□□ -1.08
PTPRD-207ENST00000463477 ZNF83P51522 516 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 IDH3GP51553 393 aaPredicted RBP8.3□□□□□ -1.08
PTPRD-207ENST00000463477 SRSF3P84103 164 aaKnown RBP8.3□□□□□ -1.08
PTPRD-207ENST00000463477 ZNF154Q13106 437 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 FIP1L1Q6UN15 594 aaKnown RBP8.3□□□□□ -1.08
PTPRD-207ENST00000463477 MYPOPQ86VE0 399 aaPredicted RBP8.3□□□□□ -1.08
PTPRD-207ENST00000463477 BOLLQ8N9W6 283 aaKnown RBP8.3□□□□□ -1.08
PTPRD-207ENST00000463477 LFNGQ8NES3 379 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 OR10V1Q8NGI7 309 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 PLPPR1Q8TBJ4 325 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 SLC25A40Q8TBP6 338 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 RDH5Q92781 318 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 LSM10Q969L4 123 aaKnown RBP8.3□□□□□ -1.08
PTPRD-207ENST00000463477 BSCL2Q96G97 398 aaPredicted RBP8.3□□□□□ -1.08
PTPRD-207ENST00000463477 SMIM3Q9BZL3 60 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 TLNRD1Q9H1K6 362 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 HIPK2Q9H2X6 1198 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 SMDT1Q9H4I9 107 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 UBTD1Q9HAC8 227 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 BEX4Q9NWD9 120 aaPredicted RBP8.3□□□□□ -1.08
PTPRD-207ENST00000463477 CACFD1Q9UGQ2 172 aa8.3□□□□□ -1.08
PTPRD-207ENST00000463477 DSCAMO60469 2012 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 ITPR3Q14573 2671 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.29□□□□□ -1.08
PTPRD-207ENST00000463477 FAM74A7A6NL05 159 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 UMAD1C9J7I0 102 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 M0R1B8 84 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 HSPB6O14558 160 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 OR2H2O95918 312 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 IGLV1-44P01699 117 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 CELA3BP08861 270 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 KITLGP21583 273 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 AKR1C2P52895 323 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 NHLH2Q02577 135 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 AKR1C1Q04828 323 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 PSG7Q13046 419 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 MSMO1Q15800 293 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 GUCA2BQ16661 112 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 FAM74A3Q4VXF1 159 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 FAM122CQ6P4D5 195 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 OR1J1Q8NGS3 322 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 CISD1Q9NZ45 108 aaKnown RBP8.29□□□□□ -1.08
PTPRD-207ENST00000463477 KPTNQ9Y664 436 aa8.29□□□□□ -1.08
PTPRD-207ENST00000463477 USF3Q68DE3 2245 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 IGSF23A1L1A6 192 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 K7N7A8 449 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 HSD17B6O14756 317 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 TSPAN15O95858 294 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 CTRB1P17538 263 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 SNCAP37840 140 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 VAMP2P63027 116 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 PAX5Q02548 391 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 SPATA46Q5T0L3 261 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 CTRB2Q6GPI1 263 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 LRRC75A-AS1Q8N1F1 130 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 TMEM252Q8N6L7 170 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 ZBTB34Q8NCN2 500 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 KLF14Q8TD94 323 aaPredicted RBP8.28□□□□□ -1.08
PTPRD-207ENST00000463477 CCL19Q99731 98 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 SCRT1Q9BWW7 348 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 BCL2L14Q9BZR8 327 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 OR51B6Q9H340 312 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 SEBOXQ9HB31 216 aaPredicted RBP8.28□□□□□ -1.08
PTPRD-207ENST00000463477 TAAR3PQ9P1P4 343 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 KIAA2026Q5HYC2 2103 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 RAI1Q7Z5J4 1906 aaPredicted RBP8.28□□□□□ -1.08
PTPRD-207ENST00000463477 VPS13CQ709C8 3753 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 HIVEP1P15822 2718 aa8.28□□□□□ -1.08
PTPRD-207ENST00000463477 IGHV1-18A0A0C4DH31 117 aa8.27□□□□□ -1.08
PTPRD-207ENST00000463477 BTBD17A6NE02 478 aa8.27□□□□□ -1.08
PTPRD-207ENST00000463477 FAM24AA6NFZ4 105 aa8.27□□□□□ -1.08
PTPRD-207ENST00000463477 RNF212BA8MTL3 300 aa8.27□□□□□ -1.08
PTPRD-207ENST00000463477 OVOL3O00110 214 aa8.27□□□□□ -1.08
PTPRD-207ENST00000463477 SIGLEC5O15389 551 aa8.27□□□□□ -1.08
PTPRD-207ENST00000463477 HSPA12AO43301 675 aa8.27□□□□□ -1.08
PTPRD-207ENST00000463477 NXPH2O95156 264 aa8.27□□□□□ -1.08
PTPRD-207ENST00000463477 SFTA3P0C7M3 94 aa8.27□□□□□ -1.08
PTPRD-207ENST00000463477 PAX1P15863 534 aa8.27□□□□□ -1.08
PTPRD-207ENST00000463477 PAX6P26367 422 aa8.27□□□□□ -1.08
PTPRD-207ENST00000463477 CAMLGP49069 296 aa8.27□□□□□ -1.08
PTPRD-207ENST00000463477 POLR2GP62487 172 aaKnown RBP eCLIP8.27□□□□□ -1.08
PTPRD-207ENST00000463477 PEA15Q15121 130 aa8.27□□□□□ -1.08
PTPRD-207ENST00000463477 SMUG1Q53HV7 270 aa8.27□□□□□ -1.08
PTPRD-207ENST00000463477 SLC35E4Q6ICL7 350 aa8.27□□□□□ -1.08
PTPRD-207ENST00000463477 C5orf24Q7Z6I8 188 aa8.27□□□□□ -1.08
PTPRD-207ENST00000463477 NEUROG1Q92886 237 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms