RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 IFNA2P01563 188 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 IFNA21P01568 189 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 APOA2P02652 100 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 IL5P05113 134 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 ZNF735P0CB33 412 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 IGHV4-31P0DP07 118 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 CCL3L1P16619 93 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 AADACP22760 399 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 OMGP23515 440 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 CD1BP29016 333 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 PPP1CCP36873 323 aaKnown RBP6.06□□□□□ -1.44
EPHA4-210ENST00000463446 LGALS7P47929 136 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 MECP2P51608 486 aaKnown RBP6.06□□□□□ -1.44
EPHA4-210ENST00000463446 ZNF137PP52743 207 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 PIGPP57054 158 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 FXYD4P59646 89 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 CYCSP99999 105 aaKnown RBP6.06□□□□□ -1.44
EPHA4-210ENST00000463446 LTC4SQ16873 150 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 HLA-DRB5Q30154 266 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 C4orf46Q504U0 113 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 CT45A1Q5HYN5 189 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 PRAMEF5Q5TYX0 476 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 ZNF626Q68DY1 528 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 ZNF660Q6AZW8 331 aaPredicted RBP6.06□□□□□ -1.44
EPHA4-210ENST00000463446 RBMS3Q6XE24 437 aaKnown RBP6.06□□□□□ -1.44
EPHA4-210ENST00000463446 SLC25A42Q86VD7 318 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 THNSL2Q86YJ6 484 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 TGIF2LXQ8IUE1 241 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 CADM3Q8N126 398 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 PNKDQ8N490 385 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 C11orf42Q8N5U0 333 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 WFDC11Q8NEX6 87 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 OR8H1Q8NGG4 311 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 CT45A3Q8NHU0 189 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 VSTM2AQ8TAG5 236 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 RTN4IP1Q8WWV3 396 aaPredicted RBP6.06□□□□□ -1.44
EPHA4-210ENST00000463446 ASB13Q8WXK3 278 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 MAFIPQ8WZ33 124 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 DACT3Q96B18 629 aaPredicted RBP6.06□□□□□ -1.44
EPHA4-210ENST00000463446 AGMATQ9BSE5 352 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 MS4A7Q9GZW8 240 aaPredicted RBP6.06□□□□□ -1.44
EPHA4-210ENST00000463446 C1RLQ9NZP8 487 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 ZNF581Q9P0T4 197 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 PITPNC1Q9UKF7 332 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 NUP50Q9UKX7 468 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 LRRK2Q5S007 2527 aa6.06□□□□□ -1.44
EPHA4-210ENST00000463446 TRAV39A0A0B4J263 110 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 A0A0B4J2A0 478 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 IGHV1-69DA0A0B4J2H0 117 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 IGKV1-6A0A0C4DH72 117 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 C3orf85A0A1B0GTC6 90 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 A0A1B0GW55 424 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 RBFOX2O43251 390 aaKnown RBP eCLIP6.05□□□□□ -1.44
EPHA4-210ENST00000463446 HPRT1P00492 218 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 IGLV1-47P01700 117 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 IGHV1-69P01742 117 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 TFF1P04155 84 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 FBP1P09467 338 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 DUX4L2P0CJ85 424 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 DUX4L3P0CJ86 424 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 DUX4L4P0CJ87 422 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 DUX4L5P0CJ88 424 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 DUX4L6P0CJ89 424 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 DUX4L7P0CJ90 424 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 MMP9P14780 707 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 AKR1C4P17516 323 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 F2RP25116 425 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 GNRHRP30968 328 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 RBMXP38159 391 aaKnown RBP6.05□□□□□ -1.44
EPHA4-210ENST00000463446 DYNLT3P51808 116 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 ERVK-16P61578 105 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 HOXA4Q00056 320 aaPredicted RBP6.05□□□□□ -1.44
EPHA4-210ENST00000463446 ZNF816Q0VGE8 651 aaPredicted RBP6.05□□□□□ -1.44
EPHA4-210ENST00000463446 HERPUD1Q15011 391 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 AADACL3Q5VUY0 350 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 DUX4L9Q6RFH8 374 aaPredicted RBP6.05□□□□□ -1.44
EPHA4-210ENST00000463446 CCBE1Q6UXH8 406 aaPredicted RBP6.05□□□□□ -1.44
EPHA4-210ENST00000463446 NRARPQ7Z6K4 114 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 FAM219AQ8IW50 185 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 LGI3Q8N145 548 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 Q8N7P7 452 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 OR4C13Q8NGP0 309 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 MARCH1Q8TCQ1 289 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 CHPT1Q8WUD6 406 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 CAPSLQ8WWF8 208 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 LHX4Q969G2 390 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 IL22RA2Q969J5 263 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 TOMM40LQ969M1 308 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 GALNT14Q96FL9 552 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 JMJD8Q96S16 334 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 TMPRSS13Q9BYE2 586 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 MEGF9Q9H1U4 602 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 OR2D2Q9H210 308 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 MMP26Q9NRE1 261 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 NUDT15Q9NV35 164 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 DUX4Q9UBX2 424 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 SHPKQ9UHJ6 478 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 CDC42EP3Q9UKI2 254 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 TBC1D24Q9ULP9 559 aa6.05□□□□□ -1.44
EPHA4-210ENST00000463446 HELZ2Q9BYK8 2649 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms