RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 MRGPRFQ96AM1 343 aa11.26□□□□□ -0.61
PHACTR4-203ENST00000463428 NUP50Q9UKX7 468 aa11.26□□□□□ -0.61
PHACTR4-203ENST00000463428 GAB2Q9UQC2 676 aa11.26□□□□□ -0.61
PHACTR4-203ENST00000463428 SOX21Q9Y651 276 aaPredicted RBP11.26□□□□□ -0.61
PHACTR4-203ENST00000463428 OR5H14A6NHG9 310 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 IGLV2-14P01704 120 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 AMY2AP04746 511 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 IFNA6P05013 189 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 SAA4P35542 130 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 RAB7AP51149 207 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 LUMP51884 338 aaPredicted RBP11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 TSPAN5P62079 268 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 TUSC1Q2TAM9 212 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 MINOS1Q5TGZ0 78 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 C9orf139Q6ZV77 190 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 Q71RC1 249 aaPredicted RBP11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 TEX29Q8N6K0 151 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 BORCS5Q969J3 196 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 MOB3AQ96BX8 217 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 ABHD14BQ96IU4 210 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 ZNF251Q9BRH9 671 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 SLC2A8Q9NY64 477 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 DPM3Q9P2X0 92 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 RNF150Q9ULK6 438 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 TBC1D24Q9ULP9 559 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 TBL2Q9Y4P3 447 aaKnown RBP11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 MINOS1-NBL1R4GNA1 71 aa11.25□□□□□ -0.61
PHACTR4-203ENST00000463428 LINC00854A0A1B0GVQ3 168 aa11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 DISC1C4P0D8 188 aa11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 HTR1DP28221 377 aa11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 BTCP35070 178 aa11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 FAUP35544 74 aaKnown RBP11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 INPP1P49441 399 aa11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 DIAPH2-AS1Q14236 149 aa11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 TMEM17Q86X19 198 aa11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 BCL6BQ8N143 479 aaPredicted RBP11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 LYG1Q8N1E2 194 aa11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 DYNAPQ8N1N2 210 aa11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 OR51S1Q8NGJ8 323 aa11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 OR13C8Q8NGS7 320 aa11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 OR10X1Q8NGY0 326 aa11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 TERB2Q8NHR7 220 aa11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 C5orf30Q96GV9 206 aa11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 C7orf50Q9BRJ6 194 aaKnown RBP11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 FXYD6Q9H0Q3 95 aa11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 GHITMQ9H3K2 345 aa11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 FN1P02751 2386 aaKnown RBP11.24□□□□□ -0.61
PHACTR4-203ENST00000463428 SAA2-SAA4A0A096LPE2 208 aa11.23□□□□□ -0.61
PHACTR4-203ENST00000463428 A0A0U1RQK1 487 aa11.23□□□□□ -0.61
PHACTR4-203ENST00000463428 NAP1L6A6NFF2 107 aa11.23□□□□□ -0.61
PHACTR4-203ENST00000463428 RAB29O14966 203 aa11.23□□□□□ -0.61
PHACTR4-203ENST00000463428 SAA2P0DJI9 122 aaPredicted RBP11.23□□□□□ -0.61
PHACTR4-203ENST00000463428 UCP3P55916 312 aa11.23□□□□□ -0.61
PHACTR4-203ENST00000463428 FXYD4P59646 89 aa11.23□□□□□ -0.61
PHACTR4-203ENST00000463428 TPTE2P1Q5T6R2 138 aa11.23□□□□□ -0.61
PHACTR4-203ENST00000463428 MALSU1Q96EH3 234 aa11.23□□□□□ -0.61
PHACTR4-203ENST00000463428 OR2D2Q9H210 308 aa11.23□□□□□ -0.61
PHACTR4-203ENST00000463428 CCL28Q9NRJ3 127 aa11.23□□□□□ -0.61
PHACTR4-203ENST00000463428 MCUBQ9NWR8 336 aa11.23□□□□□ -0.61
PHACTR4-203ENST00000463428 PIPOXQ9P0Z9 390 aa11.23□□□□□ -0.61
PHACTR4-203ENST00000463428 AMMECR1Q9Y4X0 333 aaPredicted RBP11.23□□□□□ -0.61
PHACTR4-203ENST00000463428 MTORP42345 2549 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 LEUTXA8MZ59 168 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 INAFM1C9JVW0 142 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 EPHA1P21709 976 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 GNRHRP30968 328 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 LGALS4P56470 323 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 HERV-K104P61576 105 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 ASAH1Q13510 395 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 EIF4EBP1Q13541 118 aaPredicted RBP11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 MSMO1Q15800 293 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 SCGB2B2Q4G0G5 96 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 RPL39P5Q59GN2 51 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 ZNF833PQ6ZTB9 187 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 ZNF645Q8N7E2 425 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 SECTM1Q8WVN6 248 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 CREB3L1Q96BA8 519 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 PRRT1Q99946 306 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 SLC5A7Q9GZV3 580 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 MEGF9Q9H1U4 602 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 SDHAF2Q9NX18 166 aa11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 RBM7Q9Y580 266 aaKnown RBP11.22□□□□□ -0.61
PHACTR4-203ENST00000463428 NSD1Q96L73 2696 aaPredicted RBP11.21□□□□□ -0.61
PHACTR4-203ENST00000463428 LYRM1O43325 122 aa11.21□□□□□ -0.61
PHACTR4-203ENST00000463428 HNF1AP20823 631 aa11.21□□□□□ -0.61
PHACTR4-203ENST00000463428 PAX6P26367 422 aa11.21□□□□□ -0.61
PHACTR4-203ENST00000463428 IL3RAP26951 378 aa11.21□□□□□ -0.61
PHACTR4-203ENST00000463428 GPR12P47775 334 aa11.21□□□□□ -0.61
PHACTR4-203ENST00000463428 ZNF816Q0VGE8 651 aaPredicted RBP11.21□□□□□ -0.61
PHACTR4-203ENST00000463428 FAM71F2Q6NXP2 309 aa11.21□□□□□ -0.61
PHACTR4-203ENST00000463428 IDO2Q6ZQW0 420 aa11.21□□□□□ -0.61
PHACTR4-203ENST00000463428 DRAM1Q8N682 238 aa11.21□□□□□ -0.61
PHACTR4-203ENST00000463428 RTN4IP1Q8WWV3 396 aaPredicted RBP11.21□□□□□ -0.61
PHACTR4-203ENST00000463428 TOMM40LQ969M1 308 aa11.21□□□□□ -0.61
PHACTR4-203ENST00000463428 RSRP1Q9BUV0 290 aa11.21□□□□□ -0.61
PHACTR4-203ENST00000463428 MS4A7Q9GZW8 240 aaPredicted RBP11.21□□□□□ -0.61
PHACTR4-203ENST00000463428 PRDM13Q9H4Q3 707 aa11.21□□□□□ -0.61
PHACTR4-203ENST00000463428 SCP2D1Q9UJQ7 156 aa11.21□□□□□ -0.61
PHACTR4-203ENST00000463428 ZNF221Q9UK13 617 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms